Chain A from PDB Type:PROTEIN Length:127
aligned with RIDA_ECOL6 | P0AF94 from UniProtKB/Swiss-Prot Length:128
Alignment length:127
11 21 31 41 51 61 71 81 91 101 111 121
RIDA_ECOL6 2 SKTIATENAPAAIGPYVQGVDLGNMIITSGQIPVNPKTGEVPADVAAQARQSLDNVKAIVEAAGLKVGDIVKTTVFVKDLNDFATVNATYEAFFTEHNATFPARSCVEVARLPKDVKIEIEAIAVRR 128
SCOP domains d1qu9a_ A: Conserved 'hypothetical' protein YjgF SCOP domains
CATH domains 1qu9A00 A:2-128 [code=3.30.1330.40, no name defined] CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eee..............eee...eeee...............hhhhhhhhhhhhhhhhhhhh..hhh.eeeeeeee.hhhhhhhhhhhhhhhhhhh.....eeeeee...hhhhh.eeeeeeee.. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (2) -----------------------------------------------------------------------------------------------------UPF0076 ------- PROSITE (2)
Transcript ------------------------------------------------------------------------------------------------------------------------------- Transcript
1qu9 A 2 SKTIATENAPAAIGPYVQGVDLGNMIITSGQIPVNPKTGEVPADVAAQARQSLDNVKAIVEAAGLKVGDIVKTTVFVKDLNDFATVNATYEAFFTEHNATFPARScVEVARLPKDVKIEIEAIAVRR 128
11 21 31 41 51 61 71 81 91 101 | 111 121
107-CSP
Chain A from PDB Type:PROTEIN Length:127
aligned with RIDA_ECOLI | P0AF93 from UniProtKB/Swiss-Prot Length:128
Alignment length:127
11 21 31 41 51 61 71 81 91 101 111 121
RIDA_ECOLI 2 SKTIATENAPAAIGPYVQGVDLGNMIITSGQIPVNPKTGEVPADVAAQARQSLDNVKAIVEAAGLKVGDIVKTTVFVKDLNDFATVNATYEAFFTEHNATFPARSCVEVARLPKDVKIEIEAIAVRR 128
SCOP domains d1qu9a_ A: Conserved 'hypothetical' protein YjgF SCOP domains
CATH domains 1qu9A00 A:2-128 [code=3.30.1330.40, no name defined] CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eee..............eee...eeee...............hhhhhhhhhhhhhhhhhhhh..hhh.eeeeeeee.hhhhhhhhhhhhhhhhhhh.....eeeeee...hhhhh.eeeeeeee.. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (2) ------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
PROSITE (3) -----------------------------------------------------------------------------------------------------UPF0076 ------- PROSITE (3)
Transcript ------------------------------------------------------------------------------------------------------------------------------- Transcript
1qu9 A 2 SKTIATENAPAAIGPYVQGVDLGNMIITSGQIPVNPKTGEVPADVAAQARQSLDNVKAIVEAAGLKVGDIVKTTVFVKDLNDFATVNATYEAFFTEHNATFPARScVEVARLPKDVKIEIEAIAVRR 128
11 21 31 41 51 61 71 81 91 101 | 111 121
107-CSP
Chain A from PDB Type:PROTEIN Length:127
aligned with RIDA_SHIFL | P0AF95 from UniProtKB/Swiss-Prot Length:128
Alignment length:127
11 21 31 41 51 61 71 81 91 101 111 121
RIDA_SHIFL 2 SKTIATENAPAAIGPYVQGVDLGNMIITSGQIPVNPKTGEVPADVAAQARQSLDNVKAIVEAAGLKVGDIVKTTVFVKDLNDFATVNATYEAFFTEHNATFPARSCVEVARLPKDVKIEIEAIAVRR 128
SCOP domains d1qu9a_ A: Conserved 'hypothetical' protein YjgF SCOP domains
CATH domains 1qu9A00 A:2-128 [code=3.30.1330.40, no name defined] CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eee..............eee...eeee...............hhhhhhhhhhhhhhhhhhhh..hhh.eeeeeeee.hhhhhhhhhhhhhhhhhhh.....eeeeee...hhhhh.eeeeeeee.. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -----------------------------------------------------------------------------------------------------UPF0076 ------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------- Transcript
1qu9 A 2 SKTIATENAPAAIGPYVQGVDLGNMIITSGQIPVNPKTGEVPADVAAQARQSLDNVKAIVEAAGLKVGDIVKTTVFVKDLNDFATVNATYEAFFTEHNATFPARScVEVARLPKDVKIEIEAIAVRR 128
11 21 31 41 51 61 71 81 91 101 | 111 121
107-CSP
Chain B from PDB Type:PROTEIN Length:127
aligned with RIDA_ECOL6 | P0AF94 from UniProtKB/Swiss-Prot Length:128
Alignment length:127
11 21 31 41 51 61 71 81 91 101 111 121
RIDA_ECOL6 2 SKTIATENAPAAIGPYVQGVDLGNMIITSGQIPVNPKTGEVPADVAAQARQSLDNVKAIVEAAGLKVGDIVKTTVFVKDLNDFATVNATYEAFFTEHNATFPARSCVEVARLPKDVKIEIEAIAVRR 128
SCOP domains d1qu9b_ B: Conserved 'hypothetical' protein YjgF SCOP domains
CATH domains 1qu9B00 B:2-128 [code=3.30.1330.40, no name defined] CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eee..............eee...eeee...............hhhhhhhhhhhhhhhhhhhh..hhh.eeeeeeee.hhhhhhhhhhhhhhhhhhh.....eeeeee...hhhhh.eeeeeeee.. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (2) -----------------------------------------------------------------------------------------------------UPF0076 ------- PROSITE (2)
Transcript ------------------------------------------------------------------------------------------------------------------------------- Transcript
1qu9 B 2 SKTIATENAPAAIGPYVQGVDLGNMIITSGQIPVNPKTGEVPADVAAQARQSLDNVKAIVEAAGLKVGDIVKTTVFVKDLNDFATVNATYEAFFTEHNATFPARScVEVARLPKDVKIEIEAIAVRR 128
11 21 31 41 51 61 71 81 91 101 | 111 121
107-CSP
Chain B from PDB Type:PROTEIN Length:127
aligned with RIDA_ECOLI | P0AF93 from UniProtKB/Swiss-Prot Length:128
Alignment length:127
11 21 31 41 51 61 71 81 91 101 111 121
RIDA_ECOLI 2 SKTIATENAPAAIGPYVQGVDLGNMIITSGQIPVNPKTGEVPADVAAQARQSLDNVKAIVEAAGLKVGDIVKTTVFVKDLNDFATVNATYEAFFTEHNATFPARSCVEVARLPKDVKIEIEAIAVRR 128
SCOP domains d1qu9b_ B: Conserved 'hypothetical' protein YjgF SCOP domains
CATH domains 1qu9B00 B:2-128 [code=3.30.1330.40, no name defined] CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eee..............eee...eeee...............hhhhhhhhhhhhhhhhhhhh..hhh.eeeeeeee.hhhhhhhhhhhhhhhhhhh.....eeeeee...hhhhh.eeeeeeee.. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (2) ------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
PROSITE (3) -----------------------------------------------------------------------------------------------------UPF0076 ------- PROSITE (3)
Transcript ------------------------------------------------------------------------------------------------------------------------------- Transcript
1qu9 B 2 SKTIATENAPAAIGPYVQGVDLGNMIITSGQIPVNPKTGEVPADVAAQARQSLDNVKAIVEAAGLKVGDIVKTTVFVKDLNDFATVNATYEAFFTEHNATFPARScVEVARLPKDVKIEIEAIAVRR 128
11 21 31 41 51 61 71 81 91 101 | 111 121
107-CSP
Chain B from PDB Type:PROTEIN Length:127
aligned with RIDA_SHIFL | P0AF95 from UniProtKB/Swiss-Prot Length:128
Alignment length:127
11 21 31 41 51 61 71 81 91 101 111 121
RIDA_SHIFL 2 SKTIATENAPAAIGPYVQGVDLGNMIITSGQIPVNPKTGEVPADVAAQARQSLDNVKAIVEAAGLKVGDIVKTTVFVKDLNDFATVNATYEAFFTEHNATFPARSCVEVARLPKDVKIEIEAIAVRR 128
SCOP domains d1qu9b_ B: Conserved 'hypothetical' protein YjgF SCOP domains
CATH domains 1qu9B00 B:2-128 [code=3.30.1330.40, no name defined] CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eee..............eee...eeee...............hhhhhhhhhhhhhhhhhhhh..hhh.eeeeeeee.hhhhhhhhhhhhhhhhhhh.....eeeeee...hhhhh.eeeeeeee.. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -----------------------------------------------------------------------------------------------------UPF0076 ------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------- Transcript
1qu9 B 2 SKTIATENAPAAIGPYVQGVDLGNMIITSGQIPVNPKTGEVPADVAAQARQSLDNVKAIVEAAGLKVGDIVKTTVFVKDLNDFATVNATYEAFFTEHNATFPARScVEVARLPKDVKIEIEAIAVRR 128
11 21 31 41 51 61 71 81 91 101 | 111 121
107-CSP
Chain C from PDB Type:PROTEIN Length:127
aligned with RIDA_ECOL6 | P0AF94 from UniProtKB/Swiss-Prot Length:128
Alignment length:127
11 21 31 41 51 61 71 81 91 101 111 121
RIDA_ECOL6 2 SKTIATENAPAAIGPYVQGVDLGNMIITSGQIPVNPKTGEVPADVAAQARQSLDNVKAIVEAAGLKVGDIVKTTVFVKDLNDFATVNATYEAFFTEHNATFPARSCVEVARLPKDVKIEIEAIAVRR 128
SCOP domains d1qu9c_ C: Conserved 'hypothetical' protein YjgF SCOP domains
CATH domains 1qu9C00 C:2-128 [code=3.30.1330.40, no name defined] CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eee..............eee...eeee...............hhhhhhhhhhhhhhhhhhhh..hhh.eeeeeeee.hhhhhhhhhhhhhhhhhhh.....eeeeee...hhhhh.eeeeeeee.. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (2) -----------------------------------------------------------------------------------------------------UPF0076 ------- PROSITE (2)
Transcript ------------------------------------------------------------------------------------------------------------------------------- Transcript
1qu9 C 2 SKTIATENAPAAIGPYVQGVDLGNMIITSGQIPVNPKTGEVPADVAAQARQSLDNVKAIVEAAGLKVGDIVKTTVFVKDLNDFATVNATYEAFFTEHNATFPARScVEVARLPKDVKIEIEAIAVRR 128
11 21 31 41 51 61 71 81 91 101 | 111 121
107-CSP
Chain C from PDB Type:PROTEIN Length:127
aligned with RIDA_ECOLI | P0AF93 from UniProtKB/Swiss-Prot Length:128
Alignment length:127
11 21 31 41 51 61 71 81 91 101 111 121
RIDA_ECOLI 2 SKTIATENAPAAIGPYVQGVDLGNMIITSGQIPVNPKTGEVPADVAAQARQSLDNVKAIVEAAGLKVGDIVKTTVFVKDLNDFATVNATYEAFFTEHNATFPARSCVEVARLPKDVKIEIEAIAVRR 128
SCOP domains d1qu9c_ C: Conserved 'hypothetical' protein YjgF SCOP domains
CATH domains 1qu9C00 C:2-128 [code=3.30.1330.40, no name defined] CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eee..............eee...eeee...............hhhhhhhhhhhhhhhhhhhh..hhh.eeeeeeee.hhhhhhhhhhhhhhhhhhh.....eeeeee...hhhhh.eeeeeeee.. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (2) ------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
PROSITE (3) -----------------------------------------------------------------------------------------------------UPF0076 ------- PROSITE (3)
Transcript ------------------------------------------------------------------------------------------------------------------------------- Transcript
1qu9 C 2 SKTIATENAPAAIGPYVQGVDLGNMIITSGQIPVNPKTGEVPADVAAQARQSLDNVKAIVEAAGLKVGDIVKTTVFVKDLNDFATVNATYEAFFTEHNATFPARScVEVARLPKDVKIEIEAIAVRR 128
11 21 31 41 51 61 71 81 91 101 | 111 121
107-CSP
Chain C from PDB Type:PROTEIN Length:127
aligned with RIDA_SHIFL | P0AF95 from UniProtKB/Swiss-Prot Length:128
Alignment length:127
11 21 31 41 51 61 71 81 91 101 111 121
RIDA_SHIFL 2 SKTIATENAPAAIGPYVQGVDLGNMIITSGQIPVNPKTGEVPADVAAQARQSLDNVKAIVEAAGLKVGDIVKTTVFVKDLNDFATVNATYEAFFTEHNATFPARSCVEVARLPKDVKIEIEAIAVRR 128
SCOP domains d1qu9c_ C: Conserved 'hypothetical' protein YjgF SCOP domains
CATH domains 1qu9C00 C:2-128 [code=3.30.1330.40, no name defined] CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eee..............eee...eeee...............hhhhhhhhhhhhhhhhhhhh..hhh.eeeeeeee.hhhhhhhhhhhhhhhhhhh.....eeeeee...hhhhh.eeeeeeee.. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -----------------------------------------------------------------------------------------------------UPF0076 ------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------- Transcript
1qu9 C 2 SKTIATENAPAAIGPYVQGVDLGNMIITSGQIPVNPKTGEVPADVAAQARQSLDNVKAIVEAAGLKVGDIVKTTVFVKDLNDFATVNATYEAFFTEHNATFPARScVEVARLPKDVKIEIEAIAVRR 128
11 21 31 41 51 61 71 81 91 101 | 111 121
107-CSP
Legend: |
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→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |