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(-) Description

Title :  SOLUTION STRUCTURE OF THE HYPOTHETICAL PROTEIN SAV1595 FROM STAPHYLOCOCCUS AUREUS, A PUTATIVE RNA BINDING PROTEIN
 
Authors :  D. Liu, D. F. Wyss
Date :  04 Dec 03  (Deposition) - 06 Jul 04  (Release) - 24 Feb 09  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (10x)
Keywords :  Structural Genomics, Sav1595, Yhby, Upf0044, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  D. Liu, D. F. Wyss
Solution Structure Of The Hypothetical Protein Sav1595 From Staphylococcus Aureus, A Putative Rna Binding Protein.
J. Biomol. Nmr V. 29 391 2004
PubMed-ID: 15213438  |  Reference-DOI: 10.1023/B:JNMR.0000032524.62229.93
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - CONSERVED HYPOTHETICAL PROTEIN
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI BL21(DE3)
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Organism Scientific: STAPHYLOCOCCUS AUREUS
    Organism Taxid: 1280
    Other Details: HOMOLOGOUS TO YHBY OF E.COLI.

 Structural Features

(-) Chains, Units

  
NMR Structure (10x): 

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 1RQ8)

(-) Sites  (0, 0)

(no "Site" information available for 1RQ8)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1RQ8)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 1RQ8)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1RQ8)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 1RQ8)

(-) Exons   (0, 0)

(no "Exon" information available for 1RQ8)

(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:96
 aligned with A0A0H3JRP0_S | A0A0H3JRP0 from UniProtKB/TrEMBL  Length:96

    Alignment length:96
                                    10        20        30        40        50        60        70        80        90      
          A0A0H3JRP0_S    1 MLTGKQKRYLRSLAHNIDPIFQIGKGGINENMIKQIDDTLENRELIKVHVLQNNFDDKKELAETLSEATRSELVQVIGSMIVIYRESKENKEIELP 96
               SCOP domains d1rq8a_ A: Hypothetical protein SAV1595                                                          SCOP domains
               CATH domains 1rq8A00 A:1-96 YhbY-like                                                                         CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..hhhhhhhhhhhh.......ee.....hhhhhhhhhhhhhhh.eeeeee...hhhhhhhhhhhhhhhhheeeeeee..eeeeee........... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------ Transcript
                  1rq8 A  1 MLTGKQKRYLRSLAHNIDPIFQIGKGGINENMIKQIDDTLENRELIKVHVLQNNFDDKKELAETLSEATRSELVQVIGSMIVIYRESKENKEIELP 96
                                    10        20        30        40        50        60        70        80        90
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 1)

NMR Structure
(-)
Class: Alpha and beta proteins (a+b) (23004)

(-) CATH Domains  (1, 1)

NMR Structure
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 1RQ8)

(-) Gene Ontology  (0, 0)

NMR Structure(hide GO term definitions)
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  1rq8
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 Related Entries

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