Chain A from PDB Type:PROTEIN Length:342
aligned with NMT1_HUMAN | P30419 from UniProtKB/Swiss-Prot Length:496
Alignment length:342
164 174 184 194 204 214 224 234 244 254 264 274 284 294 304 314 324 334 344 354 364 374 384 394 404 414 424 434 444 454 464 474 484 494
NMT1_HUMAN 155 GFTWDALDLGDRGVLKELYTLLNENYVEDDDNMFRFDYSPEFLLWALRPPGWLPQWHCGVRVVSSRKLVGFISAIPANIHIYDTEKKMVEINFLCVHKKLRSKRVAPVLIREITRRVHLEGIFQAVYTAGVVLPKPVGTCRYWHRSLNPRKLIEVKFSHLSRNMTMQRTMKLYRLPETPKTAGLRPMETKDIPVVHQLLTRYLKQFHLTPVMSQEEVEHWFYPQENIIDTFVVENANGEVTDFLSFYTLPSTIMNHPTHKSLKAAYSFYNVHTQTPLLDLMSDALVLAKMKGFDVFNALDLMENKTFLEKLKFGIGDGNLQYYLYNWKCPSMGAEKVGLVLQ 496
SCOP domains d1rxta1 A:78-218 N-myristoyl transferase, NMT d1rxta2 A:219-455 N-myristoyl transferase, NMT SCOP domains
CATH domains 1rxtA01 A:78-200 [code=3.40.630.30, no name defined] 1rxtA02 A:201-455 [code=3.40.630.30, no name defined] CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author ..........hhhhhhhhhhhhhh..............hhhhhhhhhh....hhhhheeee......eeeee..ee............ee....ee........hhhhhhhhhhhhhh......eeeee..................hhhhhhhh...........hhhhhhh..........eee.hhhhhhhhhhhhhhhh........................eeeeee.........eeeee......................ee.......hhhhhhhhhhhhh...........hhhhhh............eeee.................. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE -----------------------------------------------------------------------------------------NMT_1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NMT_2 ------------------------ PROSITE
Transcript 1 (1) Exon 1.4 Exon 1.5 PDB: A:92-122 --------------------------------------Exon 1.7 PDB: A:161-218 UniProt: 238-295 ------------------------------------Exon 1.9 PDB: A:255-317 (gaps) UniProt: 332-388 Exon 1.10 PDB: A:318-390 (gaps) UniProt: 389-444 Exon 1.11 PDB: A:391-449 (gaps) 1.12 Transcript 1 (1)
Transcript 1 (2) --------------------------------------------Exon 1.6 PDB: A:122-161 --------------------------------------------------------Exon 1.8 PDB: A:218-254 --------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript 1 (2)
1rxt A 78 GFTWDALDLGDRGVLKELYTLLNENYVEDDDNMFRFDYSPEFLLWALRPPGWLPQWHCGVRVVSSRKLVGFISAIPANIHIYDTEKKMVEINFLCVHKKLRSKRVAPVLIREITRRVHLEGIFQAVYTAGVVLPKPVGTCRYWHRSLNPRKLIEVKFSHLSRNMTMQRTMKLYRLPETPKTAGLRPMETKDIPVVHQLLTRYLKQFHLTPVMSQEEVEHWFYPQENIIDTFVVENANGEVTDFLSFYTLPSTIMNHPTHKSLKAAYSFYNVHTQTPLLDLMSDALVLAKMKGFDVFNALDLMENKTFLEKLKFGIGDGNLQYYLYNWKCPSMGAEKVGIVLQ 455
87 97 107 117 127 137 147 157 167 177 187 197 207 217 227 237 247 257 267 277 287 297 ||313 323 333 343 353 || 380 390 400 410 420 430 || 453
303| 356| 433|
310 374 447
Chain B from PDB Type:PROTEIN Length:342
aligned with NMT1_HUMAN | P30419 from UniProtKB/Swiss-Prot Length:496
Alignment length:342
164 174 184 194 204 214 224 234 244 254 264 274 284 294 304 314 324 334 344 354 364 374 384 394 404 414 424 434 444 454 464 474 484 494
NMT1_HUMAN 155 GFTWDALDLGDRGVLKELYTLLNENYVEDDDNMFRFDYSPEFLLWALRPPGWLPQWHCGVRVVSSRKLVGFISAIPANIHIYDTEKKMVEINFLCVHKKLRSKRVAPVLIREITRRVHLEGIFQAVYTAGVVLPKPVGTCRYWHRSLNPRKLIEVKFSHLSRNMTMQRTMKLYRLPETPKTAGLRPMETKDIPVVHQLLTRYLKQFHLTPVMSQEEVEHWFYPQENIIDTFVVENANGEVTDFLSFYTLPSTIMNHPTHKSLKAAYSFYNVHTQTPLLDLMSDALVLAKMKGFDVFNALDLMENKTFLEKLKFGIGDGNLQYYLYNWKCPSMGAEKVGLVLQ 496
SCOP domains d1rxtb1 B:78-218 N-myristoyl transferase, NMT d1rxtb2 B:219-455 N-myristoyl transferase, NMT SCOP domains
CATH domains 1rxtB01 B:78-200 [code=3.40.630.30, no name defined] 1rxtB02 B:201-455 [code=3.40.630.30, no name defined] CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author ..........hhhhhhhhhhhhhh..............hhhhhhhhhh....hhhhheee........eeee..ee............ee..............hhhhhhhhhhhhhh......eeeee..................hhhhhhhh...........hhhhhhh..........eee.hhhhhhhhhhhhhhhh........................eeeeee.........eeeee......................ee.......hhhhhhhhhhhhh...........hhhhhh............eeee.................. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE -----------------------------------------------------------------------------------------NMT_1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NMT_2 ------------------------ PROSITE
Transcript 1 (1) Exon 1.4 Exon 1.5 PDB: B:92-122 --------------------------------------Exon 1.7 PDB: B:161-218 UniProt: 238-295 ------------------------------------Exon 1.9 PDB: B:255-317 (gaps) UniProt: 332-388 Exon 1.10 PDB: B:318-390 (gaps) UniProt: 389-444 Exon 1.11 PDB: B:391-449 (gaps) 1.12 Transcript 1 (1)
Transcript 1 (2) --------------------------------------------Exon 1.6 PDB: B:122-161 --------------------------------------------------------Exon 1.8 PDB: B:218-254 --------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript 1 (2)
1rxt B 78 GFTWDALDLGDRGVLKELYTLLNENYVEDDDNMFRFDYSPEFLLWALRPPGWLPQWHCGVRVVSSRKLVGFISAIPANIHIYDTEKKMVEINFLCVHKKLRSKRVAPVLIREITRRVHLEGIFQAVYTAGVVLPKPVGTCRYWHRSLNPRKLIEVKFSHLSRNMTMQRTMKLYRLPETPKTAGLRPMETKDIPVVHQLLTRYLKQFHLTPVMSQEEVEHWFYPQENIIDTFVVENANGEVTDFLSFYTLPSTIMNHPTHKSLKAAYSFYNVHTQTPLLDLMSDALVLAKMKGFDVFNALDLMENKTFLEKLKFGIGDGNLQYYLYNWKCPSMGAEKVGIVLQ 455
87 97 107 117 127 137 147 157 167 177 187 197 207 217 227 237 247 257 267 277 287 297 ||313 323 333 343 353 || 380 390 400 410 420 430 || 453
303| 356| 433|
310 374 447
Chain C from PDB Type:PROTEIN Length:325
aligned with NMT1_HUMAN | P30419 from UniProtKB/Swiss-Prot Length:496
Alignment length:335
171 181 191 201 211 221 231 241 251 261 271 281 291 301 311 321 331 341 351 361 371 381 391 401 411 421 431 441 451 461 471 481 491
NMT1_HUMAN 162 DLGDRGVLKELYTLLNENYVEDDDNMFRFDYSPEFLLWALRPPGWLPQWHCGVRVVSSRKLVGFISAIPANIHIYDTEKKMVEINFLCVHKKLRSKRVAPVLIREITRRVHLEGIFQAVYTAGVVLPKPVGTCRYWHRSLNPRKLIEVKFSHLSRNMTMQRTMKLYRLPETPKTAGLRPMETKDIPVVHQLLTRYLKQFHLTPVMSQEEVEHWFYPQENIIDTFVVENANGEVTDFLSFYTLPSTIMNHPTHKSLKAAYSFYNVHTQTPLLDLMSDALVLAKMKGFDVFNALDLMENKTFLEKLKFGIGDGNLQYYLYNWKCPSMGAEKVGLVLQ 496
SCOP domains d1rxtc1 C:85-218 N-myristoyl transferase, NMT d1rxtc2 C:219-455 N-myristoyl transferase, NMT SCOP domains
CATH domains 1rxtC01 C:85-214,C:419-428 [code=3.40.630.30, no name defined] 1rxtC02 C:215-418,C:429-455 [code=3.40.630.30, no name defined] 1rxtC01 1rxtC02 C:215- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...hhhhhhhhhhhhhh..............hhhhhhhhhh....hhhhhee..--------.ee..ee............ee..............hhhhhhhhhhhhhh......eeeee..................hhhhhhhh...........hhhhhhh..........eee.hhhhhhhhhhhhhhhh........................eeeeee.........eeeee........--............ee.......hhhhhhhhhhhhh...........hhhhhh............eeee........hhhhh..... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------NMT_1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NMT_2 ------------------------ PROSITE
Transcript 1 (1) 1.4 Exon 1.5 PDB: C:92-122 --------------------------------------Exon 1.7 PDB: C:161-218 UniProt: 238-295 ------------------------------------Exon 1.9 PDB: C:255-317 (gaps) UniProt: 332-388 Exon 1.10 PDB: C:318-390 (gaps) UniProt: 389-444 Exon 1.11 PDB: C:391-449 (gaps) 1.12 Transcript 1 (1)
Transcript 1 (2) -------------------------------------Exon 1.6 PDB: C:122-161 (gaps) --------------------------------------------------------Exon 1.8 PDB: C:218-254 --------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript 1 (2)
1rxt C 85 DLGDRGVLKELYTLLNENYVEDDDNMFRFDYSPEFLLWALRPPGWLPQWHCGVR--------GFISAIPANIHIYDTEKKMVEINFLCVHKKLRSKRVAPVLIREITRRVHLEGIFQAVYTAGVVLPKPVGTCRYWHRSLNPRKLIEVKFSHLSRNMTMQRTMKLYRLPETPKTAGLRPMETKDIPVVHQLLTRYLKQFHLTPVMSQEEVEHWFYPQENIIDTFVVENANGEVTDFLSFYTLPSTIMN--THKSLKAAYSFYNVHTQTPLLDLMSDALVLAKMKGFDVFNALDLMENKTFLEKLKFGIGDGNLQYYLYNWKCPSMGAEKVGIVLQ 455
94 104 114 124 134 | - | 154 164 174 184 194 204 214 224 234 244 254 264 274 284 294 310 320 330 | -| 350 ||377 387 397 407 417 427 ||450
138 147 303| 338 | 356| 433|
310 341 374 447
Chain D from PDB Type:PROTEIN Length:326
aligned with NMT1_HUMAN | P30419 from UniProtKB/Swiss-Prot Length:496
Alignment length:335
171 181 191 201 211 221 231 241 251 261 271 281 291 301 311 321 331 341 351 361 371 381 391 401 411 421 431 441 451 461 471 481 491
NMT1_HUMAN 162 DLGDRGVLKELYTLLNENYVEDDDNMFRFDYSPEFLLWALRPPGWLPQWHCGVRVVSSRKLVGFISAIPANIHIYDTEKKMVEINFLCVHKKLRSKRVAPVLIREITRRVHLEGIFQAVYTAGVVLPKPVGTCRYWHRSLNPRKLIEVKFSHLSRNMTMQRTMKLYRLPETPKTAGLRPMETKDIPVVHQLLTRYLKQFHLTPVMSQEEVEHWFYPQENIIDTFVVENANGEVTDFLSFYTLPSTIMNHPTHKSLKAAYSFYNVHTQTPLLDLMSDALVLAKMKGFDVFNALDLMENKTFLEKLKFGIGDGNLQYYLYNWKCPSMGAEKVGLVLQ 496
SCOP domains d1rxtd1 D:85-218 N-myristoyl transferase, NMT d1rxtd2 D:219-455 N-myristoyl transferase, NMT SCOP domains
CATH domains 1rxtD01 D:85-214,D:419-428 [code=3.40.630.30, no nam e defined] 1rxtD02 D:215-418,D:429-455 [code=3.40.630.30, no name defined] 1rxtD01 1rxtD02 D:215- CATH domains
Pfam domains (1) NMT-1rxtD01 D:85-217 -------------NMT_C-1rxtD05 D:231-454 - Pfam domains (1)
Pfam domains (2) NMT-1rxtD02 D:85-217 -------------NMT_C-1rxtD06 D:231-454 - Pfam domains (2)
Pfam domains (3) NMT-1rxtD03 D:85-217 -------------NMT_C-1rxtD07 D:231-454 - Pfam domains (3)
Pfam domains (4) NMT-1rxtD04 D:85-217 -------------NMT_C-1rxtD08 D:231-454 - Pfam domains (4)
Sec.struct. author ...hhhhhhhhhhhhhh..............hhhhhhhhhh....hhhhh...---------.....ee..ee........ee..............hhhhhhhhhhhhhh......eeeee..................hhhhhhhh...........hhhhhhh..........eee.hhhhhhhhhhhhhhhh.....ee...................eeee.........eee........................ee.......hhhhhhhhhhhhh...........hhhhhh............eeee........hhhhh..... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------NMT_1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NMT_2 ------------------------ PROSITE
Transcript 1 (1) 1.4 Exon 1.5 PDB: D:92-122 --------------------------------------Exon 1.7 PDB: D:161-218 UniProt: 238-295 ------------------------------------Exon 1.9 PDB: D:255-317 (gaps) UniProt: 332-388 Exon 1.10 PDB: D:318-390 (gaps) UniProt: 389-444 Exon 1.11 PDB: D:391-449 (gaps) 1.12 Transcript 1 (1)
Transcript 1 (2) -------------------------------------Exon 1.6 PDB: D:122-161 (gaps) --------------------------------------------------------Exon 1.8 PDB: D:218-254 --------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript 1 (2)
1rxt D 85 DLGDRGVLKELYTLLNENYVEDDDNMFRFDYSPEFLLWALRPPGWLPQWHCGV---------GFISAIPANIHIYDTEKKMVEINFLCVHKKLRSKRVAPVLIREITRRVHLEGIFQAVYTAGVVLPKPVGTCRYWHRSLNPRKLIEVKFSHLSRNMTMQRTMKLYRLPETPKTAGLRPMETKDIPVVHQLLTRYLKQFHLTPVMSQEEVEHWFYPQENIIDTFVVENANGEVTDFLSFYTLPSTIMNHPTHKSLKAAYSFYNVHTQTPLLDLMSDALVLAKMKGFDVFNALDLMENKTFLEKLKFGIGDGNLQYYLYNWKCPSMGAEKVGIVLQ 455
94 104 114 124 134 | - | 154 164 174 184 194 204 214 224 234 244 254 264 274 284 294 310 320 330 340 350 ||377 387 397 407 417 427 ||450
137 147 303| 356| 433|
310 374 447
Legend: |
|
→ Mismatch |
(orange background) |
|
- |
→ Gap |
(green background, '-', border residues have a numbering label) |
|
|
→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
|
x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
|
extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |