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(-) Description

Title :  SOLUTION STRUCTURE OF RP 71955, A NEW 21 AMINO ACID TRICYCLIC PEPTIDE ACTIVE AGAINST HIV-1 VIRUS
 
Authors :  D. Frechet, J. D. Guitton, F. Herman, D. Faucher, G. Helynck, B. Monegie Sorbier, J. P. Ridoux, E. James-Surcouf, M. Vuilhorgne
Date :  31 Aug 93  (Deposition) - 31 Jan 94  (Release) - 13 Jul 11  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (20x)
NMR Structure *:  A  (1x)
Keywords :  Hiv Replication Inhibitor, Replication Inhibitor (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  D. Frechet, J. D. Guitton, F. Herman, D. Faucher, G. Helynck, B. Monegier Du Sorbier, J. P. Ridoux, E. James-Surcouf, M. Vuilhorgne
Solution Structure Of Rp 71955, A New 21 Amino Acid Tricyclic Peptide Active Against Hiv-1 Virus.
Biochemistry V. 33 42 1994
PubMed-ID: 8286361  |  Reference-DOI: 10.1021/BI00167A006

(-) Compounds

Molecule 1 - TRICYCLIC PEPTIDE RP 71955
    Chains: A
    Engineered: YES
    Organism Scientific: ACTINOMYCETE SP9440
    Organism Taxid: 66694

 Structural Features

(-) Chains, Units

  1
NMR Structure (20x): A
NMR Structure * (1x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 1RPC)

(-) Sites  (0, 0)

(no "Site" information available for 1RPC)

(-) SS Bonds  (2, 2)

NMR Structure
No.Residues
1A:1 -A:13
2A:7 -A:19

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 1RPC)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1RPC)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 1RPC)

(-) Exons   (0, 0)

(no "Exon" information available for 1RPC)

(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:21
 aligned with 3CP1_STRS9 | P37046 from UniProtKB/Swiss-Prot  Length:21

    Alignment length:21
                                    10        20 
            3CP1_STRS9    1 CLGIGSCNNFAGCGYAVVCFW 21
               SCOP domains d1rpca_ A: RP71935    SCOP domains
               CATH domains --------------------- CATH domains
               Pfam domains --------------------- Pfam domains
         Sec.struct. author ..................... Sec.struct. author
                 SAPs(SNPs) --------------------- SAPs(SNPs)
                    PROSITE --------------------- PROSITE
                 Transcript --------------------- Transcript
                  1rpc A  1 CLGIGSCNDFAGCGYAVVCFW 21
                                    10        20
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 1)

NMR Structure
(-)
Class: Peptides (792)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 1RPC)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 1RPC)

(-) Gene Ontology  (0, 0)

NMR Structure(hide GO term definitions)
    (no "Gene Ontology" information available for 1RPC)

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  Ligands, Modified Residues, Ions
(no "Ligands, Modified Residues, Ions" information available for 1rpc)
 
  Sites
(no "Sites" information available for 1rpc)
 
  Cis Peptide Bonds
(no "Cis Peptide Bonds" information available for 1rpc)
 

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 Databases and Analysis Tools

(-) Databases

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  1rpc
    Family and Domain Information: ProDom | SYSTERS
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    Secondary Structure: DSSP (structure derived) | HSSP (homology derived)
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    Structure Classification: CATH | Dali | SCOP
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  3CP1_STRS9 | P37046
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(-) Analysis Tools

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        3CP1_STRS9 | P37046: 1rpb

(-) Related Entries Specified in the PDB File

1rpb