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(-) Description

Title :  STRUCTURE OF A CONSERVED PROTEIN FROM THERMOPLASMA ACIDOPHILUM
 
Authors :  M. E. Cuff, X. Xu, A. Savchenko, A. Edwards, A. Joachimiak, Midwest Cen Structural Genomics (Mcsg)
Date :  25 Nov 03  (Deposition) - 04 May 04  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.80
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (1x)
Biol. Unit 2:  A  (3x)
Keywords :  Structural Genomics, T. Acidophilum, Psi, Protein Structure Initiative, Midwest Center For Structural Genomics, Mcsg, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  M. E. Cuff, X. Xu, A. Savchenko, A. Edwards, A. Joachimiak
Structure Of A Conserved Protein From T. Acidophilum
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - CONSERVED HYPOTHETICAL PROTEIN
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Gene: CAC12474
    Organism Scientific: THERMOPLASMA ACIDOPHILUM
    Organism Taxid: 2303

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit : A
Biological Unit 1 (1x): A
Biological Unit 2 (3x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

Asymmetric Unit (1, 1)
No.NameCountTypeFull Name
1NA1Ligand/IonSODIUM ION
Biological Unit 1 (0, 0)
No.NameCountTypeFull Name
1NA-1Ligand/IonSODIUM ION
Biological Unit 2 (0, 0)
No.NameCountTypeFull Name
1NA-1Ligand/IonSODIUM ION

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWARELEU A:122 , HOH A:539BINDING SITE FOR RESIDUE NA A 522

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1RLH)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 1RLH)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1RLH)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 1RLH)

(-) Exons   (0, 0)

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(-) Sequences/Alignments

Asymmetric Unit
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SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:PROTEIN  Length:151
 aligned with Q9HII6_THEAC | Q9HII6 from UniProtKB/TrEMBL  Length:153

    Alignment length:151
                                            1                                                                                                                                      
                                     -      |  4        14        24        34        44        54        64        74        84        94       104       114       124       134 
         Q9HII6_THEAC     - ----------------MVIPAEANIIVGYSHFIKTVEDLNEIIRTHVPGSKYGIGFSEASGDRLIRYDGNDDDLVKACIENIRRISAGHTFVILIRNAYPINILNAVKMCQEVGSIFAATANPLQIIVYKGERGNGVLGVIDGYSPVGVES 135
               SCOP domains d1rlha_ A: Hypothetical protein Ta1353                                                                                                                  SCOP domains
               CATH domains 1rlhA01 Ta1353-like  1rlhA02 A:6-106 hypothetical protein tt1634                                                          1rlhA01 A:-15-5,A:107-135     CATH domains
               Pfam domains ----------------Adenosine_kin-1rlhA01 A:1-135                                                                                                           Pfam domains
         Sec.struct. author .......................eeeeeee.....hhhhhhhhhhhh...eeeeeee.......eeeee.hhhhhhhhhhhhhhhh...eeeeeee..hhhhhhhhhhhhhh.eeeeeee...eeeeeee....eeeeeeee......... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1rlh A -15 HHHHHHSSGLVPRGSHMVIPAEANIIVGYSHFIKTVEDLNEIIRTHVPGSKYGIGFSEASGDRLIRYDGNDDDLVKACIENIRRISAGHTFVILIRNAYPINILNAVKMCQEVGSIFAATANPLQIIVYKGERGNGVLGVIDGYSPVGVES 135
                                    -6         4        14        24        34        44        54        64        74        84        94       104       114       124       134
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 Classification and Annotation

(-) SCOP Domains  (1, 1)

Asymmetric Unit
(-)
Class: Alpha and beta proteins (a+b) (23004)

(-) CATH Domains  (2, 2)

Asymmetric Unit
(-)
Class: Alpha Beta (26913)
(-)
Class: Mainly Beta (13760)

(-) Pfam Domains  (1, 1)

Asymmetric Unit
(-)
Clan: no clan defined [family: Adenosine_kin] (3)

(-) Gene Ontology  (0, 0)

Asymmetric Unit(hide GO term definitions)
    (no "Gene Ontology" information available for 1RLH)

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  1rlh
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