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(-) Description

Title :  X-RAY CRYSTAL STRUCTURE PROTEIN SP1951 OF STREPTOCOCCUS PNEUMONIAE. NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET SPR27.
 
Authors :  F. Forouhar, I. Lee, S. M. Vorobiev, R. Xiao, T. B. Acton, G. T. Montelion J. F. Hunt, L. Tong, Northeast Structural Genomics Consortium (N
Date :  19 Mar 04  (Deposition) - 30 Mar 04  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.50
Chains :  Asym./Biol. Unit :  A,B
Keywords :  Structural Genomics, Alpha Beta Protein, Psi, Protein Structure Initiative, Northeast Structural Genomics Consortium, Nesg, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  F. Forouhar, A. Kuzin, J. Seetharaman, I. Lee, W. Zhou, M. Abashidze, Y. Chen, W. Yong, H. Janjua, Y. Fang, D. Wang, K. Cunningham, R. Xiao, T. B. Acton, E. Pichersky, D. F. Klessig, C. W. Porter, G. T. Montelione L. Tong
Functional Insights From Structural Genomics.
J. Struct. Funct. Genom V. 8 37 2007
PubMed-ID: 17588214  |  Reference-DOI: 10.1007/S10969-007-9018-3

(-) Compounds

Molecule 1 - CONSERVED HYPOTHETICAL PROTEIN
    Chains: A, B
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: BL21
    Expression System Strain: BL21(DE3)+MAGIC
    Expression System Taxid: 562
    Expression System Vector Type: PET21
    Gene: SP1951
    Organism Scientific: STREPTOCOCCUS PNEUMONIAE
    Organism Taxid: 170187
    Strain: TIGR4

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit : AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 9)

Asymmetric/Biological Unit (2, 9)
No.NameCountTypeFull Name
1MSE8Mod. Amino AcidSELENOMETHIONINE
2TLA1Ligand/IonL(+)-TARTARIC ACID

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREASN A:12 , SER A:15 , LYS A:16 , THR A:17 , PRO A:88 , GLU A:126 , ASP B:52 , SER B:53 , HOH A:614 , HOH A:630 , HOH A:708 , HOH A:759BINDING SITE FOR RESIDUE TLA A 601

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1SQS)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 1SQS)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1SQS)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 1SQS)

(-) Exons   (0, 0)

(no "Exon" information available for 1SQS)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:232
 aligned with A0A0H2URW2_S | A0A0H2URW2 from UniProtKB/TrEMBL  Length:234

    Alignment length:232
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230  
         A0A0H2URW2_S     1 MNKIFIYAGVRNHNSKTLEYTKRLSSIISSRNNVDISFRTPFNSELEISNSDSEELFKKGIDRQSNADDGGVIKKELLESDIIIISSPVYLQNVSVDTKNFIERIGGWSHLFRLAGKFVVTLDVAESNGSDNVSEYLRDIFSYMGGQILHQVSITNSLKDIAEAQLMEATYKIEDVLEGKIKYKTTDYQERAYQTLKLILENYDSEHFEKMYWEKKRLFEANSLEEWYYVEN 232
               SCOP domains d1sqsa_ A: Hypothetical protein SP1951                                                                                                                                                                                                   SCOP domains
               CATH domains -1sqsA00 A:2-232  [code=3.40.50.360, no name defined]                                                                                                                                                                                    CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeee......hhhhhhhhhhhhhhhhhh..eeeee............hhhhhhhhh........hhhhhhhhhhhh.eeeeeeee.....hhhhhhhhhhhhhhh........eeeeeeee......hhhhhhhhhhhhh..eeeeeeeee.hhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhh....hhhhhhhhhh......hhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1sqs A   1 mNKIFIYAGVRNHNSKTLEYTKRLSSIISSRNNVDISFRTPFNSELEISNSDSEELFKKGIDRQSNADDGGVIKKELLESDIIIISSPVYLQNVSVDTKNFIERIGGWSHLFRLAGKFVVTLDVAESNGSDNVSEYLRDIFSYmGGQILHQVSITNSLKDIAEAQLmEATYKIEDVLEGKIKYKTTDYQERAYQTLKLILENYDSEHFEKmYWEKKRLFEANSLEEWYYVEN 232
                            |       10        20        30        40        50        60        70        80        90       100       110       120       130       140   |   150       160      |170       180       190       200       210|      220       230  
                            |                                                                                                                                            144-MSE                167-MSE                                     211-MSE                 
                            1-MSE                                                                                                                                                                                                                                   


Chain B from PDB  Type:PROTEIN  Length:232
 aligned with A0A0H2URW2_S | A0A0H2URW2 from UniProtKB/TrEMBL  Length:234

    Alignment length:232
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230  
         A0A0H2URW2_S     1 MNKIFIYAGVRNHNSKTLEYTKRLSSIISSRNNVDISFRTPFNSELEISNSDSEELFKKGIDRQSNADDGGVIKKELLESDIIIISSPVYLQNVSVDTKNFIERIGGWSHLFRLAGKFVVTLDVAESNGSDNVSEYLRDIFSYMGGQILHQVSITNSLKDIAEAQLMEATYKIEDVLEGKIKYKTTDYQERAYQTLKLILENYDSEHFEKMYWEKKRLFEANSLEEWYYVEN 232
               SCOP domains d1sqsb_ B: Hypothetical protein SP1951                                                                                                                                                                                                   SCOP domains
               CATH domains -1sqsB00 B:2-232  [code=3.40.50.360, no name defined]                                                                                                                                                                                    CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeee......hhhhhhhhhhhhhhhh....eeeee............hhhhhhhhh...hhhhhhhhhhhhhhhhh.eeeeeeee.....hhhhhhhhhhhhhhh........eeeeeeee......hhhhhhhhhhhhh..eeeeeeeee.....hhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhh....hhhhhhhhhh......hhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1sqs B   1 mNKIFIYAGVRNHNSKTLEYTKRLSSIISSRNNVDISFRTPFNSELEISNSDSEELFKKGIDRQSNADDGGVIKKELLESDIIIISSPVYLQNVSVDTKNFIERIGGWSHLFRLAGKFVVTLDVAESNGSDNVSEYLRDIFSYmGGQILHQVSITNSLKDIAEAQLmEATYKIEDVLEGKIKYKTTDYQERAYQTLKLILENYDSEHFEKmYWEKKRLFEANSLEEWYYVEN 232
                            |       10        20        30        40        50        60        70        80        90       100       110       120       130       140   |   150       160      |170       180       190       200       210|      220       230  
                            1-MSE                                                                                                                                        144-MSE                167-MSE                                     211-MSE
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 2)

Asymmetric/Biological Unit
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (1, 2)

Asymmetric/Biological Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 1SQS)

(-) Gene Ontology  (0, 0)

Asymmetric/Biological Unit(hide GO term definitions)
    (no "Gene Ontology" information available for 1SQS)

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  1sqs
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        A0A0H2URW2_S | A0A0H2URW2: 2oys

(-) Related Entries Specified in the PDB File

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