1S4E - JenaLib

Asymmetric Unit (Jmol Viewer)

Asym. Unit - sites (Jmol Viewer)

Biological Unit 1 (Jmol Viewer)

Biol. Unit 1 - sites (Jmol Viewer)

Biological Unit 2 (Jmol Viewer)

Biological Unit 3 (Jmol Viewer)

Biological Unit 4 (Jmol Viewer)

Biological Unit 5 (Jmol Viewer)

Biological Unit 6 (Jmol Viewer)

Biological Unit 7 (Jmol Viewer)

Biological Unit 8 (Jmol Viewer)

Biological Unit 9 (Jmol Viewer)

Title :   PYROCOCCUS FURIOSUS GALACTOKINASE IN COMPLEX WITH GALACTOSE, ADP AND MAGNESIUM

Authors :   A. Hartley, S. E. Glynn, V. Barynin, P. J. Baker, S. E. Sedelnikova, C. Verhees, D. De Geus, J. Van Der Oost, D. J. Timson, R. J. Reece, D. W. Rice

Date :   16 Jan 04 (Deposition) - 06 Apr 04 (Release) - 24 Feb 09 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.90

Chains :   Asym. Unit : A,B,C,D,E,F,G,H,I
Biol. Unit 1: A  (1x)
Biol. Unit 2: B  (1x)
Biol. Unit 3: C  (1x)
Biol. Unit 4: D  (1x)
Biol. Unit 5: E  (1x)
Biol. Unit 6: F  (1x)
Biol. Unit 7: G  (1x)
Biol. Unit 8: H  (1x)
Biol. Unit 9: I  (1x)

Keywords :   Ghmp Kinase Superfamily, P-Loop, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   A. Hartley, S. E. Glynn, V. Barynin, P. J. Baker, S. E. Sedelnikova, C. Verhees, D. De Geus, J. Van Der Oost, D. J. Timson, R. J. Reece, D. W. Rice
Substrate Specificity And Mechanism From The Structure Of Pyrococcus Furiosus Galactokinase
J. Mol. Biol. V. 337 387 2004
PubMed-ID: 15003454 | Reference-DOI: 10.1016/J.JMB.2004.01.043
(for further references see the PDB file header)

Molecule 1 - GALACTOKINASE
	Chains	:	A, B, C, D, E, F, G, H, I
	EC Number	:	2.7.1.6
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI BL21(DE3)
	Expression System Plasmid	:	PET9D
	Expression System Strain	:	BL21 (DE3)
	Expression System Taxid	:	469008
	Expression System Vector Type	:	PLASMID
	Gene	:	GALK
	Organism Scientific	:	PYROCOCCUS FURIOSUS
	Organism Taxid	:	2261
	Synonym	:	GALACTOSE KINASE

		1	2	3	4	5	6	7	8	9
Asymmetric Unit	:	A	B	C	D	E	F	G	H	I
Biological Unit 1 (1x)	:	A
Biological Unit 2 (1x)	:		B
Biological Unit 3 (1x)	:			C
Biological Unit 4 (1x)	:				D
Biological Unit 5 (1x)	:					E
Biological Unit 6 (1x)	:						F
Biological Unit 7 (1x)	:							G
Biological Unit 8 (1x)	:								H
Biological Unit 9 (1x)	:									I

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (4, 54)

No.	Name	Count	Type	Full Name
1	ADP	9	Ligand/Ion	ADENOSINE-5'-DIPHOSPHATE
2	GLA	9	Ligand/Ion	ALPHA D-GALACTOSE
3	MG	9	Ligand/Ion	MAGNESIUM ION
4	MSE	27	Mod. Amino Acid	SELENOMETHIONINE

Biological Unit 1 (3, 5)

No.	Name	Count	Type	Full Name
1	ADP	1	Ligand/Ion	ADENOSINE-5'-DIPHOSPHATE
2	GLA	1	Ligand/Ion	ALPHA D-GALACTOSE
3	MG	-1	Ligand/Ion	MAGNESIUM ION
4	MSE	3	Mod. Amino Acid	SELENOMETHIONINE

Biological Unit 2 (3, 5)

No.	Name	Count	Type	Full Name
1	ADP	1	Ligand/Ion	ADENOSINE-5'-DIPHOSPHATE
2	GLA	1	Ligand/Ion	ALPHA D-GALACTOSE
3	MG	-1	Ligand/Ion	MAGNESIUM ION
4	MSE	3	Mod. Amino Acid	SELENOMETHIONINE

Biological Unit 3 (3, 5)

No.	Name	Count	Type	Full Name
1	ADP	1	Ligand/Ion	ADENOSINE-5'-DIPHOSPHATE
2	GLA	1	Ligand/Ion	ALPHA D-GALACTOSE
3	MG	-1	Ligand/Ion	MAGNESIUM ION
4	MSE	3	Mod. Amino Acid	SELENOMETHIONINE

Biological Unit 4 (3, 5)

No.	Name	Count	Type	Full Name
1	ADP	1	Ligand/Ion	ADENOSINE-5'-DIPHOSPHATE
2	GLA	1	Ligand/Ion	ALPHA D-GALACTOSE
3	MG	-1	Ligand/Ion	MAGNESIUM ION
4	MSE	3	Mod. Amino Acid	SELENOMETHIONINE

Biological Unit 5 (3, 5)

No.	Name	Count	Type	Full Name
1	ADP	1	Ligand/Ion	ADENOSINE-5'-DIPHOSPHATE
2	GLA	1	Ligand/Ion	ALPHA D-GALACTOSE
3	MG	-1	Ligand/Ion	MAGNESIUM ION
4	MSE	3	Mod. Amino Acid	SELENOMETHIONINE

Biological Unit 6 (3, 5)

No.	Name	Count	Type	Full Name
1	ADP	1	Ligand/Ion	ADENOSINE-5'-DIPHOSPHATE
2	GLA	1	Ligand/Ion	ALPHA D-GALACTOSE
3	MG	-1	Ligand/Ion	MAGNESIUM ION
4	MSE	3	Mod. Amino Acid	SELENOMETHIONINE

Biological Unit 7 (3, 5)

No.	Name	Count	Type	Full Name
1	ADP	1	Ligand/Ion	ADENOSINE-5'-DIPHOSPHATE
2	GLA	1	Ligand/Ion	ALPHA D-GALACTOSE
3	MG	-1	Ligand/Ion	MAGNESIUM ION
4	MSE	3	Mod. Amino Acid	SELENOMETHIONINE

Biological Unit 8 (3, 5)

No.	Name	Count	Type	Full Name
1	ADP	1	Ligand/Ion	ADENOSINE-5'-DIPHOSPHATE
2	GLA	1	Ligand/Ion	ALPHA D-GALACTOSE
3	MG	-1	Ligand/Ion	MAGNESIUM ION
4	MSE	3	Mod. Amino Acid	SELENOMETHIONINE

Biological Unit 9 (3, 5)

No.	Name	Count	Type	Full Name
1	ADP	1	Ligand/Ion	ADENOSINE-5'-DIPHOSPHATE
2	GLA	1	Ligand/Ion	ALPHA D-GALACTOSE
3	MG	-1	Ligand/Ion	MAGNESIUM ION
4	MSE	3	Mod. Amino Acid	SELENOMETHIONINE

Asymmetric Unit (27, 27)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	ARG A:11 , GLU A:17 , HIS A:18 , ASP A:20 , CYS A:147 , GLY A:148 , ASP A:151 , TYR A:200 , GLY A:304 , ALA A:305	BINDING SITE FOR RESIDUE GLA A 500
02	AC2	SOFTWARE	ARG B:11 , GLU B:17 , HIS B:18 , ASP B:20 , CYS B:147 , GLY B:148 , ASP B:151 , TYR B:200 , GLY B:304 , ALA B:305	BINDING SITE FOR RESIDUE GLA B 1500
03	AC3	SOFTWARE	ARG C:11 , GLU C:17 , HIS C:18 , ASP C:20 , CYS C:147 , GLY C:148 , ASP C:151 , TYR C:200 , ALA C:305	BINDING SITE FOR RESIDUE GLA C 2500
04	AC4	SOFTWARE	ARG D:11 , GLU D:17 , HIS D:18 , ASP D:20 , CYS D:147 , GLY D:148 , ASP D:151 , TYR D:200 , ALA D:305	BINDING SITE FOR RESIDUE GLA D 3500
05	AC5	SOFTWARE	ARG E:11 , GLU E:17 , HIS E:18 , ASP E:20 , CYS E:147 , GLY E:148 , LEU E:150 , ASP E:151 , TYR E:200 , ALA E:305	BINDING SITE FOR RESIDUE GLA E 4500
06	AC6	SOFTWARE	ARG F:11 , GLU F:17 , HIS F:18 , ASP F:20 , GLY F:148 , ASP F:151 , TYR F:200 , ALA F:305	BINDING SITE FOR RESIDUE GLA F 5500
07	AC7	SOFTWARE	GLU G:17 , HIS G:18 , ASP G:20 , CYS G:147 , GLY G:148 , TYR G:200 , ALA G:305	BINDING SITE FOR RESIDUE GLA G 6500
08	AC8	SOFTWARE	ARG H:11 , GLU H:17 , HIS H:18 , ASP H:20 , CYS H:147 , GLY H:148 , ASP H:151 , TYR H:200 , ALA H:305	BINDING SITE FOR RESIDUE GLA H 7500
09	AC9	SOFTWARE	ARG I:11 , GLU I:17 , HIS I:18 , ASP I:20 , CYS I:147 , GLY I:148 , ASP I:151 , TYR I:200 , ALA I:305	BINDING SITE FOR RESIDUE GLA I 8500
10	BC1	SOFTWARE	SER A:107 , ADP A:400	BINDING SITE FOR RESIDUE MG A 600
11	BC2	SOFTWARE	SER B:107 , ADP B:1400	BINDING SITE FOR RESIDUE MG B 1600
12	BC3	SOFTWARE	SER C:107 , ADP C:2400	BINDING SITE FOR RESIDUE MG C 2600
13	BC4	SOFTWARE	SER D:107 , ADP D:3400	BINDING SITE FOR RESIDUE MG D 3600
14	BC5	SOFTWARE	SER E:107 , ADP E:4400	BINDING SITE FOR RESIDUE MG E 4600
15	BC6	SOFTWARE	SER F:107 , ADP F:5400	BINDING SITE FOR RESIDUE MG F 5600
16	BC7	SOFTWARE	SER G:107 , ADP G:6400	BINDING SITE FOR RESIDUE MG G 6600
17	BC8	SOFTWARE	SER H:107 , ADP H:7400	BINDING SITE FOR RESIDUE MG H 7600
18	BC9	SOFTWARE	SER I:107 , ADP I:8400	BINDING SITE FOR RESIDUE MG I 8600
19	CC1	SOFTWARE	PHE A:52 , TRP A:69 , TYR A:72 , ILE A:94 , LEU A:100 , GLY A:101 , ALA A:102 , SER A:105 , SER A:106 , SER A:107 , PHE A:110 , MG A:600	BINDING SITE FOR RESIDUE ADP A 400
20	CC2	SOFTWARE	THR B:35 , LEU B:100 , GLY B:101 , ALA B:102 , GLY B:103 , SER B:105 , SER B:106 , SER B:107 , PHE B:110 , MG B:1600	BINDING SITE FOR RESIDUE ADP B 1400
21	CC3	SOFTWARE	SER C:49 , TRP C:69 , TYR C:72 , ILE C:94 , LEU C:100 , GLY C:101 , ALA C:102 , LEU C:104 , SER C:105 , SER C:106 , SER C:107 , MG C:2600	BINDING SITE FOR RESIDUE ADP C 2400
22	CC4	SOFTWARE	SER D:49 , PHE D:52 , TRP D:69 , TYR D:72 , ILE D:94 , LEU D:100 , GLY D:101 , ALA D:102 , GLY D:103 , SER D:105 , SER D:106 , SER D:107 , PHE D:110 , MG D:3600	BINDING SITE FOR RESIDUE ADP D 3400
23	CC5	SOFTWARE	SER E:49 , PHE E:52 , TRP E:69 , TYR E:72 , ILE E:94 , LEU E:100 , GLY E:101 , ALA E:102 , SER E:105 , SER E:106 , SER E:107 , PHE E:110 , MG E:4600	BINDING SITE FOR RESIDUE ADP E 4400
24	CC6	SOFTWARE	SER F:49 , PHE F:52 , TRP F:69 , TYR F:72 , ILE F:94 , LEU F:100 , GLY F:101 , ALA F:102 , GLY F:103 , SER F:105 , SER F:106 , SER F:107 , PHE F:110 , MG F:5600	BINDING SITE FOR RESIDUE ADP F 5400
25	CC7	SOFTWARE	TRP G:69 , SER G:105 , SER G:106 , SER G:107 , MG G:6600	BINDING SITE FOR RESIDUE ADP G 6400
26	CC8	SOFTWARE	SER H:49 , PHE H:52 , TRP H:69 , TYR H:72 , ILE H:94 , LEU H:100 , GLY H:101 , ALA H:102 , GLY H:103 , SER H:105 , SER H:106 , SER H:107 , PHE H:110 , MG H:7600	BINDING SITE FOR RESIDUE ADP H 7400
27	CC9	SOFTWARE	SER I:49 , PHE I:52 , TRP I:69 , TYR I:72 , ILE I:94 , LEU I:100 , GLY I:101 , ALA I:102 , SER I:105 , SER I:106 , SER I:107 , PHE I:110 , MG I:8600	BINDING SITE FOR RESIDUE ADP I 8400

(no "SS Bond" information available for 1S4E)

(no "Cis Peptide Bond" information available for 1S4E)

(no "SAP(SNP)/Variant" information available for 1S4E)

Asymmetric Unit (2, 17)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	GALACTOKINASE	PS00106	Galactokinase signature.	GAL1_PYRFU	10-21	8	A:10-21 B:10-21 C:10-21 D:10-21 E:10-21 F:10-21 H:10-21 I:10-21
2	GHMP_KINASES_ATP	PS00627	GHMP kinases putative ATP-binding domain.	GAL1_PYRFU	98-109	9	A:98-109 B:98-109 C:98-109 D:98-109 E:98-109 F:98-109 G:98-109 H:98-109 I:98-109

Biological Unit 1 (2, 2)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	GALACTOKINASE	PS00106	Galactokinase signature.	GAL1_PYRFU	10-21	1	A:10-21 - - - - - - -
2	GHMP_KINASES_ATP	PS00627	GHMP kinases putative ATP-binding domain.	GAL1_PYRFU	98-109	1	A:98-109 - - - - - - - -

Biological Unit 2 (2, 2)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	GALACTOKINASE	PS00106	Galactokinase signature.	GAL1_PYRFU	10-21	1	- B:10-21 - - - - - -
2	GHMP_KINASES_ATP	PS00627	GHMP kinases putative ATP-binding domain.	GAL1_PYRFU	98-109	1	- B:98-109 - - - - - - -

Biological Unit 3 (2, 2)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	GALACTOKINASE	PS00106	Galactokinase signature.	GAL1_PYRFU	10-21	1	- - C:10-21 - - - - -
2	GHMP_KINASES_ATP	PS00627	GHMP kinases putative ATP-binding domain.	GAL1_PYRFU	98-109	1	- - C:98-109 - - - - - -

Biological Unit 4 (2, 2)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	GALACTOKINASE	PS00106	Galactokinase signature.	GAL1_PYRFU	10-21	1	- - - D:10-21 - - - -
2	GHMP_KINASES_ATP	PS00627	GHMP kinases putative ATP-binding domain.	GAL1_PYRFU	98-109	1	- - - D:98-109 - - - - -

Biological Unit 5 (2, 2)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	GALACTOKINASE	PS00106	Galactokinase signature.	GAL1_PYRFU	10-21	1	- - - - E:10-21 - - -
2	GHMP_KINASES_ATP	PS00627	GHMP kinases putative ATP-binding domain.	GAL1_PYRFU	98-109	1	- - - - E:98-109 - - - -

Biological Unit 6 (2, 2)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	GALACTOKINASE	PS00106	Galactokinase signature.	GAL1_PYRFU	10-21	1	- - - - - F:10-21 - -
2	GHMP_KINASES_ATP	PS00627	GHMP kinases putative ATP-binding domain.	GAL1_PYRFU	98-109	1	- - - - - F:98-109 - - -

Biological Unit 7 (1, 1)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	GALACTOKINASE	PS00106	Galactokinase signature.	GAL1_PYRFU	10-21	0	- - - - - - - -
2	GHMP_KINASES_ATP	PS00627	GHMP kinases putative ATP-binding domain.	GAL1_PYRFU	98-109	1	- - - - - - G:98-109 - -

Biological Unit 8 (2, 2)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	GALACTOKINASE	PS00106	Galactokinase signature.	GAL1_PYRFU	10-21	1	- - - - - - H:10-21 -
2	GHMP_KINASES_ATP	PS00627	GHMP kinases putative ATP-binding domain.	GAL1_PYRFU	98-109	1	- - - - - - - H:98-109 -

Biological Unit 9 (2, 2)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	GALACTOKINASE	PS00106	Galactokinase signature.	GAL1_PYRFU	10-21	1	- - - - - - - I:10-21
2	GHMP_KINASES_ATP	PS00627	GHMP kinases putative ATP-binding domain.	GAL1_PYRFU	98-109	1	- - - - - - - - I:98-109

(no "Exon" information available for 1S4E)

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:337
 aligned with GAL1_PYRFU | Q9HHB6 from UniProtKB/Swiss-Prot  Length:352

    Alignment length:347
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       
           GAL1_PYRFU     5 TVKSPGRVNLIGEHTDYTYGYVMPMAIDLYTIITAEKYDKVQLYSEHFNEEKTFTLDNLTKEGSWIDYVKGVLWVLIQEGYKIGGLKGKITGDLPLGAGLSSSASFEVGILEVLNQLYNLNIDPLKKALLAKKAENEFVGVPCGILDQFAVVFGKKDNVIFLDTQTLQYEYIPFPKDVSVLVFYTGVKRELASSEYAERKRIAEESLRILGKESSKEVTEKDLGKLPPLHRKFFSYIVRENARVLEVRDALKEGDIEKVGKILTTAHWDLAENYRVSCEELDFFVKKAMELGAYGARLTGAGFGGSAIALVDKDKAKTIGDAILREYLAKFSWKAKYFVVKPSDGVG 351
               SCOP domains d1s4ea1 A:5-180 Galactokinase                                                                                                                                                   d1s4ea2 A:181-351 Galactokinase                                                                                                                                             SCOP domains
               CATH domains 1s4eA01 A:5-177  [code=3.30.230.10    , no name de f   in ed]                                                                                                                1s4eA02 A:178-351  [code=3.30.70.890, no name defined]                                                                                                                         CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeee.....hhhhh.ee.eeeeeeeeee.----............-.---..-......hhhhhhhhhhhhhhh........-.eee........hhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhh......hhhhhhhhhh...eeeeee....eeeeee....eeeeeeeeeee..hhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhh...eeee.....eeeeeeeee..hhhhhhhhhhhhhhhhh....eeeee....... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -----GALACTOKINAS----------------------------------------------------------------------------GHMP_KINASES-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1s4e A   5 TVKSPGRVNLIGEHTDYTYGYVmPmAIDLYTIIT----DKVQLYSEHFNE-K---LD-LTKEGSWIDYVKGVLWVLIQEGYKIGGLK-KITGDLPLGAGLSSSASFEVGILEVLNQLYNLNIDPLKKALLAKKAENEFVGVPCGILDQFAVVFGKKDNVIFLDTQTLQYEYIPFPKDVSVLVFYTGVKRELASSEYAERKRIAEESLRILGKESSKEVTEKDLGKLPPLHRKFFSYIVRENARVLEVRDALKEGDIEKVGKILTTAHWDLAENYRVSCEELDFFVKKAmELGAYGARLTGAGFGGSAIALVDKDKAKTIGDAILREYLAKFSWKAKYFVVKPSDGVG 351
                                    14        24  | |   34   |    44        54 |   || 64        74        84      | 94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       
                                                 27-MSE     38   43         54 |  60| |                          91 |                                                                                                                                                                                                     293-MSE                                                      
                                                   29-MSE                     56   61 |                            93                                                                                                                                                                                                                                                                  
                                                                                     63

Chain B from PDB  Type:PROTEIN  Length:310
 aligned with GAL1_PYRFU | Q9HHB6 from UniProtKB/Swiss-Prot  Length:352

    Alignment length:342
                                    17        27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347  
           GAL1_PYRFU     8 SPGRVNLIGEHTDYTYGYVMPMAIDLYTIITAEKYDKVQLYSEHFNEEKTFTLDNLTKEGSWIDYVKGVLWVLIQEGYKIGGLKGKITGDLPLGAGLSSSASFEVGILEVLNQLYNLNIDPLKKALLAKKAENEFVGVPCGILDQFAVVFGKKDNVIFLDTQTLQYEYIPFPKDVSVLVFYTGVKRELASSEYAERKRIAEESLRILGKESSKEVTEKDLGKLPPLHRKFFSYIVRENARVLEVRDALKEGDIEKVGKILTTAHWDLAENYRVSCEELDFFVKKAMELGAYGARLTGAGFGGSAIALVDKDKAKTIGDAILREYLAKFSWKAKYFVVKPSDG 349
               SCOP domains d1s4eb1 B:8-180 Galactokinas     e                                                                                                                                           d1s4eb2 B:181-349 Galactokinase                                                                                                                                           SCOP domains
               CATH domains 1s4eB01 B:8-177,B:344-349  [     code=3.                         30.230.10, no name d efined]                                                                             1s4eB02 B:178-343  [code=3.30.70.890, no name defined]                                                                                                                1s4eB0 CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .eeeee.....hhhhh.ee.eeeeeee.-----....ee.-------------------------hhhhhhhhhhhh.....ee.-...........hhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhh-......hhhhhhhhhh...eeeeee.....eeeee....eeeeeeeeeee..hhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhh....eeee.....eeeeeeeee..hhhhhhhhhhhhhhhhh....eeeee..... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE --GALACTOKINAS----------------------------------------------------------------------------GHMP_KINASES------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 1s4e B   8 SPGRVNLIGEHTDYTYGYVmPmAIDLYT-----KYDKVQL-------------------------VKGVLWVLIQEGYKIGGLKG-ITGDLPLGAGLSSSASFEVGILEVLNQLYNLNIDPLKKALLAKKAENE-VGVPCGILDQFAVVFGKKDNVIFLDTQTLQYEYIPFPKDVSVLVFYTGVKRELASSEYAERKRIAEESLRILGKESSKEVTEKDLGKLPPLHRKFFSYIVRENARVLEVRDALKEGDIEKVGKILTTAHWDLAENYRVSCEELDFFVKKAmELGAYGARLTGAGFGGSAIALVDKDKAKTIGDAILREYLAKFSWKAKYFVVKPSDG 349
                                    17        27 |     | -   |    47         -         -     |  77        87    | | 97       107       117       127       137   | | 147       157       167       177       187       197       207       217       227       237       247       257       267       277       287     | 297       307       317       327       337       347  
                                              27-MSE  35    41    47                        73                 92 |                                            141 |                                                                                                                                                   293-MSE                                                    
                                                29-MSE                                                           94                                              143

Chain C from PDB  Type:PROTEIN  Length:337
 aligned with GAL1_PYRFU | Q9HHB6 from UniProtKB/Swiss-Prot  Length:352

    Alignment length:347
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       
           GAL1_PYRFU     4 ITVKSPGRVNLIGEHTDYTYGYVMPMAIDLYTIITAEKYDKVQLYSEHFNEEKTFTLDNLTKEGSWIDYVKGVLWVLIQEGYKIGGLKGKITGDLPLGAGLSSSASFEVGILEVLNQLYNLNIDPLKKALLAKKAENEFVGVPCGILDQFAVVFGKKDNVIFLDTQTLQYEYIPFPKDVSVLVFYTGVKRELASSEYAERKRIAEESLRILGKESSKEVTEKDLGKLPPLHRKFFSYIVRENARVLEVRDALKEGDIEKVGKILTTAHWDLAENYRVSCEELDFFVKKAMELGAYGARLTGAGFGGSAIALVDKDKAKTIGDAILREYLAKFSWKAKYFVVKPSDGV 350
               SCOP domains d1s4ec1 C:4-180 Galactokinase                                                                                                                                                    d1s4ec2 C:181-350 Galactokinase                                                                                                                                            SCOP domains
               CATH domains 1s4eC01 C:4-177  [code=3.30.230.10, no   name defi ned]                                                                                                                       1s4eC02 C:178-350  [code=3.30.70.890, no name defined]                                                                                                                        CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeeee.....hhhhh.ee.eeeeeeeeeeeee.--.eeeee....-.eee.....-....hhhhhhhhhhhhhhhh.-...eeeeeee........hhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhh......hhhhhhhhhh...eeeeee.....eeeee....eeeeeeeeeee..hhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhh.-hhhhhhhhhhhhhhhhhhh.....-hhhhhhhhhhhh-..eeeee....eeeeeeeee..hhhhhhhh-hhh-........eeeee.ee... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------GALACTOKINAS----------------------------------------------------------------------------GHMP_KINASES------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1s4e C   4 ITVKSPGRVNLIGEHTDYTYGYVmPmAIDLYTIITAEK--KVQLYSEHFN-EKTFTLDNL-KEGSWIDYVKGVLWVLIQEGY-IGGLKGKITGDLPLGAGLSSSASFEVGILEVLNQLYNLNIDPLKKALLAKKAENEFVGVPCGILDQFAVVFGKKDNVIFLDTQTLQYEYIPFPKDVSVLVFYTGVKRELASSEYAERKRIAEESLRILGKESSKEVTEKDLGKLPPLHRKFFSYIVRENARVLEVRDALKE-DIEKVGKILTTAHWDLAENYRVSC-ELDFFVKKAmEL-AYGARLTGAGFGGSAIALVDKDKAKTIGDA-LRE-LAKFSWKAKYFVVKPSDGV 350
                                    13        23   | |  33       | -|       53 |      63 |      73        83 | |    93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253   | | 263       273        |-|      293 | |   303       313       323  | | |333       343       
                                                  27-MSE        41 44       53 |      63 |                  85 |                                                                                                                                                                       257 |                    282 |      293-MSE                          326 | | |                  
                                                    29-MSE                    55        65                    87                                                                                                                                                                         259                      284        295 |                            328 | |                  
                                                                                                                                                                                                                                                                                                                               297                              330 |                  
                                                                                                                                                                                                                                                                                                                                                                  332

Chain D from PDB  Type:PROTEIN  Length:349
 aligned with GAL1_PYRFU | Q9HHB6 from UniProtKB/Swiss-Prot  Length:352

    Alignment length:351
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351 
           GAL1_PYRFU     2 SKITVKSPGRVNLIGEHTDYTYGYVMPMAIDLYTIITAEKYDKVQLYSEHFNEEKTFTLDNLTKEGSWIDYVKGVLWVLIQEGYKIGGLKGKITGDLPLGAGLSSSASFEVGILEVLNQLYNLNIDPLKKALLAKKAENEFVGVPCGILDQFAVVFGKKDNVIFLDTQTLQYEYIPFPKDVSVLVFYTGVKRELASSEYAERKRIAEESLRILGKESSKEVTEKDLGKLPPLHRKFFSYIVRENARVLEVRDALKEGDIEKVGKILTTAHWDLAENYRVSCEELDFFVKKAMELGAYGARLTGAGFGGSAIALVDKDKAKTIGDAILREYLAKFSWKAKYFVVKPSDGVGV 352
               SCOP domains d1s4ed1 D:2-180 Galactokinase                                                                                                                                                      d1s4ed2 D:181-352 Galactokinase                                                                                                                                              SCOP domains
               CATH domains 1s4eD01 D:2-177  [code=3.30.230.10, no name defined]                                                                                                                            1s4eD02 D:178-352  [code=3.30.70.890, no name defined]                                                                                                                          CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeeeeee.....hhhhh.ee.eeeeeeeeeeeeeee..eeeee....eeeee...--.....hhhhhhhhhhhhhhhh....eeeeeeee........hhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhh......hhhhhhhhhh...eeeeee....eeeeee....eeeeeeeeeee..hhhhhhhhhhhhhhhhhhhh........hhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhh...eeee.....eeeeeeeee..hhhhhhhhhhhhhhhhh....eeeee.ee..... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------GALACTOKINAS----------------------------------------------------------------------------GHMP_KINASES--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1s4e D   2 SKITVKSPGRVNLIGEHTDYTYGYVmPmAIDLYTIITAEKYDKVQLYSEHFNEEKTFTLD--TKEGSWIDYVKGVLWVLIQEGYKIGGLKGKITGDLPLGAGLSSSASFEVGILEVLNQLYNLNIDPLKKALLAKKAENEFVGVPCGILDQFAVVFGKKDNVIFLDTQTLQYEYIPFPKDVSVLVFYTGVKRELASSEYAERKRIAEESLRILGKESSKEVTEKDLGKLPPLHRKFFSYIVRENARVLEVRDALKEGDIEKVGKILTTAHWDLAENYRVSCEELDFFVKKAmELGAYGARLTGAGFGGSAIALVDKDKAKTIGDAILREYLAKFSWKAKYFVVKPSDGVGV 352
                                    11        21     | |31        41        51        61  |     71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291 |     301       311       321       331       341       351 
                                                    27-MSE                            61 64                                                                                                                                                                                                                                  293-MSE                                                       
                                                      29-MSE

Chain E from PDB  Type:PROTEIN  Length:346
 aligned with GAL1_PYRFU | Q9HHB6 from UniProtKB/Swiss-Prot  Length:352

    Alignment length:350
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352
           GAL1_PYRFU     3 KITVKSPGRVNLIGEHTDYTYGYVMPMAIDLYTIITAEKYDKVQLYSEHFNEEKTFTLDNLTKEGSWIDYVKGVLWVLIQEGYKIGGLKGKITGDLPLGAGLSSSASFEVGILEVLNQLYNLNIDPLKKALLAKKAENEFVGVPCGILDQFAVVFGKKDNVIFLDTQTLQYEYIPFPKDVSVLVFYTGVKRELASSEYAERKRIAEESLRILGKESSKEVTEKDLGKLPPLHRKFFSYIVRENARVLEVRDALKEGDIEKVGKILTTAHWDLAENYRVSCEELDFFVKKAMELGAYGARLTGAGFGGSAIALVDKDKAKTIGDAILREYLAKFSWKAKYFVVKPSDGVGV 352
               SCOP domains d1s4ee1 E:3-180 Galactokinase                                                                                                                                                     d1s4ee2 E:18 1-352 Galactokinase                                                                                                                                             SCOP domains
               CATH domains 1s4eE01 E:3-177  [code=3.30.230.10, no name defined]                                                                                                                           1s4eE02 E:178-3 52  [code=3.30.70.890, no name defined]                                                                                                                         CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeeeee.....hhhhh.ee.eeeeeeeeeeeeeee..eeeee....eeeee.......-..hhhhhhhhhhhhhhhh....eeeeeeee........hhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhh......hhhhhhhhhh...eeeeee....eeeeee....eeeeeee....-.hhhhhhhhhhhhhhhhhhhhh.......hhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhh...eeee.......eeeeeee..hhhhhhhhhh--.........eeeee........ Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------GALACTOKINAS----------------------------------------------------------------------------GHMP_KINASES--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1s4e E   3 KITVKSPGRVNLIGEHTDYTYGYVmPmAIDLYTIITAEKYDKVQLYSEHFNEEKTFTLDNLTK-GSWIDYVKGVLWVLIQEGYKIGGLKGKITGDLPLGAGLSSSASFEVGILEVLNQLYNLNIDPLKKALLAKKAENEFVGVPCGILDQFAVVFGKKDNVIFLDTQTLQYEYIPFPKDVSVLVFYTGVK-ELASSEYAERKRIAEESLRILGKESSKEVTEKDLGKLPPLHRKFFSYIVRENARVLEVRDALKEGDIEKVGKILTTAHWDLAENYRVSCEELDFFVKKAmELGAYGARLTGAGFGGSAIALVDKDKAKTIGDAIL--YLAKFSWKAKYFVVKPSDGVGV 352
                                    12        22    | | 32        42        52        62  | |   72        82        92       102       112       122       132       142       152       162       172       182       192 |     202       212       222       232       242       252       262       272       282       292|      302       312       322     | 332       342       352
                                                   27-MSE                                65 |                                                                                                                          192 |                                                                                                293-MSE                            328  |                     
                                                     29-MSE                                67                                                                                                                            194                                                                                                                                      331

Chain F from PDB  Type:PROTEIN  Length:351
 aligned with GAL1_PYRFU | Q9HHB6 from UniProtKB/Swiss-Prot  Length:352

    Alignment length:351
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351 
           GAL1_PYRFU     2 SKITVKSPGRVNLIGEHTDYTYGYVMPMAIDLYTIITAEKYDKVQLYSEHFNEEKTFTLDNLTKEGSWIDYVKGVLWVLIQEGYKIGGLKGKITGDLPLGAGLSSSASFEVGILEVLNQLYNLNIDPLKKALLAKKAENEFVGVPCGILDQFAVVFGKKDNVIFLDTQTLQYEYIPFPKDVSVLVFYTGVKRELASSEYAERKRIAEESLRILGKESSKEVTEKDLGKLPPLHRKFFSYIVRENARVLEVRDALKEGDIEKVGKILTTAHWDLAENYRVSCEELDFFVKKAMELGAYGARLTGAGFGGSAIALVDKDKAKTIGDAILREYLAKFSWKAKYFVVKPSDGVGV 352
               SCOP domains d1s4ef1 F:2-180 Galactokinase                                                                                                                                                      d1s4ef2 F:181-352 Galactokinase                                                                                                                                              SCOP domains
               CATH domains 1s4eF01 F:2-177  [code=3.30.230.10, no name defined]                                                                                                                            1s4eF02 F:178-352  [code=3.30.70.890, no name defined]                                                                                                                          CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeeeeee.....hhhhh.ee.eeeeeeeeeeeeeee..eeeee....eeeee..........hhhhhhhhhhhhhhh.....eeeeeeee........hhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhh......hhhhhhhhhh...eeeeee.....eeeee....eeeeeeeeeee.hhhhhhhhhhhhhhhhhhhhhh.......hhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhh...eeee.....eeeeeeeee..hhhhhhhhhhhhhhh......eeeee.ee..... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------GALACTOKINAS----------------------------------------------------------------------------GHMP_KINASES--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1s4e F   2 SKITVKSPGRVNLIGEHTDYTYGYVmPmAIDLYTIITAEKYDKVQLYSEHFNEEKTFTLDNLTKEGSWIDYVKGVLWVLIQEGYKIGGLKGKITGDLPLGAGLSSSASFEVGILEVLNQLYNLNIDPLKKALLAKKAENEFVGVPCGILDQFAVVFGKKDNVIFLDTQTLQYEYIPFPKDVSVLVFYTGVKRELASSEYAERKRIAEESLRILGKESSKEVTEKDLGKLPPLHRKFFSYIVRENARVLEVRDALKEGDIEKVGKILTTAHWDLAENYRVSCEELDFFVKKAmELGAYGARLTGAGFGGSAIALVDKDKAKTIGDAILREYLAKFSWKAKYFVVKPSDGVGV 352
                                    11        21     | |31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291 |     301       311       321       331       341       351 
                                                    27-MSE                                                                                                                                                                                                                                                                   293-MSE                                                       
                                                      29-MSE

Chain G from PDB  Type:PROTEIN  Length:255
 aligned with GAL1_PYRFU | Q9HHB6 from UniProtKB/Swiss-Prot  Length:352

    Alignment length:337
                                    20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       
           GAL1_PYRFU    11 RVNLIGEHTDYTYGYVMPMAIDLYTIITAEKYDKVQLYSEHFNEEKTFTLDNLTKEGSWIDYVKGVLWVLIQEGYKIGGLKGKITGDLPLGAGLSSSASFEVGILEVLNQLYNLNIDPLKKALLAKKAENEFVGVPCGILDQFAVVFGKKDNVIFLDTQTLQYEYIPFPKDVSVLVFYTGVKRELASSEYAERKRIAEESLRILGKESSKEVTEKDLGKLPPLHRKFFSYIVRENARVLEVRDALKEGDIEKVGKILTTAHWDLAENYRVSCEELDFFVKKAMELGAYGARLTGAGFGGSAIALVDKDKAKTIGDAILREYLAKFSWKAKYFVVKPS 347
               SCOP domains d1s4eg1 G:11-179 Galacto                                  kina  se                                                                                                           d1s4eg2 G   :184-347 Galactokinase                                                                                                                                   SCOP domains
               CATH domains 1s4eG01 G:11-177,G:344-3                                  47    [code=3.30.           230     .10,  no nam          e defined]                                         1s    4eG02 G:1   78-343  [code=3.30.70.890, no name defined]                                                                                                         1s4e CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeee...hhhhh.eeeee.....----------------------------------....--hhhhhhh....-----------...-----.....-hhhhhh----------hhhhhhhhhhhhhhhh.---..hhhhhhhhh.---.eeeee.....eeee...----...ee....---hhhhhhhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh-..hhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhh......eee......eee---...-hhhhhhhhhhhhhhhh.....-...... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE GALACTOKINA----------------------------------------------------------------------------GHMP_KINASES---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1s4e G  11 RVNLIGEHTDYTYGYVmPmAIDLY----------------------------------WIDY--GVLWVLIQEGY-----------DLP-----SSSAS-EVGILE----------DPLKKALLAKKAENEFV---CGILDQFAVVFG---NVIFLDTQTLQYEYIPFP----VLVFYTGVK---ASSEYAERKRIAEESLRILGKESSKEVTEKDLGKLPPLHRKFFSYIVRENARVLEVRDAL-EGDIEKVGKILTTAHWDLAENYRVSCEELDFFVKKAmELGAYGARLTGAGFGGSAI---DKD-AKTIGDAILREYLAKFSWKAK-FVVKPS 347
                                    20      | 30   |     -         -         -        70 |  |   80    |    -      | |-    |   |-|    |   -      |130       140  |   |150       | - |     170        |-   |   190 |   | 200       210       220       230       240       250    | |260       270       280       290  |    300       310 |   | 320       330       340 |     
                                           27-MSE 34                                 69 72 75        85          97 |   105 109 |  116        127             143 147        158 162              179  184     192 196                                                        255 |                                 293-MSE            312 316 | |                 340 |     
                                             29-MSE                                                                99         111                                                                                                                                               257                                                          318 |                   342     
                                                                                                                                                                                                                                                                                                                                               320

Chain H from PDB  Type:PROTEIN  Length:347
 aligned with GAL1_PYRFU | Q9HHB6 from UniProtKB/Swiss-Prot  Length:352

    Alignment length:349
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341         
           GAL1_PYRFU     2 SKITVKSPGRVNLIGEHTDYTYGYVMPMAIDLYTIITAEKYDKVQLYSEHFNEEKTFTLDNLTKEGSWIDYVKGVLWVLIQEGYKIGGLKGKITGDLPLGAGLSSSASFEVGILEVLNQLYNLNIDPLKKALLAKKAENEFVGVPCGILDQFAVVFGKKDNVIFLDTQTLQYEYIPFPKDVSVLVFYTGVKRELASSEYAERKRIAEESLRILGKESSKEVTEKDLGKLPPLHRKFFSYIVRENARVLEVRDALKEGDIEKVGKILTTAHWDLAENYRVSCEELDFFVKKAMELGAYGARLTGAGFGGSAIALVDKDKAKTIGDAILREYLAKFSWKAKYFVVKPSDGV 350
               SCOP domains d1s4eh1 H:2-180 Galactokinase                                                                                                                                                      d1s4eh2 H:181-350 Galactokinase                                                                                                                                            SCOP domains
               CATH domains 1s4eH01 H:2-177  [code=3.30.230.10, no na me defined]                                                                                                                           1s4eH02 H:178-350  [code=3.30.70.890, no name defined]                                                                                                                        CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeeeeee.....hhhhh.ee.eeeeeeeeeeeee..-.eeeee....eeeee.....-....hhhhhhhhhhhhhhh......eeeeee.........hhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhh......hhhhhhhhhh...eeeeee....eeeeee....eeeeeeeeeee..hhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhh...eeee.....eeeeeeeee..hhhhhhhhhhhhhhhhh....eeeee...... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------GALACTOKINAS----------------------------------------------------------------------------GHMP_KINASES------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1s4e H   2 SKITVKSPGRVNLIGEHTDYTYGYVmPmAIDLYTIITAEKY-KVQLYSEHFNEEKTFTLDNL-KEGSWIDYVKGVLWVLIQEGYKIGGLKGKITGDLPLGAGLSSSASFEVGILEVLNQLYNLNIDPLKKALLAKKAENEFVGVPCGILDQFAVVFGKKDNVIFLDTQTLQYEYIPFPKDVSVLVFYTGVKRELASSEYAERKRIAEESLRILGKESSKEVTEKDLGKLPPLHRKFFSYIVRENARVLEVRDALKEGDIEKVGKILTTAHWDLAENYRVSCEELDFFVKKAmELGAYGARLTGAGFGGSAIALVDKDKAKTIGDAILREYLAKFSWKAKYFVVKPSDGV 350
                                    11        21     | |31        41| |     51        61 | |    71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291 |     301       311       321       331       341         
                                                    27-MSE         42 |                 63 |                                                                                                                                                                                                                                 293-MSE                                                     
                                                      29-MSE         44                   65

Chain I from PDB  Type:PROTEIN  Length:351
 aligned with GAL1_PYRFU | Q9HHB6 from UniProtKB/Swiss-Prot  Length:352

    Alignment length:351
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351 
           GAL1_PYRFU     2 SKITVKSPGRVNLIGEHTDYTYGYVMPMAIDLYTIITAEKYDKVQLYSEHFNEEKTFTLDNLTKEGSWIDYVKGVLWVLIQEGYKIGGLKGKITGDLPLGAGLSSSASFEVGILEVLNQLYNLNIDPLKKALLAKKAENEFVGVPCGILDQFAVVFGKKDNVIFLDTQTLQYEYIPFPKDVSVLVFYTGVKRELASSEYAERKRIAEESLRILGKESSKEVTEKDLGKLPPLHRKFFSYIVRENARVLEVRDALKEGDIEKVGKILTTAHWDLAENYRVSCEELDFFVKKAMELGAYGARLTGAGFGGSAIALVDKDKAKTIGDAILREYLAKFSWKAKYFVVKPSDGVGV 352
               SCOP domains d1s4ei1 I:2-180 Galactokinase                                                                                                                                                      d1s4ei2 I:181-352 Galactokinase                                                                                                                                              SCOP domains
               CATH domains 1s4eI01 I:2-177  [code=3.30.230.10, no name defined]                                                                                                                            1s4eI02 I:178-352  [code=3.30.70.890, no name defined]                                                                                                                          CATH domains
           Pfam domains (1) GalKase_gal_bdg-1s4eI19 I:2-42           -------------------------------------------------GHMP_kinases_N-1s4eI01 I:92-159                                     -------------------------------------------------------------------------------------------GHMP_kinases_C-1s4eI10 I:251-334                                                    ------------------ Pfam domains (1)
           Pfam domains (2) GalKase_gal_bdg-1s4eI20 I:2-42           -------------------------------------------------GHMP_kinases_N-1s4eI02 I:92-159                                     -------------------------------------------------------------------------------------------GHMP_kinases_C-1s4eI11 I:251-334                                                    ------------------ Pfam domains (2)
           Pfam domains (3) GalKase_gal_bdg-1s4eI21 I:2-42           -------------------------------------------------GHMP_kinases_N-1s4eI03 I:92-159                                     -------------------------------------------------------------------------------------------GHMP_kinases_C-1s4eI12 I:251-334                                                    ------------------ Pfam domains (3)
           Pfam domains (4) GalKase_gal_bdg-1s4eI22 I:2-42           -------------------------------------------------GHMP_kinases_N-1s4eI04 I:92-159                                     -------------------------------------------------------------------------------------------GHMP_kinases_C-1s4eI13 I:251-334                                                    ------------------ Pfam domains (4)
           Pfam domains (5) GalKase_gal_bdg-1s4eI23 I:2-42           -------------------------------------------------GHMP_kinases_N-1s4eI05 I:92-159                                     -------------------------------------------------------------------------------------------GHMP_kinases_C-1s4eI14 I:251-334                                                    ------------------ Pfam domains (5)
           Pfam domains (6) GalKase_gal_bdg-1s4eI24 I:2-42           -------------------------------------------------GHMP_kinases_N-1s4eI06 I:92-159                                     -------------------------------------------------------------------------------------------GHMP_kinases_C-1s4eI15 I:251-334                                                    ------------------ Pfam domains (6)
           Pfam domains (7) GalKase_gal_bdg-1s4eI25 I:2-42           -------------------------------------------------GHMP_kinases_N-1s4eI07 I:92-159                                     -------------------------------------------------------------------------------------------GHMP_kinases_C-1s4eI16 I:251-334                                                    ------------------ Pfam domains (7)
           Pfam domains (8) GalKase_gal_bdg-1s4eI26 I:2-42           -------------------------------------------------GHMP_kinases_N-1s4eI08 I:92-159                                     -------------------------------------------------------------------------------------------GHMP_kinases_C-1s4eI17 I:251-334                                                    ------------------ Pfam domains (8)
           Pfam domains (9) GalKase_gal_bdg-1s4eI27 I:2-42           -------------------------------------------------GHMP_kinases_N-1s4eI09 I:92-159                                     -------------------------------------------------------------------------------------------GHMP_kinases_C-1s4eI18 I:251-334                                                    ------------------ Pfam domains (9)
         Sec.struct. author ..eeeeeeeeeeee...hhhhh.eeeeeeeeeeeeeeeeee..eeeee....eeeee..........hhhhhhhhhhhhhhhh....eeeeeeee........hhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhh......hhhhhhhhhh...eeeeee....eeeeee....eeeeeeeeeee..hhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhh...eeee.....eeeeeeeee..hhhhhhhhhhhhhhhhh....eeeee.ee..... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------GALACTOKINAS----------------------------------------------------------------------------GHMP_KINASES--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1s4e I   2 SKITVKSPGRVNLIGEHTDYTYGYVmPmAIDLYTIITAEKYDKVQLYSEHFNEEKTFTLDNLTKEGSWIDYVKGVLWVLIQEGYKIGGLKGKITGDLPLGAGLSSSASFEVGILEVLNQLYNLNIDPLKKALLAKKAENEFVGVPCGILDQFAVVFGKKDNVIFLDTQTLQYEYIPFPKDVSVLVFYTGVKRELASSEYAERKRIAEESLRILGKESSKEVTEKDLGKLPPLHRKFFSYIVRENARVLEVRDALKEGDIEKVGKILTTAHWDLAENYRVSCEELDFFVKKAmELGAYGARLTGAGFGGSAIALVDKDKAKTIGDAILREYLAKFSWKAKYFVVKPSDGVGV 352
                                    11        21     | |31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291 |     301       311       321       331       341       351 
                                                    27-MSE                                                                                                                                                                                                                                                                   293-MSE                                                       
                                                      29-MSE

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric Unit

Classes(

)

Folds(

)

Superfamilies( (-)

)

Families(

)

Protein Domains( (-)

)

Organisms( (-)

)

Class: Alpha and beta proteins (a+b) (23004)

Fold: Ferredoxin-like (1795)

Superfamily: GHMP Kinase, C-terminal domain (25)

Family: Galactokinase (3)

Protein domain: Galactokinase (3)

Pyrococcus furiosus [TaxId: 2261] (1)

1a	d1s4ea2	A:181-351
1b	d1s4eb2	B:181-349
1c	d1s4ec2	C:181-350
1d	d1s4ed2	D:181-352
1e	d1s4ee2	E:181-352
1f	d1s4ef2	F:181-352
1g	d1s4eg2	G:184-347
1h	d1s4eh2	H:181-350
1i	d1s4ei2	I:181-352

Fold: Ribosomal protein S5 domain 2-like (306)

Superfamily: Ribosomal protein S5 domain 2-like (306)

Family: GHMP Kinase, N-terminal domain (19)

Protein domain: Galactokinase (3)

Pyrococcus furiosus [TaxId: 2261] (1)

2a	d1s4ea1	A:5-180
2b	d1s4eb1	B:8-180
2c	d1s4ec1	C:4-180
2d	d1s4ed1	D:2-180
2e	d1s4ee1	E:3-180
2f	d1s4ef1	F:2-180
2g	d1s4eg1	G:11-179
2h	d1s4eh1	H:2-180
2i	d1s4ei1	I:2-180

Asymmetric Unit

Classes(

)

Architectures( (-)

)

Topologies( (-)

)

Homologous Superfamilies( (-)

)

Organisms( (-)

)

Class: Alpha Beta (26913)

Architecture: 2-Layer Sandwich (8480)

Topology: Alpha-Beta Plaits (1688)

Homologous Superfamily: [code=3.30.70.890, no name defined] (18)

Pyrococcus furiosus. Organism_taxid: 2261. (1)

1a	1s4eG02	G:178-343
1b	1s4eB02	B:178-343
1c	1s4eC02	C:178-350
1d	1s4eE02	E:178-352
1e	1s4eH02	H:178-350
1f	1s4eA02	A:178-351
1g	1s4eD02	D:178-352
1h	1s4eF02	F:178-352
1i	1s4eI02	I:178-352

Topology: Ribosomal Protein S5; domain 2 (189)

Homologous Superfamily: [code=3.30.230.10, no name defined] (170)

Pyrococcus furiosus. Organism_taxid: 2261. (1)

2a	1s4eB01	B:8-177,B:344-349
2b	1s4eA01	A:5-177
2c	1s4eC01	C:4-177
2d	1s4eD01	D:2-177
2e	1s4eE01	E:3-177
2f	1s4eH01	H:2-177
2g	1s4eF01	F:2-177
2h	1s4eI01	I:2-177
2i	1s4eG01	G:11-177,G:344-347

Asymmetric Unit(hide GO term definitions)

Chain A,B,C,D,E,F,G,H,I (GAL1_PYRFU | Q9HHB6)

molecular function
	GO:0005524	ATP binding	Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
	GO:0004335	galactokinase activity	Catalysis of the reaction: D-galactose + ATP = alpha-D-galactose 1-phosphate + ADP + 2 H(+).
	GO:0016301	kinase activity	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule.
	GO:0000287	magnesium ion binding	Interacting selectively and non-covalently with magnesium (Mg) ions.
	GO:0046872	metal ion binding	Interacting selectively and non-covalently with any metal ion.
	GO:0000166	nucleotide binding	Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
	GO:0016773	phosphotransferase activity, alcohol group as acceptor	Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to an alcohol group (acceptor).
	GO:0016740	transferase activity	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.
biological process
	GO:0005975	carbohydrate metabolic process	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
	GO:0046835	carbohydrate phosphorylation	The process of introducing a phosphate group into a carbohydrate, any organic compound based on the general formula Cx(H2O)y.
	GO:0006012	galactose metabolic process	The chemical reactions and pathways involving galactose, the aldohexose galacto-hexose. D-galactose is widely distributed in combined form in plants, animals and microorganisms as a constituent of oligo- and polysaccharides; it also occurs in galactolipids and as its glucoside in lactose and melibiose.
	GO:0008152	metabolic process	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
	GO:0016310	phosphorylation	The process of introducing a phosphate group into a molecule, usually with the formation of a phosphoric ester, a phosphoric anhydride or a phosphoric amide.
cellular component
	GO:0005737	cytoplasm	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

Asymmetric Unit
	Complete Structure
		Jena3D(integrated viewing of ligand, site, SAP, PROSITE, SCOP information)
		WebMol \| AstexViewer[tm]@PDBe (Java Applets, require no local installation except for Java; loading may be slow)
		STRAP (Java WebStart application, automatic local installation, requires Java; full application with system access!)
		RasMol (require local installation)
		Molscript (VRML) (requires installation of a VRML viewer; select preferred view via VRML and generate a mono or stereo PDF format file)

	Ligands, Modified Residues, Ions
		ADP	[ RasMol \| Jena3D ]	+environment [ RasMol \| Jena3D ]
		GLA	[ RasMol \| Jena3D ]	+environment [ RasMol \| Jena3D ]
		MG	[ RasMol \| Jena3D ]	+environment [ RasMol \| Jena3D ]
		MSE	[ RasMol \| Jena3D ]	+environment [ RasMol \| Jena3D ]

	Sites
		AC1	[ RasMol ]	+environment [ RasMol ]
		AC2	[ RasMol ]	+environment [ RasMol ]
		AC3	[ RasMol ]	+environment [ RasMol ]
		AC4	[ RasMol ]	+environment [ RasMol ]
		AC5	[ RasMol ]	+environment [ RasMol ]
		AC6	[ RasMol ]	+environment [ RasMol ]
		AC7	[ RasMol ]	+environment [ RasMol ]
		AC8	[ RasMol ]	+environment [ RasMol ]
		AC9	[ RasMol ]	+environment [ RasMol ]
		BC1	[ RasMol ]	+environment [ RasMol ]
		BC2	[ RasMol ]	+environment [ RasMol ]
		BC3	[ RasMol ]	+environment [ RasMol ]
		BC4	[ RasMol ]	+environment [ RasMol ]
		BC5	[ RasMol ]	+environment [ RasMol ]
		BC6	[ RasMol ]	+environment [ RasMol ]
		BC7	[ RasMol ]	+environment [ RasMol ]
		BC8	[ RasMol ]	+environment [ RasMol ]
		BC9	[ RasMol ]	+environment [ RasMol ]
		CC1	[ RasMol ]	+environment [ RasMol ]
		CC2	[ RasMol ]	+environment [ RasMol ]
		CC3	[ RasMol ]	+environment [ RasMol ]
		CC4	[ RasMol ]	+environment [ RasMol ]
		CC5	[ RasMol ]	+environment [ RasMol ]
		CC6	[ RasMol ]	+environment [ RasMol ]
		CC7	[ RasMol ]	+environment [ RasMol ]
		CC8	[ RasMol ]	+environment [ RasMol ]
		CC9	[ RasMol ]	+environment [ RasMol ]

	Cis Peptide Bonds
(no "Cis Peptide Bonds" information available for 1s4e)

Biological Units
	Complete Structure
		Biological Unit 1	[ Jena3D ]
		Biological Unit 2	[ Jena3D ]
		Biological Unit 3	[ Jena3D ]
		Biological Unit 4	[ Jena3D ]
		Biological Unit 5	[ Jena3D ]
		Biological Unit 6	[ Jena3D ]
		Biological Unit 7	[ Jena3D ]
		Biological Unit 8	[ Jena3D ]
		Biological Unit 9	[ Jena3D ]

Jmol
	protein: cartoon or spacefill or dots and stick; nucleic acid: cartoon and stick; ligands: spacefill; active site: stick [ Asym. Unit PNG format \| Asym. Unit - sites PNG format \| Biol. Unit 1 PNG format \| Biol. Unit 1 - sites PNG format \| Biol. Unit 2 PNG format \| Biol. Unit 3 PNG format \| Biol. Unit 4 PNG format \| Biol. Unit 5 PNG format \| Biol. Unit 6 PNG format \| Biol. Unit 7 PNG format \| Biol. Unit 8 PNG format \| Biol. Unit 9 PNG format ](automatic orientation, automatically generated)
Molscript
	protein, nucleic acid: cartoon; ligands: spacefill; active site: ball and stick [ mono PDF format \| stereo PDF format ](default orientation, automatically generated)

Access by PDB/NDB ID
	1s4e
		Family and Domain Information	:	ProDom \| SYSTERS
		General Structural Information	:	GlycoscienceDB \| MMDB \| NDB \| OCA \| PDB \| PDBe \| PDBj \| PDBsum \| PDBWiki \| PQS \| PROTEOPEDIA
		Orientation in Membranes	:	OPM
		Protein Surface	:	SURFACE
		Secondary Structure	:	DSSP (structure derived) \| HSSP (homology derived)
		Structural Genomics	:	GeneCensus
		Structural Neighbours	:	CE \| VAST
		Structure Classification	:	CATH \| Dali \| SCOP
		Validation and Original Data	:	BMRB Data View \| BMRB Restraints Grid \| EDS \| PROCHECK \| RECOORD \| WHAT_CHECK

Access by UniProt ID/Accession number
	GAL1_PYRFU \| Q9HHB6
		Comparative Protein Structure Models	:	ModBase
		Genomic Information	:	Ensembl
		Protein-protein Interaction	:	DIP
		Sequence, Family and Domain Information	:	InterPro \| Pfam \| SMART \| UniProtKB/SwissProt

Access by Enzyme Classificator (EC Number)
	2.7.1.6
		General Enzyme Information	:	BRENDA \| EC-PDB \| Enzyme \| IntEnz
		Pathway	:	KEGG \| MetaCyc

Access by Disease Identifier (MIM ID)
	(no 'MIM ID' available)
		Disease Information	:	OMIM

Access by GenAge ID
	(no 'GenAge ID' available)
		Age Related Information	:	GenAge

Access by PDB/NDB ID
		Domain Information	:	XDom
		Interatomic Contacts of Structural Units	:	CSU
		Ligand-protein Contacts	:	LPC
		Protein Cavities	:	castP
		Sequence and Secondary Structure	:	PDBCartoon
		Structure Alignment	:	STRAP(Java WebStart application, automatic local installation, requires Java; full application with system access!)
		Structure and Sequence Browser	:	STING

Access by UniProt ID/Accession number
	GAL1_PYRFU \| Q9HHB6
		Protein Disorder Prediction	:	DisEMBL \| FoldIndex \| GLOBPLOT (for more information see DisProt)

(no "Entries Sharing at Least One Protein Chain" available for 1S4E)

(no "Related Entries Specified in the PDB File" available for 1S4E)

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (4, 54)

Sites (27, 27)

SS Bonds (0, 0)

Cis Peptide Bonds (0, 0)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (2, 17)

Exons (0, 0)

Sequences/Alignments

Classification and Annotation

SCOP Domains (2, 18)

CATH Domains (2, 18)

Pfam Domains (3, 27)

Gene Ontology (14, 14)

Visualization

Interactive Views

Still Images

Databases and Analysis Tools

Databases

Analysis Tools

Related Entries

Entries Sharing at Least One Protein Chain (UniProt ID)

Related Entries Specified in the PDB File