1RZ1 - JenaLib

Asymmetric Unit (Jmol Viewer)

Asym. Unit - sites (Jmol Viewer)

Biological Unit 1 (Jmol Viewer)

Biol. Unit 1 - sites (Jmol Viewer)

Biological Unit 2 (Jmol Viewer)

Biological Unit 3 (Jmol Viewer)

Biological Unit 4 (Jmol Viewer)

Title :   REDUCED FLAVIN REDUCTASE PHEA2 IN COMPLEX WITH NAD

Authors :   R. H. Van Den Heuvel, A. H. Westphal, A. J. Heck, M. A. Walsh, S. Rovida, W. J. Van Berkel, A. Mattevi

Date :   23 Dec 03 (Deposition) - 06 Apr 04 (Release) - 24 Feb 09 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.10

Chains :   Asym. Unit : A,B,C,D,E,F,G,H
Biol. Unit 1: A,B  (1x)
Biol. Unit 2: C,D  (1x)
Biol. Unit 3: E,F  (1x)
Biol. Unit 4: G,H  (1x)

Keywords :   Flavin, Nad, Oxidoreductase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   R. H. Van Den Heuvel, A. H. Westphal, A. J. Heck, M. A. Walsh, S. Rovida, W. J. Van Berkel, A. Mattevi
Structural Studies On Flavin Reductase Phea2 Reveal Binding Of Nad In An Unusual Folded Conformation And Support Novel Mechanism Of Action.
J. Biol. Chem. V. 279 12860 2004
PubMed-ID: 14703520 | Reference-DOI: 10.1074/JBC.M313765200
(for further references see the PDB file header)

Molecule 1 - PHENOL 2-HYDROXYLASE COMPONENT B
	Chains	:	A, B, C, D, E, F, G, H
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Taxid	:	562
	Organism Scientific	:	GEOBACILLUS THERMOGLUCOSIDASIUS
	Organism Taxid	:	1426
	Synonym	:	FLAVIN REDUCTASE PHEA2

		1	2	3	4	5	6	7	8
Asymmetric Unit	:	A	B	C	D	E	F	G	H
Biological Unit 1 (1x)	:	A	B
Biological Unit 2 (1x)	:			C	D
Biological Unit 3 (1x)	:					E	F
Biological Unit 4 (1x)	:							G	H

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (3, 64)

No.	Name	Count	Type	Full Name
1	FAD	8	Ligand/Ion	FLAVIN-ADENINE DINUCLEOTIDE
2	MSE	48	Mod. Amino Acid	SELENOMETHIONINE
3	NAD	8	Ligand/Ion	NICOTINAMIDE-ADENINE-DINUCLEOTIDE

Biological Unit 1 (3, 16)

No.	Name	Count	Type	Full Name
1	FAD	2	Ligand/Ion	FLAVIN-ADENINE DINUCLEOTIDE
2	MSE	12	Mod. Amino Acid	SELENOMETHIONINE
3	NAD	2	Ligand/Ion	NICOTINAMIDE-ADENINE-DINUCLEOTIDE

Biological Unit 2 (3, 16)

No.	Name	Count	Type	Full Name
1	FAD	2	Ligand/Ion	FLAVIN-ADENINE DINUCLEOTIDE
2	MSE	12	Mod. Amino Acid	SELENOMETHIONINE
3	NAD	2	Ligand/Ion	NICOTINAMIDE-ADENINE-DINUCLEOTIDE

Biological Unit 3 (3, 16)

No.	Name	Count	Type	Full Name
1	FAD	2	Ligand/Ion	FLAVIN-ADENINE DINUCLEOTIDE
2	MSE	12	Mod. Amino Acid	SELENOMETHIONINE
3	NAD	2	Ligand/Ion	NICOTINAMIDE-ADENINE-DINUCLEOTIDE

Biological Unit 4 (3, 16)

No.	Name	Count	Type	Full Name
1	FAD	2	Ligand/Ion	FLAVIN-ADENINE DINUCLEOTIDE
2	MSE	12	Mod. Amino Acid	SELENOMETHIONINE
3	NAD	2	Ligand/Ion	NICOTINAMIDE-ADENINE-DINUCLEOTIDE

Asymmetric Unit (16, 16)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	VAL A:28 , GLY A:30 , MSE A:31 , THR A:32 , ALA A:33 , ASN A:34 , ALA A:35 , SER A:49 , ILE A:50 , GLY A:51 , ALA A:54 , LYS A:55 , MSE A:56 , ASN A:81 , PHE A:82 , ALA A:83 , GLY A:84 , PRO A:89 , VAL A:90 , NAD A:1201 , HOH A:1218 , HOH A:1241 , HOH A:1245 , HOH A:1251	BINDING SITE FOR RESIDUE FAD A 1200
02	AC2	SOFTWARE	ARG A:7 , MSE A:10 , GLY A:11 , ASN A:34 , ALA A:35 , HIS A:123 , PHE A:143 , FAD A:1200 , HOH A:1206 , HOH A:1211 , HOH A:1221 , HOH A:1243 , SER B:38	BINDING SITE FOR RESIDUE NAD A 1201
03	AC3	SOFTWARE	VAL B:28 , GLY B:30 , MSE B:31 , THR B:32 , ALA B:33 , ASN B:34 , ALA B:35 , SER B:49 , ILE B:50 , GLY B:51 , ALA B:54 , LYS B:55 , MSE B:56 , ASN B:81 , PHE B:82 , ALA B:83 , GLY B:84 , PRO B:89 , VAL B:90 , NAD B:2201 , HOH B:2207	BINDING SITE FOR RESIDUE FAD B 2200
04	AC4	SOFTWARE	SER A:38 , HOH A:1205 , ARG B:7 , MSE B:10 , GLY B:11 , ASN B:34 , ALA B:35 , HIS B:123 , PHE B:143 , FAD B:2200 , HOH B:2216 , HOH B:2246 , HOH B:2247	BINDING SITE FOR RESIDUE NAD B 2201
05	AC5	SOFTWARE	VAL C:28 , GLY C:30 , MSE C:31 , THR C:32 , ALA C:33 , ASN C:34 , ALA C:35 , SER C:49 , ILE C:50 , GLY C:51 , ALA C:54 , LYS C:55 , MSE C:56 , ASN C:81 , PHE C:82 , ALA C:83 , GLY C:84 , PRO C:89 , VAL C:90 , NAD C:3201 , HOH C:3221 , HOH C:3247	BINDING SITE FOR RESIDUE FAD C 3200
06	AC6	SOFTWARE	ARG C:7 , MSE C:10 , GLY C:11 , ASN C:34 , ALA C:35 , HIS C:123 , PHE C:143 , FAD C:3200 , HOH C:3206 , HOH C:3231 , HOH C:3232 , HOH C:3233 , HOH C:3235 , HOH C:3239 , HOH C:3248 , HOH C:3251 , SER D:38 , VAL D:39	BINDING SITE FOR RESIDUE NAD C 3201
07	AC7	SOFTWARE	VAL D:28 , GLY D:30 , MSE D:31 , THR D:32 , ALA D:33 , ASN D:34 , ALA D:35 , SER D:49 , GLY D:51 , ALA D:54 , LYS D:55 , MSE D:56 , ASN D:81 , PHE D:82 , ALA D:83 , GLY D:84 , PRO D:89 , VAL D:90 , NAD D:4201 , HOH D:4204 , HOH D:4243	BINDING SITE FOR RESIDUE FAD D 4200
08	AC8	SOFTWARE	SER C:38 , VAL C:39 , HOH C:3217 , ARG D:7 , MSE D:10 , GLY D:11 , ASN D:34 , ALA D:35 , HIS D:123 , PHE D:143 , FAD D:4200 , HOH D:4210 , HOH D:4215 , HOH D:4223 , HOH D:4227 , HOH D:4239 , HOH D:4246	BINDING SITE FOR RESIDUE NAD D 4201
09	AC9	SOFTWARE	VAL E:28 , GLY E:30 , MSE E:31 , THR E:32 , ALA E:33 , ASN E:34 , ALA E:35 , SER E:49 , GLY E:51 , ALA E:54 , LYS E:55 , MSE E:56 , ASN E:81 , PHE E:82 , ALA E:83 , GLY E:84 , PRO E:89 , VAL E:90 , NAD E:5201 , HOH E:5209 , HOH E:5214 , HOH E:5217	BINDING SITE FOR RESIDUE FAD E 5200
10	BC1	SOFTWARE	ARG E:7 , MSE E:10 , GLY E:11 , ASN E:34 , ALA E:35 , HIS E:123 , PHE E:143 , FAD E:5200 , HOH E:5208 , HOH E:5225 , SER F:38 , HOH F:6207	BINDING SITE FOR RESIDUE NAD E 5201
11	BC2	SOFTWARE	VAL F:28 , GLY F:30 , MSE F:31 , THR F:32 , ALA F:33 , ASN F:34 , ALA F:35 , SER F:49 , GLY F:51 , ALA F:54 , LYS F:55 , MSE F:56 , ASN F:81 , PHE F:82 , ALA F:83 , GLY F:84 , PRO F:89 , VAL F:90 , NAD F:6201 , HOH F:6206 , HOH F:6227	BINDING SITE FOR RESIDUE FAD F 6200
12	BC3	SOFTWARE	SER E:38 , VAL E:39 , ARG F:7 , MSE F:10 , GLY F:11 , ASN F:34 , ALA F:35 , HIS F:123 , PHE F:143 , FAD F:6200 , HOH F:6205 , HOH F:6210 , HOH F:6212 , HOH F:6242	BINDING SITE FOR RESIDUE NAD F 6201
13	BC4	SOFTWARE	VAL G:28 , GLY G:30 , MSE G:31 , THR G:32 , ALA G:33 , ASN G:34 , ALA G:35 , SER G:49 , ILE G:50 , GLY G:51 , ALA G:54 , LYS G:55 , MSE G:56 , ASN G:81 , PHE G:82 , ALA G:83 , GLY G:84 , PRO G:89 , VAL G:90 , NAD G:7201 , HOH G:7208 , HOH G:7230 , HOH G:7245	BINDING SITE FOR RESIDUE FAD G 7200
14	BC5	SOFTWARE	ARG G:7 , MSE G:10 , GLY G:11 , ASN G:34 , ALA G:35 , HIS G:123 , PHE G:143 , FAD G:7200 , HOH G:7214 , HOH G:7216 , HOH G:7218 , HOH G:7227 , SER H:38 , HOH H:8203	BINDING SITE FOR RESIDUE NAD G 7201
15	BC6	SOFTWARE	VAL H:28 , GLY H:30 , MSE H:31 , THR H:32 , ALA H:33 , ASN H:34 , ALA H:35 , SER H:49 , ILE H:50 , GLY H:51 , ALA H:54 , LYS H:55 , MSE H:56 , ASN H:81 , PHE H:82 , ALA H:83 , GLY H:84 , PRO H:89 , VAL H:90 , NAD H:8201 , HOH H:8228	BINDING SITE FOR RESIDUE FAD H 8200
16	BC7	SOFTWARE	SER G:38 , HOH G:7203 , ARG H:7 , MSE H:10 , GLY H:11 , ASN H:34 , ALA H:35 , HIS H:123 , PHE H:143 , FAD H:8200 , HOH H:8229 , HOH H:8241 , HOH H:8243	BINDING SITE FOR RESIDUE NAD H 8201

(no "SS Bond" information available for 1RZ1)

Asymmetric Unit

No.	Residues
1	Asn A:42	-	Pro A:43
2	Asn B:42	-	Pro B:43
3	Asn C:42	-	Pro C:43
4	Asn D:42	-	Pro D:43
5	Asn E:42	-	Pro E:43
6	Asn F:42	-	Pro F:43
7	Asn G:42	-	Pro G:43
8	Asn H:42	-	Pro H:43

(no "SAP(SNP)/Variant" information available for 1RZ1)

(no "PROSITE Motif" information available for 1RZ1)

(no "Exon" information available for 1RZ1)

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:153
 aligned with Q9LAG2_GEOTM | Q9LAG2 from UniProtKB/TrEMBL  Length:161

    Alignment length:153
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150   
         Q9LAG2_GEOTM     1 MDDRLFRNAMGKFATGVTVITTELNGAVHGMTANAFMSVSLNPKLVLVSIGEKAKMLEKIQQSKKYAVNILSQDQKVLSMNFAGQLEKPVDVQFEELGGLPVIKDALAQISCQVVNEVQAGDHTLFIGEVTDIKITEQDPLLFFSGKYHQLAQ 153
               SCOP domains d1rz1a_ A: Phenol 2-hydroxylase component B (PheA2)                                                                                                       SCOP domains
               CATH domains -1rz1A00 A:2-153 Electron Transport, Fmn-binding Protein; Chain A                                                                                         CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhh......eeeeeee..eeeeeee..eeeee....eeeeeee..hhhhhhhhhhheeeeee.hhhhhhhhhhh...........eeee..eeee....eeeeeeeeeeeee..eeeeeeeeeeeee......eee..eee.... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1rz1 A   1 mDDRLFRNAmGKFATGVTVITTELNGAVHGmTANAFmSVSLNPKLVLVSIGEKAKmLEKIQQSKKYAVNILSQDQKVLSmNFAGQLEKPVDVQFEELGGLPVIKDALAQISCQVVNEVQAGDHTLFIGEVTDIKITEQDPLLFFSGKYHQLAQ 153
                            |       10        20        30|     | 40        50     |  60        70        80        90       100       110       120       130       140       150   
                            |       10-MSE               31-MSE |                 56-MSE                  80-MSE                                                                     
                            1-MSE                              37-MSE

Chain B from PDB  Type:PROTEIN  Length:153
 aligned with Q9LAG2_GEOTM | Q9LAG2 from UniProtKB/TrEMBL  Length:161

    Alignment length:153
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150   
         Q9LAG2_GEOTM     1 MDDRLFRNAMGKFATGVTVITTELNGAVHGMTANAFMSVSLNPKLVLVSIGEKAKMLEKIQQSKKYAVNILSQDQKVLSMNFAGQLEKPVDVQFEELGGLPVIKDALAQISCQVVNEVQAGDHTLFIGEVTDIKITEQDPLLFFSGKYHQLAQ 153
               SCOP domains d1rz1b_ B: Phenol 2-hydroxylase component B (PheA2)                                                                                                       SCOP domains
               CATH domains -1rz1B00 B:2-153 Electron Transport, Fmn-binding Protein; Chain A                                                                                         CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhh...ee.eeeeeee..eeeeeee..eeeee....eeeeeee..hhhhhhhhhhheeeeee....hhhhhhhh...........eeee..eeee....eeeeeeeeeeeee..eeeeeeeeeeeee......eee..eee.... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1rz1 B   1 mDDRLFRNAmGKFATGVTVITTELNGAVHGmTANAFmSVSLNPKLVLVSIGEKAKmLEKIQQSKKYAVNILSQDQKVLSmNFAGQLEKPVDVQFEELGGLPVIKDALAQISCQVVNEVQAGDHTLFIGEVTDIKITEQDPLLFFSGKYHQLAQ 153
                            |       10        20        30|     | 40        50     |  60        70        80        90       100       110       120       130       140       150   
                            1-MSE   10-MSE               31-MSE |                 56-MSE                  80-MSE                                                                     
                                                               37-MSE

Chain C from PDB  Type:PROTEIN  Length:153
 aligned with Q9LAG2_GEOTM | Q9LAG2 from UniProtKB/TrEMBL  Length:161

    Alignment length:153
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150   
         Q9LAG2_GEOTM     1 MDDRLFRNAMGKFATGVTVITTELNGAVHGMTANAFMSVSLNPKLVLVSIGEKAKMLEKIQQSKKYAVNILSQDQKVLSMNFAGQLEKPVDVQFEELGGLPVIKDALAQISCQVVNEVQAGDHTLFIGEVTDIKITEQDPLLFFSGKYHQLAQ 153
               SCOP domains d1rz1c_ C: Phenol 2-hydroxylase component B (PheA2)                                                                                                       SCOP domains
               CATH domains -1rz1C00 C:2-153 Electron Transport, Fmn-binding Protein; Chain A                                                                                         CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhh...ee.eeeeeee..eeeeeee..eeeee....eeeeeee..hhhhhhhhhhheeeeee....hhhhhhhh...........eeee..eeee....eeeeeeeeeeeee..eeeeeeeeeeeee......eee..eee.... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1rz1 C   1 mDDRLFRNAmGKFATGVTVITTELNGAVHGmTANAFmSVSLNPKLVLVSIGEKAKmLEKIQQSKKYAVNILSQDQKVLSmNFAGQLEKPVDVQFEELGGLPVIKDALAQISCQVVNEVQAGDHTLFIGEVTDIKITEQDPLLFFSGKYHQLAQ 153
                            |       10        20        30|     | 40        50     |  60        70        80        90       100       110       120       130       140       150   
                            1-MSE   10-MSE               31-MSE |                 56-MSE                  80-MSE                                                                     
                                                               37-MSE

Chain D from PDB  Type:PROTEIN  Length:153
 aligned with Q9LAG2_GEOTM | Q9LAG2 from UniProtKB/TrEMBL  Length:161

    Alignment length:153
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150   
         Q9LAG2_GEOTM     1 MDDRLFRNAMGKFATGVTVITTELNGAVHGMTANAFMSVSLNPKLVLVSIGEKAKMLEKIQQSKKYAVNILSQDQKVLSMNFAGQLEKPVDVQFEELGGLPVIKDALAQISCQVVNEVQAGDHTLFIGEVTDIKITEQDPLLFFSGKYHQLAQ 153
               SCOP domains d1rz1d_ D: Phenol 2-hydroxylase component B (PheA2)                                                                                                       SCOP domains
               CATH domains -1rz1D00 D:2-153 Electron Transport, Fmn-binding Protein; Chain A                                                                                         CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhh...ee.eeeeeee..eeeeeee..eeeee....eeeeeee..hhhhhhhhhhheeeeee....hhhhhhhh...........eeee..eeee....eeeeeeeeeeeee..eeeeeeeeeeeee......eee..eee.... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1rz1 D   1 mDDRLFRNAmGKFATGVTVITTELNGAVHGmTANAFmSVSLNPKLVLVSIGEKAKmLEKIQQSKKYAVNILSQDQKVLSmNFAGQLEKPVDVQFEELGGLPVIKDALAQISCQVVNEVQAGDHTLFIGEVTDIKITEQDPLLFFSGKYHQLAQ 153
                            |       10        20        30|     | 40        50     |  60        70        80        90       100       110       120       130       140       150   
                            1-MSE   10-MSE               31-MSE |                 56-MSE                  80-MSE                                                                     
                                                               37-MSE

Chain E from PDB  Type:PROTEIN  Length:153
 aligned with Q9LAG2_GEOTM | Q9LAG2 from UniProtKB/TrEMBL  Length:161

    Alignment length:153
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150   
         Q9LAG2_GEOTM     1 MDDRLFRNAMGKFATGVTVITTELNGAVHGMTANAFMSVSLNPKLVLVSIGEKAKMLEKIQQSKKYAVNILSQDQKVLSMNFAGQLEKPVDVQFEELGGLPVIKDALAQISCQVVNEVQAGDHTLFIGEVTDIKITEQDPLLFFSGKYHQLAQ 153
               SCOP domains d1rz1e_ E: Phenol 2-hydroxylase component B (PheA2)                                                                                                       SCOP domains
               CATH domains -1rz1E00 E:2-153 Electron Transport, Fmn-binding Protein; Chain A                                                                                         CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhh...ee.eeeeeee..eeeeeee..eeeee....eeeeeee..hhhhhhhhhhheeeeee....hhhhhhhh...........eeee..eeee....eeeeeeeeeeeee..eeeeeeeeeeeee......eee..eee.... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1rz1 E   1 mDDRLFRNAmGKFATGVTVITTELNGAVHGmTANAFmSVSLNPKLVLVSIGEKAKmLEKIQQSKKYAVNILSQDQKVLSmNFAGQLEKPVDVQFEELGGLPVIKDALAQISCQVVNEVQAGDHTLFIGEVTDIKITEQDPLLFFSGKYHQLAQ 153
                            |       10        20        30|     | 40        50     |  60        70        80        90       100       110       120       130       140       150   
                            1-MSE   10-MSE               31-MSE |                 56-MSE                  80-MSE                                                                     
                                                               37-MSE

Chain F from PDB  Type:PROTEIN  Length:153
 aligned with Q9LAG2_GEOTM | Q9LAG2 from UniProtKB/TrEMBL  Length:161

    Alignment length:153
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150   
         Q9LAG2_GEOTM     1 MDDRLFRNAMGKFATGVTVITTELNGAVHGMTANAFMSVSLNPKLVLVSIGEKAKMLEKIQQSKKYAVNILSQDQKVLSMNFAGQLEKPVDVQFEELGGLPVIKDALAQISCQVVNEVQAGDHTLFIGEVTDIKITEQDPLLFFSGKYHQLAQ 153
               SCOP domains d1rz1f_ F: Phenol 2-hydroxylase component B (PheA2)                                                                                                       SCOP domains
               CATH domains -1rz1F00 F:2-153 Electron Transport, Fmn-binding Protein; Chain A                                                                                         CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhh.....eeeeeee..eeeeeee..eeeee....eeeeeee..hhhhhhhhhhheeeeee....hhhhhhhh...........eeee..eeee....eeeeeeeeeeeee..eeeeeeeeeeeee......eee..eee.... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1rz1 F   1 mDDRLFRNAmGKFATGVTVITTELNGAVHGmTANAFmSVSLNPKLVLVSIGEKAKmLEKIQQSKKYAVNILSQDQKVLSmNFAGQLEKPVDVQFEELGGLPVIKDALAQISCQVVNEVQAGDHTLFIGEVTDIKITEQDPLLFFSGKYHQLAQ 153
                            |       10        20        30|     | 40        50     |  60        70        80        90       100       110       120       130       140       150   
                            1-MSE   10-MSE               31-MSE |                 56-MSE                  80-MSE                                                                     
                                                               37-MSE

Chain G from PDB  Type:PROTEIN  Length:153
 aligned with Q9LAG2_GEOTM | Q9LAG2 from UniProtKB/TrEMBL  Length:161

    Alignment length:153
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150   
         Q9LAG2_GEOTM     1 MDDRLFRNAMGKFATGVTVITTELNGAVHGMTANAFMSVSLNPKLVLVSIGEKAKMLEKIQQSKKYAVNILSQDQKVLSMNFAGQLEKPVDVQFEELGGLPVIKDALAQISCQVVNEVQAGDHTLFIGEVTDIKITEQDPLLFFSGKYHQLAQ 153
               SCOP domains d1rz1g_ G: Phenol 2-hydroxylase component B (PheA2)                                                                                                       SCOP domains
               CATH domains -1rz1G00 G:2-153 Electron Transport, Fmn-binding Protein; Chain A                                                                                         CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhh...ee.eeeeeee..eeeeeee..eeeee....eeeeeee..hhhhhhhhhhheeeeee....hhhhhhhhh..........eeee..eeee....eeeeeeeeeeeee..eeeeeeeeeeeee......eee..eee.... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1rz1 G   1 mDDRLFRNAmGKFATGVTVITTELNGAVHGmTANAFmSVSLNPKLVLVSIGEKAKmLEKIQQSKKYAVNILSQDQKVLSmNFAGQLEKPVDVQFEELGGLPVIKDALAQISCQVVNEVQAGDHTLFIGEVTDIKITEQDPLLFFSGKYHQLAQ 153
                            |       10        20        30|     | 40        50     |  60        70        80        90       100       110       120       130       140       150   
                            1-MSE   10-MSE               31-MSE |                 56-MSE                  80-MSE                                                                     
                                                               37-MSE

Chain H from PDB  Type:PROTEIN  Length:153
 aligned with Q9LAG2_GEOTM | Q9LAG2 from UniProtKB/TrEMBL  Length:161

    Alignment length:153
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150   
         Q9LAG2_GEOTM     1 MDDRLFRNAMGKFATGVTVITTELNGAVHGMTANAFMSVSLNPKLVLVSIGEKAKMLEKIQQSKKYAVNILSQDQKVLSMNFAGQLEKPVDVQFEELGGLPVIKDALAQISCQVVNEVQAGDHTLFIGEVTDIKITEQDPLLFFSGKYHQLAQ 153
               SCOP domains d1rz1h_ H: Phenol 2-hydroxylase component B (PheA2)                                                                                                       SCOP domains
               CATH domains -1rz1H00 H:2-153 Electron Transport, Fmn-binding Protein; Chain A                                                                                         CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhh...ee.eeeeeee..eeeeeee..eeeee....eeeeeee..hhhhhhhhhhheeeeee....hhhhhhhhh..........eeee..eeee....eeeeeeeeeeeee..eeeeeeeeeeeee......eee..eee.... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1rz1 H   1 mDDRLFRNAmGKFATGVTVITTELNGAVHGmTANAFmSVSLNPKLVLVSIGEKAKmLEKIQQSKKYAVNILSQDQKVLSmNFAGQLEKPVDVQFEELGGLPVIKDALAQISCQVVNEVQAGDHTLFIGEVTDIKITEQDPLLFFSGKYHQLAQ 153
                            |       10        20        30|     | 40        50     |  60        70        80        90       100       110       120       130       140       150   
                            1-MSE   10-MSE               31-MSE |                 56-MSE                  80-MSE                                                                     
                                                               37-MSE

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric Unit

Classes(

)

Folds(

)

Superfamilies( (-)

)

Families(

)

Protein Domains( (-)

)

Organisms( (-)

)

Class: All beta proteins (24004)

Fold: Split barrel-like (99)

Superfamily: FMN-binding split barrel (90)

Family: NADH:FMN oxidoreductase-like (9)

Protein domain: Phenol 2-hydroxylase component B (PheA2) (2)

Geobacillus thermoglucosidasius [TaxId: 1426] (2)

1a	d1rz1a_	A:
1b	d1rz1b_	B:
1c	d1rz1c_	C:
1d	d1rz1d_	D:
1e	d1rz1e_	E:
1f	d1rz1f_	F:
1g	d1rz1g_	G:
1h	d1rz1h_	H:

Asymmetric Unit

Classes(

)

Architectures( (-)

)

Topologies( (-)

)

Homologous Superfamilies( (-)

)

Organisms( (-)

)

Class: Mainly Beta (13760)

Architecture: Roll (1513)

Topology: Pnp Oxidase; Chain A (68)

Homologous Superfamily: Electron Transport, Fmn-binding Protein; Chain A (67)

Geobacillus thermoglucosidasius. Organism_taxid: 1426. (2)

1a	1rz1A00	A:2-153
1b	1rz1B00	B:2-153
1c	1rz1C00	C:2-153
1d	1rz1D00	D:2-153
1e	1rz1E00	E:2-153
1f	1rz1F00	F:2-153
1g	1rz1G00	G:2-153
1h	1rz1H00	H:2-153

(no "Pfam Domain" information available for 1RZ1)

Asymmetric Unit(hide GO term definitions)

Chain A,B,C,D,E,F,G,H (Q9LAG2_GEOTM | Q9LAG2)

molecular function
	GO:0010181	FMN binding	Interacting selectively and non-covalently with flavin mono nucleotide. Flavin mono nucleotide (FMN) is the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes.
	GO:0000166	nucleotide binding	Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
	GO:0016491	oxidoreductase activity	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
biological process
	GO:0055114	oxidation-reduction process	A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.

Asymmetric Unit
	Complete Structure
		Jena3D(integrated viewing of ligand, site, SAP, PROSITE, SCOP information)
		WebMol \| AstexViewer[tm]@PDBe (Java Applets, require no local installation except for Java; loading may be slow)
		STRAP (Java WebStart application, automatic local installation, requires Java; full application with system access!)
		RasMol (require local installation)
		Molscript (VRML) (requires installation of a VRML viewer; select preferred view via VRML and generate a mono or stereo PDF format file)

	Ligands, Modified Residues, Ions
		FAD	[ RasMol \| Jena3D ]	+environment [ RasMol \| Jena3D ]
		MSE	[ RasMol \| Jena3D ]	+environment [ RasMol \| Jena3D ]
		NAD	[ RasMol \| Jena3D ]	+environment [ RasMol \| Jena3D ]

	Sites
		AC1	[ RasMol ]	+environment [ RasMol ]
		AC2	[ RasMol ]	+environment [ RasMol ]
		AC3	[ RasMol ]	+environment [ RasMol ]
		AC4	[ RasMol ]	+environment [ RasMol ]
		AC5	[ RasMol ]	+environment [ RasMol ]
		AC6	[ RasMol ]	+environment [ RasMol ]
		AC7	[ RasMol ]	+environment [ RasMol ]
		AC8	[ RasMol ]	+environment [ RasMol ]
		AC9	[ RasMol ]	+environment [ RasMol ]
		BC1	[ RasMol ]	+environment [ RasMol ]
		BC2	[ RasMol ]	+environment [ RasMol ]
		BC3	[ RasMol ]	+environment [ RasMol ]
		BC4	[ RasMol ]	+environment [ RasMol ]
		BC5	[ RasMol ]	+environment [ RasMol ]
		BC6	[ RasMol ]	+environment [ RasMol ]
		BC7	[ RasMol ]	+environment [ RasMol ]

	Cis Peptide Bonds
		Asn A:42 - Pro A:43	[ RasMol ]
		Asn B:42 - Pro B:43	[ RasMol ]
		Asn C:42 - Pro C:43	[ RasMol ]
		Asn D:42 - Pro D:43	[ RasMol ]
		Asn E:42 - Pro E:43	[ RasMol ]
		Asn F:42 - Pro F:43	[ RasMol ]
		Asn G:42 - Pro G:43	[ RasMol ]
		Asn H:42 - Pro H:43	[ RasMol ]

Biological Units
	Complete Structure
		Biological Unit 1	[ Jena3D ]
		Biological Unit 2	[ Jena3D ]
		Biological Unit 3	[ Jena3D ]
		Biological Unit 4	[ Jena3D ]

Jmol
	protein: cartoon or spacefill or dots and stick; nucleic acid: cartoon and stick; ligands: spacefill; active site: stick [ Asym. Unit PNG format \| Asym. Unit - sites PNG format \| Biol. Unit 1 PNG format \| Biol. Unit 1 - sites PNG format \| Biol. Unit 2 PNG format \| Biol. Unit 3 PNG format \| Biol. Unit 4 PNG format ](automatic orientation, automatically generated)
Molscript
	protein, nucleic acid: cartoon; ligands: spacefill; active site: ball and stick [ mono PDF format \| stereo PDF format ](default orientation, automatically generated)

Access by PDB/NDB ID
	1rz1
		Family and Domain Information	:	ProDom \| SYSTERS
		General Structural Information	:	GlycoscienceDB \| MMDB \| NDB \| OCA \| PDB \| PDBe \| PDBj \| PDBsum \| PDBWiki \| PQS \| PROTEOPEDIA
		Orientation in Membranes	:	OPM
		Protein Surface	:	SURFACE
		Secondary Structure	:	DSSP (structure derived) \| HSSP (homology derived)
		Structural Genomics	:	GeneCensus
		Structural Neighbours	:	CE \| VAST
		Structure Classification	:	CATH \| Dali \| SCOP
		Validation and Original Data	:	BMRB Data View \| BMRB Restraints Grid \| EDS \| PROCHECK \| RECOORD \| WHAT_CHECK

Access by UniProt ID/Accession number
	Q9LAG2_GEOTM \| Q9LAG2
		Comparative Protein Structure Models	:	ModBase
		Genomic Information	:	Ensembl
		Protein-protein Interaction	:	DIP
		Sequence, Family and Domain Information	:	InterPro \| Pfam \| SMART \| UniProtKB/TrEMBL

Access by Enzyme Classificator (EC Number)
	(no 'Enzyme Classificator' available)
		General Enzyme Information	:	BRENDA \| EC-PDB \| Enzyme \| IntEnz
		Pathway	:	KEGG \| MetaCyc

Access by Disease Identifier (MIM ID)
	(no 'MIM ID' available)
		Disease Information	:	OMIM

Access by GenAge ID
	(no 'GenAge ID' available)
		Age Related Information	:	GenAge

Access by PDB/NDB ID
		Domain Information	:	XDom
		Interatomic Contacts of Structural Units	:	CSU
		Ligand-protein Contacts	:	LPC
		Protein Cavities	:	castP
		Sequence and Secondary Structure	:	PDBCartoon
		Structure Alignment	:	STRAP(Java WebStart application, automatic local installation, requires Java; full application with system access!)
		Structure and Sequence Browser	:	STING

Access by UniProt ID/Accession number
	Q9LAG2_GEOTM \| Q9LAG2
		Protein Disorder Prediction	:	DisEMBL \| FoldIndex \| GLOBPLOT (for more information see DisProt)

UniProtKB/TrEMBL
	Q9LAG2_GEOTM \| Q9LAG2	:	1rz0

1rz0	THE SAME PROTEIN IN NATIVE STATE

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (3, 64)

Sites (16, 16)

SS Bonds (0, 0)

Cis Peptide Bonds (8, 8)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (0, 0)

Exons (0, 0)

Sequences/Alignments

Classification and Annotation

SCOP Domains (1, 8)

CATH Domains (1, 8)

Pfam Domains (0, 0)

Gene Ontology (4, 4)

Visualization

Interactive Views

Still Images

Databases and Analysis Tools

Databases

Analysis Tools

Related Entries

Entries Sharing at Least One Protein Chain (UniProt ID)

Related Entries Specified in the PDB File