1QXP - JenaLib

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:783
 aligned with CAN1_RAT | P97571 from UniProtKB/Swiss-Prot  Length:713

    Alignment length:846
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      712        713                                                                                                                                      
                                    21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541       551       561       571       581       591       601       611       621       631       641       651       661       671       681       691       701       711|        - |       -         -         -         -         -         -         -         -         -         -         -         -         -      
             CAN1_RAT    12 TGVSAQVQKQRDKELGLGRHENAIKYLGQDYENLRARCLQNGVLFQDDAFPPVSHSLGFKELGPNSSKTYGIKWKRPTELLSNPQFIVDGATRTDICQGALGDCWLLAAIASLTLNETILHRVVPYGQSFQEGYAGIFHFQLWQFGEWVDVVVDDLLPTKDGKLVFVHSAQGNEFWSALLEKAYAKVNGSYEALSGGCTSEAFEDFTGGVTEWYDLQKAPSDLYQIILKALERGSLLGCSINISDIRDLEAITFKNLVRGHAYSVTDAKQVTYQGQRVNLIRMRNPWGEVEWKGPWSDNSYEWNKVDPYEREQLRVKMEDGEFWMSFRDFIREFTKLEICNLTPDALKSRTLRNWNTTFYEGTWRRGSTAGGCRNYPATFWVNPQFKIRLEEVDDADDYDSRESGCSFLLALMQKHRRRERRFGRDMETIGFAVYQVPRELAGQPVHLKRDFFLANASRAQSEHFINLREVSNRIRLPPGEYIVVPSTFEPNKEGDFLLRFFSEKKAGTQELDDQIQANLPDEKVLSEEEIDDNFKTLFSKLAGDDMEISVKELQTILNRIISKHKDLRTNGFSLESCRSMVNLMDRDGNGKLGLVEFNILWNRIRNYLTIFRKFDLDKSGSMSAYEMRMAIEAAGFKLNKKLHELIITRYSEPDLAVDFDNFVCCLVRLETMFRFFKILDTDLDGVVTFDLFKWLQLTMF----------A--------------------------------------------------------------------------------------------------------------------------------------   -
               SCOP domains d1qxpa4 A:2-355 Calpain large subunit, catalytic domain (domain II)                                                                                                                                                                                                                                                                                               d1qxpa3 A:356-514 Calpain large subunit,      middle domain (          domain III)                                                                             d1qxpa2                   A:515-702 Calpain la         rge subunit, C-term  inal domain (domain IV)                                                                                         d1qxpa1 A:710-893 Calpain small (regulatory) subunit (domain VI)                                                                                  SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------         -----   ------------------------------------- ----------------------------------------------  -------1qxpA03 A:355-514  [code=2.60.120.380, no      name defined]                                                                                                    1qxpA04                   A:515-686 EF-hand                                                                                                                                 1qxpA05 A:687-893 EF-hand                                                                                                                                         CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..hhhhhhhhhhhh..........hhhhhhhhhhhhhhhh.............hhhhh.......hhhhh.....hhhhh.........................hhhhhhhhhhhhhhhhh..............eeeeeeee..eeeeeeee....ee..ee..........hhhhhhhhhhhhhhh.hhhhh..hhhhhhhhh......eee.hhh..hhhhhhhhhhh...eeeee...---------.....---...eeeeeee........eeeeee.............-..........hhhhhh....................eeeee.....--............eeeeee..............hhhhh...eeee.....-----......eeeeeeee.----------....eeeeeee.....----...hhhhhh................eeeeee...eeeeeeeee......eeeeeeeee...eee.......ee...------------------....................---------.....hhhhhhhhhhhhh.--.......hhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhh.ee.hhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhh.......eeeehhhhhhhh...................hhhhhh............hhhhhhhhhhhhh........hhhhhhhhhhhhhhh...........hhhhh..............hhhhhhhhhhhhhhhhhhhhhhh.....eeeehhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                PROSITE (2) -------------------------------------------CALPAIN_CAT  PDB: A:45-344 UniProt: 55-354                                                                                                                                                                                                                                                                  ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EF_HAND_1    -----------------EF_HAND_1    -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (3)
                PROSITE (4) -------------------------------------------------------------------------------------------------THIOL_PROTEA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (4)
                PROSITE (1) -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EF_HAND_2          --------EF_HAND_2  PDB: A:574-599 ----EF_HAND_2  PDB: A:604-639           -----------------------------EF_HAND_2  PDB: A:669-734 UniProt: 679-713   -------------------------------------------------------------------------------------------------------------------------------------- PROSITE (1)
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 1qxp A   2 AGIAMKLAKDREAAEGLGSHERAIKYLNQDYETLRNECLEAGALFQDPAFPPVSHSLGFKELGPNSSKTYGIKWKRPTELLSNPQFIVDGATRTDICQGALGDSWLLAAIASLTLNETILHRVVPYGQSFQEGYAGIFHFQLWQFGEWVDVVVDDLLPTKDGKLVFVHSAQGNEFWSALLEKAYAKVNGSYEALSGGCTSEAFEDFTGGVTEWYDLQKAPSDLYQIILKALERGSLLGCSINI---------TFKNL---HAYSVTDAKQVTYQGQRVNLIRMRNPWGEVEWKGPWS-NSYEWNKVDPYEREQLRVKMEDGEFWMSFRDFIREFTKLEICNLTP--LKSRTLRNWNTTFYEGTWRRGSTAGGCRNYPATFWVNPQFKIRLEEVDD-----SRESGCSFLLALMQK----------DMETIGFAVYQVPREL----VHLKRDFFLANASRAQSEHFINLREVSNRIRLPPGEYIVVPSTFEPNKEGDFLLRFFSEKKAGTQELDDQIQANLP------------------SKLAGDDMEISVKELQTILN---------RTNGFSLESCRSMVNLMDR--NGKLGLVEFNILWNRIRNYLTIFRKFDLDKSGSMSAYEMRMAIEAAGFKLPCQLHQVIVARFADDELIIDFDNFVRCLVRLEILFKIFKQLDPENTGTIQLDLISWLSFSVLMHYSNIFVQLAGDDMEVSATELMNILNKHPDLKGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNNIKKWQGIYTDRSGPGAFEAAGFHLNQHIYSETGNMDFDNFISCLVRLDAMFRAFRSLDKNGTGQIQVNIQEWLQLTMYS 893
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241  |      -  |   |  -|      271       281       291      |301       311       321       331       341   |  |351       361       371       381       391    |    -|      411    |    -     | 431       441|    | 451       461       471       481       491       501       511       521|        -       541       551        |-       571       581      |591       601       611       621       631       641       651       661       671       681       691       701||    |732       742       756   ||  768       778       788       798    || 812|      829      |847       857       867       877       887      
                                                                                                                                                                                                                                                                            244       254 258 262                                 298 |                                          345  |                                             396   402           416        427            442  447                                                                        522                541                560       570               588  |                                                                                                            702|  715|                  751| 760|                                     803| 812|             836|                                                
                                                                                                                                                                                                                                                                                                                                    300                                             348                                                                                                                                                                                                                                                591                                                                                                             710   730                   756  763                                      808  820              845

Chain A from PDB  Type:PROTEIN  Length:783
 aligned with CAN2_RAT | Q07009 from UniProtKB/Swiss-Prot  Length:700

    Alignment length:844
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    700                                                                                                                                                 
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541       551       561       571       581       591       601       611       621       631       641       651       661       671       681       691        |-         -         -         -         -         -         -         -         -         -         -         -         -         -         -    
             CAN2_RAT     2 AGIAMKLAKDREAAEGLGSHERAIKYLNQDYETLRNECLEAGALFQDPSFPALPSSLGFKELGPYSSKTRGIEWKRPTEICADPQFIIGGATRTDICQGALGDCWLLAAIASLTLNEEILARVVPLDQSFQENYAGIFHFQFWQYGEWVEVVVDDRLPTKDGELLFVHSAEGSEFWSALLEKAYAKINGCYEALSGGATTEGFEDFTGGIAEWYELRKPPPNLFKIIQKALEKGSLLGCSIDITSAADSEAVTYQKLVKGHAYSVTGAEEVESSGSLQKLIRIRNPWGQVEWTGKWNDNCPSWNTVDPEVRANLTERQEDGEFWMSFSDFLRHYSRLEICNLTPDTLTCDSYKKWKLTKMDGNWRRGSTAGGCRNYPNTFWMNPQYLIKLEEEDEDDEDGERGCTFLVGLIQKHRRRQRKMGEDMHTIGFGIYEVPEELTGQTNIHLSKNFFLTTRARERSDTFINLREVLNRFKLPPGEYVLVPSTFEPHKNGDFCIRVFSEKKADYQTVDDEIEANIEEIEANEEDIGDGFRRLFAQLAGEDAEISAFELQTILRRVLAKREDIKSDGFSIETCKIMVDMLDEDGSGKLGLKEFYILWTKIQKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKLPCQLHQVIVARFADDELIIDFDNFVRCLVRLEILFKIFKQLDPENTGTIQLDLISWLSFSVL-------------------------------------------------------------------------------------------------------------------------------------------------   -
               SCOP domains d1qxpa4 A:2-355 Calpain large subunit, catalytic domain (domain II)                                                                                                                                                                                                                                                                                               d1qxpa3 A:356-514 Calpain large subunit,    middle domain (          domain III)                                                                              d1qxpa2                  A:515-702 Calpain la         rge subunit, C-term  inal domain (domain IV)                                                                                         d1qxpa1 A:710-893 Calpain small (regulatory) subunit (domain VI)                                                                                  SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------         -----   ------------------------------------- ----------------------------------------------  -------1qxpA03 A:355-514  [code=2.60.120.380, no    name defined]                                                                                                     1qxpA04                  A:515-686 EF-hand                                                                                                                                 1qxpA05 A:687-893 EF-hand                                                                                                                                         CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhh..........hhhhhhhhhhhhhhhh.............hhhhh.......hhhhh.....hhhhh.........................hhhhhhhhhhhhhhhhh..............eeeeeeee..eeeeeeee....ee..ee..........hhhhhhhhhhhhhhh.hhhhh..hhhhhhhhh......eee.hhh..hhhhhhhhhhh...eeeee...---------.....---...eeeeeee........eeeeee.............-..........hhhhhh....................eeeee.....--............eeeeee..............hhhhh...eeee.....---......eeeeeeee.----------....eeeeeee.....-----...hhhhhh................eeeeee...eeeeeeeee......eeeeeeeee...eee.......ee...-----------------....................---------.....hhhhhhhhhhhhh.--.......hhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhh.ee.hhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhh.......eeeehhhhhhhh...................hhhhhh............hhhhhhhhhhhhh........hhhhhhhhhhhhhhh...........hhhhh..............hhhhhhhhhhhhhhhhhhhhhhh.....eeeehhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) -------------------------------------------CALPAIN_CAT  PDB: A:45-344 UniProt: 45-344                                                                                                                                                                                                                                                                  --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (1)
                PROSITE (2) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EF_HAND_1    -----------------EF_HAND_1    ---------------------------------------EF_HAND_2  PDB: A:669-702         ------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) -------------------------------------------------------------------------------------------------THIOL_PROTEA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (3)
                PROSITE (4) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EF_HAND_2  PDB: A:574-599 ----EF_HAND_2  PDB: A:606-639           ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (4)
           Transcript 1 (1) Exon 1.1  PDB: A:2-79 UniProt: 1-79 [INCOMPLETE]                              Exon 1.2  PDB: A:80-103 ---------------------------------------Exon 1.4  PDB: A:143-187 UniProt: 143-187    --------------------------------------------------------Exon 1.6 UniProt: 244-271   Exon 1.7 UniProt: 272-300    ------------------------------------------------------------------------------Exon 1.10  PDB: A:379-437 (gaps) UniProt: 379-435        1.11Exon 1.12  PDB: A:442-511 (gaps) UniProt: 440-510                      ------------Exon 1.14 [INCOMPLETE]Exon 1.15           ---------------------Exon 1.17              Exon 1.18  PDB: A:611-637  --------------------------------------Exon 1.20           1.21   ------------------------------------------------------------------------------------------------------------------------------------------------- Transcript 1 (1)
           Transcript 1 (2) -----------------------------------------------------------------------------------------------------Exon 1.3  PDB: A:103-142                --------------------------------------------Exon 1.5  PDB: A:187-243 UniProt: 187-243                --------------------------------------------------------Exon 1.8  PDB: A:300-325  ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.13    -----------------------------------------Exon 1.16 [INCOMPLETE]-------------------------------------------------Exon 1.19  PDB: A:637-676               --------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript 1 (2)
           Transcript 1 (3) -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.9  PDB: A:325-379 (gaps) UniProt: 325-379       ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript 1 (3)
                 1qxp A   2 AGIAMKLAKDREAAEGLGSHERAIKYLNQDYETLRNECLEAGALFQDPAFPPVSHSLGFKELGPNSSKTYGIKWKRPTELLSNPQFIVDGATRTDICQGALGDSWLLAAIASLTLNETILHRVVPYGQSFQEGYAGIFHFQLWQFGEWVDVVVDDLLPTKDGKLVFVHSAQGNEFWSALLEKAYAKVNGSYEALSGGCTSEAFEDFTGGVTEWYDLQKAPSDLYQIILKALERGSLLGCSINI---------TFKNL---HAYSVTDAKQVTYQGQRVNLIRMRNPWGEVEWKGPWS-NSYEWNKVDPYEREQLRVKMEDGEFWMSFRDFIREFTKLEICNLTP--LKSRTLRNWNTTFYEGTWRRGSTAGGCRNYPATFWVNPQFKIRLEEVDD---SRESGCSFLLALMQK----------DMETIGFAVYQVPREL-----VHLKRDFFLANASRAQSEHFINLREVSNRIRLPPGEYIVVPSTFEPNKEGDFLLRFFSEKKAGTQELDDQIQANLP-----------------SKLAGDDMEISVKELQTILN---------RTNGFSLESCRSMVNLMDR--NGKLGLVEFNILWNRIRNYLTIFRKFDLDKSGSMSAYEMRMAIEAAGFKLPCQLHQVIVARFADDELIIDFDNFVRCLVRLEILFKIFKQLDPENTGTIQLDLISWLSFSVLMHYSNIFVQLAGDDMEVSATELMNILNKHPDLKGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNNIKKWQGIYTDRSGPGAFEAAGFHLNQHIYSETGNMDFDNFISCLVRLDAMFRAFRSLDKNGTGQIQVNIQEWLQLTMYS 893
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241  |      -  |   |  -|      271       281       291      |301       311       321       331       341   |  |351       361       371       381       391    |  403       413  |      -   |   433        |-    |  452       462       472       482       492       502       512       522         -       543       553      |  -      |573       583    |  593       603       613       623       633       643       653       663       673       683       693       710    || 734       744      |758 ||    770       780       790       800  ||   821       831    || 849       859       869       879       889    
                                                                                                                                                                                                                                                                            244       254 258 262                                 298 |                                          345  |                                             396 402           416        427            442   447                                                                        522               541                560       570               588  |                                                                                                            702|  715|                  751| 760|                                     803| 812|             836|                                                
                                                                                                                                                                                                                                                                                                                                    300                                             348                                                                                                                                                                                                                                              591                                                                                                             710   730                   756  763                                      808  820              845

Chain B from PDB  Type:PROTEIN  Length:788
 aligned with CAN1_RAT | P97571 from UniProtKB/Swiss-Prot  Length:713

    Alignment length:850
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       713                                                                                                                                                    
                                    21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541       551       561       571       581       591       601       611       621       631       641       651       661       671       681       691       701       711 |       -         -         -         -         -         -         -         -         -         -         -         -         -         -         -
             CAN1_RAT    12 TGVSAQVQKQRDKELGLGRHENAIKYLGQDYENLRARCLQNGVLFQDDAFPPVSHSLGFKELGPNSSKTYGIKWKRPTELLSNPQFIVDGATRTDICQGALGDCWLLAAIASLTLNETILHRVVPYGQSFQEGYAGIFHFQLWQFGEWVDVVVDDLLPTKDGKLVFVHSAQGNEFWSALLEKAYAKVNGSYEALSGGCTSEAFEDFTGGVTEWYDLQKAPSDLYQIILKALERGSLLGCSINISDIRDLEAITFKNLVRGHAYSVTDAKQVTYQGQRVNLIRMRNPWGEVEWKGPWSDNSYEWNKVDPYEREQLRVKMEDGEFWMSFRDFIREFTKLEICNLTPDALKSRTLRNWNTTFYEGTWRRGSTAGGCRNYPATFWVNPQFKIRLEEVDDADDYDSRESGCSFLLALMQKHRRRERRFGRDMETIGFAVYQVPRELAGQPVHLKRDFFLANASRAQSEHFINLREVSNRIRLPPGEYIVVPSTFEPNKEGDFLLRFFSEKKAGTQELDDQIQANLPDEKVLSEEEIDDNFKTLFSKLAGDDMEISVKELQTILNRIISKHKDLRTNGFSLESCRSMVNLMDRDGNGKLGLVEFNILWNRIRNYLTIFRKFDLDKSGSMSAYEMRMAIEAAGFKLNKKLHELIITRYSEPDLAVDFDNFVCCLVRLETMFRFFKILDTDLDGVVTFDLFKWLQLTMFA----------------------------------------------------------------------------------------------------------------------------------------------------   -
               SCOP domains d1qxpb4 B:2-355 Calpain large subunit, catalytic domain (domain II)                                                                                                                                                                                                                                                                                               d1qxpb3 B:356-514 Calpain large subunit, middle domain (domain      III)                                                                                       d1qxpb2 B:51          5-70         2 Calpain l         arge subunit, C-te      rminal domain (domain IV)                                                                                     d1qxpb1 B:710-893 Calpain small (regulatory) subunit (domain VI)                                                                                     SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------            ---- --------------------------------------    ---  --------------------------------------------  -1qxpB03 B:355-514  [code=2.60.120.380, no name defined]                                                                                                         1qxpB04 B:51          5-68         6 EF-hand                                                                                                                                1qxpB05 B:687-89 3 EF-hand                                                                                                                                            CATH domains
           Pfam domains (1) -------------------------------------------PeptiPeptidase_C2-1qxpB03 B:50-344                                                                                                                                                                                                                                                                          -------  -Calpain_III-1qxpB07 B:355-511                                                                                                                                ---------------          ----         EF_hand_6-1         qxpB01 B:550-606                     ------------------------------------------------------------------------------------------------ ---------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains (1)
           Pfam domains (2) -------------------------------------------PeptiPeptidase_C2-1qxpB04 B:50-344                                                                                                                                                                                                                                                                          -------  -Calpain_III-1qxpB08 B:355-511                                                                                                                                ---------------          ----         EF_hand_6-1         qxpB02 B:550-606                     ------------------------------------------------------------------------------------------------ ---------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains (2)
         Sec.struct. author .hhhhhhhhhhhhhh........ee.hhhhhhhhhhhhhhhh..............................eeehhhhh...............ee......hhhhhhhhhhhhhhhhhh...............eeeeeeee..eeeeeeee..eeee..ee...ee.....hhhhhhhhhhhhhh..........hhhhhhhhhh.eeeeee.hhhhhhhhhhhhhhhhh..eeeee..------------....-...eeeeeeeeeee..eeeeeeeee.............----...--hhhhhh.........eeeee........eeeeee..........--...eeeeeeee...............hhhhh.eeeeee...............eeeeeeeeee..-----.......eeeeeee.......-....hhhhhhh....ee........eeeeeeee..eeeeeeeee.......eeeeeeee.....eeee....ee.......----------....---------.hhhhhhhhhh---------.....hhhhhhhhhhhh.------...hhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhh...ee.hhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhh......eeeehhhhhhhhh.-...............................hhhhhhhhhhhh........hhhhhhhhhhhhhhhhh..........hhhhh..........................hhhhhhhhhhhhhhhhh......eeeehhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) -------------------------------------------CALPAIN_CAT  PDB: B:45-344 UniProt: 55-354                                                                                                                                                                                                                                                                  --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EF_HAND_1    -----------------EF_HAND_1    ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE (3)
                PROSITE (4) -------------------------------------------------------------------------------------------------THIOL_PROTEA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (4)
                PROSITE (1) -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EF_HAND_2          --------EF_HAND_2  PDB: B:574-599 ----EF_HAND_2  PDB: B:604-639           -----------------------------EF_HAND_2  PDB: B:669-697          ---------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (1)
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1qxp B   2 AGIAMKLAKDREAAEGLGSHERAIKYLNQDYETLRNECLEAGALFQDPAFPPVSHSLGFKELGPNSSKTYGIKWKRPTELLSNPQFIVDGATRTDICQGALGDSWLLAAIASLTLNETILHRVVPYGQSFQEGYAGIFHFQLWQFGEWVDVVVDDLLPTKDGKLVFVHSAQGNEFWSALLEKAYAKVNGSYEALSGGCTSEAFEDFTGGVTEWYDLQKAPSDLYQIILKALERGSLLGCSIN------------KNLV-GHAYSVTDAKQVTYQGQRVNLIRMRNPWGEVEWKGPWS----EWN--DPYEREQLRVKMEDGEFWMSFRDFIREFTKLEICNLTPDALKSR--RNWNTTFYEGTWRRGSTAGGCRNYPATFWVNPQFKIRLEEVDDADDYDSRESGCSFLLALMQKHR-----FGRDMETIGFAVYQVPRELAG-PVHLKRDFFLANASRAQSEHFINLREVSNRIRLPPGEYIVVPSTFEPNKEGDFLLRFFSEKKAGTQELDDQIQANLPDEKV----------KTLF---------ISVKELQTILN---------RTNGFSLESCRSMVNLMD------LGLVEFNILWNRIRNYLTIFRKFDLDKSGSMSAYEMRMAIEAAGFKLPCQLHQVIVARFADDELIIDFDNFVRCLVRLEILFKIFKQLDPENTGTIQLDLISWLSFSVL-MHYSNNESEERQFRKLFVQLMEVSATELMFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNNIKKWQGIRFETDRSGPGAFEAAGFHLNQHIYSMIIRSDETGNMDFDNFISCLVRLDAMFRAFRSLDKNGTGQIQVNIQEWLQLTMYS 893
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241 |       -    |  261       271       281       291      |  - | |  |311       321       331       341       351  |    361       371       381       391       401       411      |  -  |    431       441  | |  451       461       471       481       491       501       511       521    |    -     |  |-       551        |-       571       581     |   -  |    601       611       621       631       641       651       661       671       681       691       701| |   |720||     731 ||    745||     772       782       792       802|      821       831       843       853       863       873       883       893
                                                                                                                                                                                                                                                                           243          256  | |                                  298  303 |  |                                        351  |                                                             418   424                 444 |                                                                             526        537  |       550       560       570              587    594                                                                                                         702 | 714| |||       733|     746|                                   802|    812|                 840|                                                  
                                                                                                                                                                                                                                                                                           259 |                                         305  |                                           354                                                                                         446                                                                                           540                                                                                                                                                                 710  718 |||        738      764                                    805     820                  843                                                  
                                                                                                                                                                                                                                                                                             261                                            308                                                                                                                                                                                                                                                                                                                                                                                                                720||                                                                                                                                          
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  0|                                                                                                                                          
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 723

Chain B from PDB  Type:PROTEIN  Length:788
 aligned with CAN2_RAT | Q07009 from UniProtKB/Swiss-Prot  Length:700

    Alignment length:849
                                                                                                                                                                                                                                                                                                                                                                                                                                              404                                                                                                                                                                                                                                                                                                                                                                                                                                                            
                                                                                                                                                                                                                                                                                                                                                                                                                                           403  |                                                                                                                                                                                                                                                                                                     700                                                                                                                                                    
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401 |  |  409       419       429       439       449       459       469       479       489       499       509       519       529       539       549       559       569       579       589       599       609       619       629       639       649       659       669       679       689       699|        -         -         -         -         -         -         -         -         -         -         -         -         -         -         
             CAN2_RAT     2 AGIAMKLAKDREAAEGLGSHERAIKYLNQDYETLRNECLEAGALFQDPSFPALPSSLGFKELGPYSSKTRGIEWKRPTEICADPQFIIGGATRTDICQGALGDCWLLAAIASLTLNEEILARVVPLDQSFQENYAGIFHFQFWQYGEWVEVVVDDRLPTKDGELLFVHSAEGSEFWSALLEKAYAKINGCYEALSGGATTEGFEDFTGGIAEWYELRKPPPNLFKIIQKALEKGSLLGCSIDITSAADSEAVTYQKLVKGHAYSVTGAEEVESSGSLQKLIRIRNPWGQVEWTGKWNDNCPSWNTVDPEVRANLTERQEDGEFWMSFSDFLRHYSRLEICNLTPDTLTCDSYKKWKLTKMDGNWRRGSTAGGCRNYPNTFWMNPQYLIKLEEEDEDDEDGER--GCTFLVGLIQKHRRRQRKMGEDMHTIGFGIYEVPEELTGQTNIHLSKNFFLTTRARERSDTFINLREVLNRFKLPPGEYVLVPSTFEPHKNGDFCIRVFSEKKADYQTVDDEIEANIEEIEANEEDIGDGFRRLFAQLAGEDAEISAFELQTILRRVLAKREDIKSDGFSIETCKIMVDMLDEDGSGKLGLKEFYILWTKIQKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKLPCQLHQVIVARFADDELIIDFDNFVRCLVRLEILFKIFKQLDPENTGTIQLDLISWLSFSVL----------------------------------------------------------------------------------------------------------------------------------------------------   -
               SCOP domains d1qxpb4 B:2-355 Calpain large subunit, catalytic domain (domain II)                                                                                                                                                                                                                                                                                               d1qxpb3 B:356-514 Calpain large subunit, middle domain (domain      III)                                                                                        d1qxpb2 B:51         5-70         2 Calpain l         arge subunit, C-te      rminal domain (domain IV)                                                                                    d1qxpb1 B:710-893 Calpain small (regulatory) subunit (domain VI)                                                                                     SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------            ---- --------------------------------------    ---  --------------------------------------------  -1qxpB03 B:355-514  [code=2.60.120.380, no name defined]                                                                                                          1qxpB04 B:51         5-68         6 EF-hand                                                                                                                                1qxpB05 B:687-893 EF-hand                                                                                                                                            CATH domains
           Pfam domains (1) -------------------------------------------PeptiPeptidase_C2-1qxpB03 B:50-344                                                                                                                                                                                                                                                                          -------  -Calpain_III-1qxpB07 B:355-511                                                                                                                                 ---------------         ----         EF_hand_6-1         qxpB01 B:550-606                     ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains (1)
           Pfam domains (2) -------------------------------------------PeptiPeptidase_C2-1qxpB04 B:50-344                                                                                                                                                                                                                                                                          -------  -Calpain_III-1qxpB08 B:355-511                                                                                                                                 ---------------         ----         EF_hand_6-1         qxpB02 B:550-606                     ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains (2)
         Sec.struct. author .hhhhhhhhhhhhhh........ee.hhhhhhhhhhhhhhhh..............................eeehhhhh...............ee......hhhhhhhhhhhhhhhhhh...............eeeeeeee..eeeeeeee..eeee..ee...ee.....hhhhhhhhhhhhhh..........hhhhhhhhhh.eeeeee.hhhhhhhhhhhhhhhhh..eeeee..------------....-...eeeeeeeeeee..eeeeeeeee.............----...--hhhhhh.........eeeee........eeeeee..........--...eeeeeeee...............hhhhh.eeeeee...............eeeeeeeeee..-----.......eeeeeee.......--....hhhhhhh....ee........eeeeeeee..eeeeeeeee.......eeeeeeee.....eeee....ee.......---------....---------.hhhhhhhhhh---------.....hhhhhhhhhhhh.------...hhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhh...ee.hhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhh......eeeehhhhhhhhh................................hhhhhhhhhhhh........hhhhhhhhhhhhhhhhh..........hhhhh..........................hhhhhhhhhhhhhhhhh......eeeehhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) -------------------------------------------CALPAIN_CAT  PDB: B:45-344 UniProt: 45-344                                                                                                                                                                                                                                                                  -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (1)
                PROSITE (2) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EF_HAND_1    -----------------EF_HAND_1    ---------------------------------------EF_HAND_2  PDB: B:669-702         ---------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) -------------------------------------------------------------------------------------------------THIOL_PROTEA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (3)
                PROSITE (4) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EF_HAND_2  PDB: B:574-599 ----EF_HAND_2  PDB: B:606-639           ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (4)
           Transcript 1 (1) Exon 1.1  PDB: B:2-79 UniProt: 1-79 [INCOMPLETE]                              Exon 1.2  PDB: B:80-103 ---------------------------------------Exon 1.4  PDB: B:143-187 UniProt: 143-187    --------------------------------------------------------Exon 1.6 UniProt: 244-271   Exon 1.7  PDB: B:272-298     ------------------------------------------------------------------------------Exon 1.10  PDB: B:379-437 (gaps) UniProt: 379-435          1.11Exon 1.12  PDB: B:442-511 (gaps) UniProt: 440-510                      ------------Exon 1.14 [INCOMPLETE]Exon 1.15           ---------------------Exon 1.17 [INCOMPLETE] Exon 1.18  PDB: B:611-637  --------------------------------------Exon 1.20           1.21   ---------------------------------------------------------------------------------------------------------------------------------------------------- Transcript 1 (1)
           Transcript 1 (2) -----------------------------------------------------------------------------------------------------Exon 1.3  PDB: B:103-142                --------------------------------------------Exon 1.5  PDB: B:187-243 UniProt: 187-243                --------------------------------------------------------Exon 1.8 UniProt: 300-325 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.13    -----------------------------------------Exon 1.16 [INCOMPLETE]-------------------------------------------------Exon 1.19  PDB: B:637-676               ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript 1 (2)
           Transcript 1 (3) -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.9  PDB: B:325-379 (gaps) UniProt: 325-379       --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript 1 (3)
                 1qxp B   2 AGIAMKLAKDREAAEGLGSHERAIKYLNQDYETLRNECLEAGALFQDPAFPPVSHSLGFKELGPNSSKTYGIKWKRPTELLSNPQFIVDGATRTDICQGALGDSWLLAAIASLTLNETILHRVVPYGQSFQEGYAGIFHFQLWQFGEWVDVVVDDLLPTKDGKLVFVHSAQGNEFWSALLEKAYAKVNGSYEALSGGCTSEAFEDFTGGVTEWYDLQKAPSDLYQIILKALERGSLLGCSIN------------KNLV-GHAYSVTDAKQVTYQGQRVNLIRMRNPWGEVEWKGPWS----EWN--DPYEREQLRVKMEDGEFWMSFRDFIREFTKLEICNLTPDALKSR--RNWNTTFYEGTWRRGSTAGGCRNYPATFWVNPQFKIRLEEVDDADDYDSRESGCSFLLALMQKHR-----FGRDMETIGFAVYQVPRELAG--PVHLKRDFFLANASRAQSEHFINLREVSNRIRLPPGEYIVVPSTFEPNKEGDFLLRFFSEKKAGTQELDDQIQANLPDEKV---------KTLF---------ISVKELQTILN---------RTNGFSLESCRSMVNLMD------LGLVEFNILWNRIRNYLTIFRKFDLDKSGSMSAYEMRMAIEAAGFKLPCQLHQVIVARFADDELIIDFDNFVRCLVRLEILFKIFKQLDPENTGTIQLDLISWLSFSVLMHYSNNESEERQFRKLFVQLMEVSATELMFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNNIKKWQGIRFETDRSGPGAFEAAGFHLNQHIYSMIIRSDETGNMDFDNFISCLVRLDAMFRAFRSLDKNGTGQIQVNIQEWLQLTMYS 893
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241 |       -    |  261       271       281       291      |  - | |  |311       321       331       341       351  |    361       371       381       391       401       411      |  -  |    431       441  |  | 450       460       470       480       490       500       510       520     |   -     |  |-       551        |-       571       581     |   -  |    601       611       621       631       641       651       661       671       681       691       701||   || |0|      732||     746|      773       783       793       805      |822       832       844       854       864       874       884         
                                                                                                                                                                                                                                                                           243          256  | |                                  298  303 |  |                                        351  |                                                             418   424                 444  |                                                                             526       537  |       550       560       570              587    594                                                                                                         702| 714| |||       733|     746|                                   802|    812|                 840|                                                  
                                                                                                                                                                                                                                                                                           259 |                                         305  |                                           354                                                                                          446                                                                                          540                                                                                                                                                                710  718 |||        738      764                                    805     820                  843                                                  
                                                                                                                                                                                                                                                                                             261                                            308                                                                                                                                                                                                                                                                                                                                                                                                               720||                                                                                                                                          
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 0|                                                                                                                                          
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                723

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric Unit(hide GO term definitions)

Chain A,B (CAN2_RAT | Q07009)

molecular function
	GO:0005509	calcium ion binding	Interacting selectively and non-covalently with calcium ions (Ca2+).
	GO:0004198	calcium-dependent cysteine-type endopeptidase activity	Catalysis of the hydrolysis of nonterminal peptide bonds in a polypeptide chain by a mechanism using a cysteine residue at the enzyme active center, and requiring the presence of calcium.
	GO:0008234	cysteine-type peptidase activity	Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile.
	GO:0008092	cytoskeletal protein binding	Interacting selectively and non-covalently with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton).
	GO:0016787	hydrolase activity	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
	GO:0046872	metal ion binding	Interacting selectively and non-covalently with any metal ion.
	GO:0008233	peptidase activity	Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid.
	GO:0005515	protein binding	Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
	GO:0046982	protein heterodimerization activity	Interacting selectively and non-covalently with a nonidentical protein to form a heterodimer.
biological process
	GO:0001824	blastocyst development	The process whose specific outcome is the progression of the blastocyst over time, from its formation to the mature structure. The mammalian blastocyst is a hollow ball of cells containing two cell types, the inner cell mass and the trophectoderm.
	GO:0071230	cellular response to amino acid stimulus	Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an amino acid stimulus. An amino acid is a carboxylic acids containing one or more amino groups.
	GO:0007520	myoblast fusion	A process in which non-proliferating myoblasts fuse to existing fibers or to myotubes to form new fibers. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers.
	GO:0016540	protein autoprocessing	Processing which a protein carries out itself. This involves actions such as the autolytic removal of residues to generate the mature form of the protein.
	GO:0006508	proteolysis	The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
	GO:0051603	proteolysis involved in cellular protein catabolic process	The hydrolysis of a peptide bond or bonds within a protein as part of the chemical reactions and pathways resulting in the breakdown of a protein by individual cells.
	GO:0051493	regulation of cytoskeleton organization	Any process that modulates the frequency, rate or extent of the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures.
	GO:0001666	response to hypoxia	Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level.
cellular component
	GO:0005794	Golgi apparatus	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions.
	GO:0000785	chromatin	The ordered and organized complex of DNA, protein, and sometimes RNA, that forms the chromosome.
	GO:0005737	cytoplasm	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
	GO:0005829	cytosol	The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
	GO:0030425	dendrite	A neuron projection that has a short, tapering, often branched, morphology, receives and integrates signals from other neurons or from sensory stimuli, and conducts a nerve impulse towards the axon or the cell body. In most neurons, the impulse is conveyed from dendrites to axon via the cell body, but in some types of unipolar neuron, the impulse does not travel via the cell body.
	GO:0005783	endoplasmic reticulum	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached).
	GO:0070062	extracellular exosome	A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm.
	GO:0005925	focal adhesion	Small region on the surface of a cell that anchors the cell to the extracellular matrix and that forms a point of termination of actin filaments.
	GO:0005622	intracellular	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
	GO:0005764	lysosome	A small lytic vacuole that has cell cycle-independent morphology and is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions.
	GO:0016020	membrane	A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
	GO:0045121	membrane raft	Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions.
	GO:0005634	nucleus	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
	GO:0097038	perinuclear endoplasmic reticulum	The portion of endoplasmic reticulum, the intracellular network of tubules and cisternae, that occurs near the nucleus. The lumen of the perinuclear endoplasmic reticulum is contiguous with the nuclear envelope lumen (also called perinuclear space), the region between the inner and outer nuclear membranes.
	GO:0005886	plasma membrane	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
	GO:0031143	pseudopodium	A temporary protrusion or retractile process of a cell, associated with flowing movements of the protoplasm, and serving for locomotion and feeding.

Chain A,B (CAN1_RAT | P97571)

molecular function
	GO:0005509	calcium ion binding	Interacting selectively and non-covalently with calcium ions (Ca2+).
	GO:0004198	calcium-dependent cysteine-type endopeptidase activity	Catalysis of the hydrolysis of nonterminal peptide bonds in a polypeptide chain by a mechanism using a cysteine residue at the enzyme active center, and requiring the presence of calcium.
	GO:0008234	cysteine-type peptidase activity	Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile.
	GO:0008092	cytoskeletal protein binding	Interacting selectively and non-covalently with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton).
	GO:0016787	hydrolase activity	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
	GO:0046872	metal ion binding	Interacting selectively and non-covalently with any metal ion.
	GO:0008233	peptidase activity	Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid.
	GO:0005515	protein binding	Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
biological process
	GO:0016540	protein autoprocessing	Processing which a protein carries out itself. This involves actions such as the autolytic removal of residues to generate the mature form of the protein.
	GO:0006508	proteolysis	The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
cellular component
	GO:0005737	cytoplasm	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
	GO:0005622	intracellular	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
	GO:0016020	membrane	A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
	GO:0005886	plasma membrane	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (0, 0)

Sites (0, 0)

SS Bonds (0, 0)

Cis Peptide Bonds (1, 1)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (4, 20)

Exons (21, 42)

Sequences/Alignments

Classification and Annotation

SCOP Domains (4, 8)

CATH Domains (2, 6)

Pfam Domains (3, 8)

Gene Ontology (33, 47)

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Databases and Analysis Tools

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Related Entries

Entries Sharing at Least One Protein Chain (UniProt ID)

Related Entries Specified in the PDB File