1QHA - JenaLib

Asym./Biol. Unit (Jmol Viewer)

Asym./Biol. Unit - sites (Jmol Viewer)

Title :   HUMAN HEXOKINASE TYPE I COMPLEXED WITH ATP ANALOGUE AMP-PNP

Authors :   C. Rosano, E. Sabini, D. Deriu, M. Magnani, M. Bolognesi

Date :   11 May 99 (Deposition) - 10 Nov 99 (Release) - 24 Feb 09 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.25

Chains :   Asym./Biol. Unit : A,B

Keywords :   Kinase, Glycolysis, Phosphotransferase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   C. Rosano, E. Sabini, M. Rizzi, D. Deriu, G. Murshudov, M. Bianchi, G. Serafini, M. Magnani, M. Bolognesi
Binding Of Non-Catalytic Atp To Human Hexokinase I Highlights The Structural Components For Enzyme-Membrane Association Control.
Structure Fold. Des. V. 7 1427 1999
PubMed-ID: 10574795 | Reference-DOI: 10.1016/S0969-2126(00)80032-5
(for further references see the PDB file header)

Molecule 1 - PROTEIN (HEXOKINASE)
	Chains	:	A, B
	EC Number	:	2.7.1.1
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Taxid	:	562
	Organism Common	:	HUMAN
	Organism Scientific	:	HOMO SAPIENS
	Organism Taxid	:	9606
	Other Details	:	COMPLEXED WITH ATP ANALOGUE AMP-PNP

		1	2
Asymmetric/Biological Unit	:	A	B

Summary Information (see also Sequences/Alignments below)

Asymmetric/Biological Unit (4, 16)

No.	Name	Count	Type	Full Name
1	ANP	2	Ligand/Ion	PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
2	G6P	4	Ligand/Ion	ALPHA-D-GLUCOSE-6-PHOSPHATE
3	GLC	4	Ligand/Ion	ALPHA-D-GLUCOSE
4	MG	6	Ligand/Ion	MAGNESIUM ION

Asymmetric Unit (16, 16)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	SER A:155 , PHE A:156 , PRO A:157 , THR A:172 , LYS A:173 , ASN A:208 , ASP A:209 , ILE A:229 , GLY A:233 , THR A:234 , ASN A:235 , GLU A:260 , GLN A:291 , GLU A:294 , HOH A:1109 , HOH A:1178	BINDING SITE FOR RESIDUE GLC A 918
02	AC2	SOFTWARE	ASP A:84 , SER A:88 , ASP A:209 , GLY A:231 , THR A:232 , ASP A:413 , GLY A:414 , SER A:415 , GLY A:448 , SER A:449 , HOH A:1028 , HOH A:1033 , HOH A:1178	BINDING SITE FOR RESIDUE G6P A 919
03	AC3	SOFTWARE	SER A:603 , PHE A:604 , PRO A:605 , THR A:620 , LYS A:621 , ASN A:656 , ASP A:657 , ILE A:677 , GLY A:681 , SER A:682 , ASN A:683 , GLU A:708 , GLU A:742 , HOH A:1060 , HOH A:1183	BINDING SITE FOR RESIDUE GLC A 920
04	AC4	SOFTWARE	ASP A:532 , GLY A:535 , THR A:536 , SER A:603 , ASP A:657 , GLY A:679 , THR A:680 , ASP A:861 , GLY A:862 , THR A:863 , GLY A:896 , SER A:897 , HOH A:1060 , HOH A:1098 , HOH A:1145	BINDING SITE FOR RESIDUE G6P A 921
05	AC5	SOFTWARE	SER B:155 , PHE B:156 , PRO B:157 , THR B:172 , LYS B:173 , ASN B:208 , ASP B:209 , ILE B:229 , GLY B:233 , THR B:234 , ASN B:235 , GLU B:260 , GLN B:291 , GLU B:294 , HOH B:2040 , HOH B:2129	BINDING SITE FOR RESIDUE GLC B 1915
06	AC6	SOFTWARE	ASP B:84 , GLY B:87 , SER B:88 , ASP B:209 , THR B:232 , ASP B:413 , GLY B:414 , SER B:415 , GLY B:448 , SER B:449 , HOH B:2027 , HOH B:2118 , HOH B:2129 , HOH B:2250	BINDING SITE FOR RESIDUE G6P B 1916
07	AC7	SOFTWARE	SER B:603 , PHE B:604 , PRO B:605 , THR B:620 , LYS B:621 , ASN B:656 , ASP B:657 , ILE B:677 , SER B:682 , ASN B:683 , GLU B:708 , GLU B:742 , HOH B:2042 , HOH B:2141	BINDING SITE FOR RESIDUE GLC B 1917
08	AC8	SOFTWARE	ASP B:532 , GLY B:535 , THR B:536 , ASP B:657 , GLY B:679 , THR B:680 , ASP B:861 , GLY B:862 , THR B:863 , GLY B:896 , SER B:897 , HOH B:2042 , HOH B:2196 , HOH B:2227	BINDING SITE FOR RESIDUE G6P B 1918
09	AC9	SOFTWARE	MET B:690 , VAL B:693 , VAL B:696 , GLY B:698 , ASP B:699	BINDING SITE FOR RESIDUE MG B 1919
10	BC1	SOFTWARE	LEU B:242 , ILE B:245 , VAL B:248 , GLY B:250 , HOH B:2004	BINDING SITE FOR RESIDUE MG B 1920
11	BC2	SOFTWARE	LEU A:242 , ILE A:245 , VAL A:248 , GLY A:250	BINDING SITE FOR RESIDUE MG A 922
12	BC3	SOFTWARE	MET A:690 , VAL A:693 , VAL A:696 , GLY A:698	BINDING SITE FOR RESIDUE MG A 923
13	BC4	SOFTWARE	ANP A:999	BINDING SITE FOR RESIDUE MG A 924
14	BC5	SOFTWARE	ANP B:1999	BINDING SITE FOR RESIDUE MG B 1921
15	BC6	SOFTWARE	ARG A:30 , LEU A:31 , ASN A:345 , HIS A:373 , PHE A:380 , ASN A:384 , GLN A:422 , ARG A:425 , ARG A:426 , MG A:924	BINDING SITE FOR RESIDUE ANP A 999
16	BC7	SOFTWARE	ARG B:30 , LEU B:31 , HIS B:373 , THR B:376 , PHE B:380 , ASN B:384 , ARG B:425 , ARG B:426 , LYS B:429 , MG B:1921 , HOH B:2043	BINDING SITE FOR RESIDUE ANP B 1999

(no "SS Bond" information available for 1QHA)

(no "Cis Peptide Bond" information available for 1QHA)

Asymmetric/Biological Unit (3, 6)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
1	UniProt	VAR_009878	L	529	S	HXK1_HUMAN	Disease (HK deficiency)	137853249	A/B	L	529	S
2	UniProt	VAR_023780	T	680	S	HXK1_HUMAN	Disease (HK deficiency)	398122379	A/B	T	680	S
3	UniProt	VAR_023781	L	776	M	HXK1_HUMAN	Polymorphism	1054203	A/B	L	776	M

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

Asymmetric/Biological Unit (2, 8)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	HEXOKINASE_2	PS51748	Hexokinase domain profile.	HXK1_HUMAN	16-458 464-906	4	A:16-458 B:16-458 A:464-906 B:464-906
2	HEXOKINASE_1	PS00378	Hexokinase domain signature.	HXK1_HUMAN	150-175 598-623	4	A:150-175 B:150-175 A:598-623 B:598-623

Asymmetric/Biological Unit (18, 36)

	ENSEMBL					UniProtKB			PDB
No.	Transcript ID	Exon	Exon ID	Genome Location	Length	ID	Location	Length	Count	Location	Length
1.11	ENST00000359426	11	ENSE00001460188	chr10:71078600-71078766	167	HXK1_HUMAN	1-21	21	2	A:12-21 B:16-21	10 6
1.15c	ENST00000359426	15c	ENSE00001746665	chr10:71103583-71103745	163	HXK1_HUMAN	22-76	55	2	A:22-76 B:22-76	55 55
1.16b	ENST00000359426	16b	ENSE00001199105	chr10:71119653-71119801	149	HXK1_HUMAN	76-125	50	2	A:76-125 B:76-125	50 50
1.17c	ENST00000359426	17c	ENSE00001145342	chr10:71124539-71124658	120	HXK1_HUMAN	126-165	40	2	A:126-165 B:126-165	40 40
1.18	ENST00000359426	18	ENSE00001145338	chr10:71128292-71128387	96	HXK1_HUMAN	166-197	32	2	A:166-197 B:166-197	32 32
1.19	ENST00000359426	19	ENSE00001145331	chr10:71128993-71129092	100	HXK1_HUMAN	198-231	34	2	A:198-231 B:198-231	34 34
1.20b	ENST00000359426	20b	ENSE00002165681	chr10:71129197-71129380	184	HXK1_HUMAN	231-292	62	2	A:231-292 B:231-292	62 62
1.21b	ENST00000359426	21b	ENSE00001145318	chr10:71136690-71136845	156	HXK1_HUMAN	292-344	53	2	A:292-344 B:292-344	53 53
1.22	ENST00000359426	22	ENSE00001145251	chr10:71139618-71139851	234	HXK1_HUMAN	344-422	79	2	A:344-422 B:344-422	79 79
1.23	ENST00000359426	23	ENSE00001145307	chr10:71142243-71142547	305	HXK1_HUMAN	422-524	103	2	A:422-524 B:422-524	103 103
1.24a	ENST00000359426	24a	ENSE00001145304	chr10:71144089-71144237	149	HXK1_HUMAN	524-573	50	2	A:524-573 B:524-573	50 50
1.24c	ENST00000359426	24c	ENSE00001276961	chr10:71144552-71144671	120	HXK1_HUMAN	574-613	40	2	A:574-613 B:574-613	40 40
1.25a	ENST00000359426	25a	ENSE00001276429	chr10:71146079-71146174	96	HXK1_HUMAN	614-645	32	2	A:614-645 B:614-645	32 32
1.26	ENST00000359426	26	ENSE00001755911	chr10:71148953-71149052	100	HXK1_HUMAN	646-679	34	2	A:646-679 B:646-679	34 34
1.27b	ENST00000359426	27b	ENSE00001145280	chr10:71151881-71152064	184	HXK1_HUMAN	679-740	62	2	A:679-740 B:679-740	62 62
1.28	ENST00000359426	28	ENSE00001615072	chr10:71154706-71154861	156	HXK1_HUMAN	740-792	53	2	A:740-792 B:740-792	53 53
1.29	ENST00000359426	29	ENSE00001145266	chr10:71158351-71158584	234	HXK1_HUMAN	792-870	79	2	A:792-870 B:792-870	79 79
1.30c	ENST00000359426	30c	ENSE00001815320	chr10:71160747-71161638	892	HXK1_HUMAN	870-917	48	2	A:870-914 B:870-914	45 45

Asymmetric/Biological Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:903
 aligned with HXK1_HUMAN | P19367 from UniProtKB/Swiss-Prot  Length:917

    Alignment length:903
                                    21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541       551       561       571       581       591       601       611       621       631       641       651       661       671       681       691       701       711       721       731       741       751       761       771       781       791       801       811       821       831       841       851       861       871       881       891       901       911   
           HXK1_HUMAN    12 TELKDDQVKKIDKYLYAMRLSDETLIDIMTRFRKEMKNGLSRDFNPTATVKMLPTFVRSIPDGSEKGDFIALDLGGSSFRILRVQVNHEKNQNVHMESEVYDTPENIVHGSGSQLFDHVAECLGDFMEKRKIKDKKLPVGFTFSFPCQQSKIDEAILITWTKRFKASGVEGADVVKLLNKAIKKRGDYDANIVAVVNDTVGTMMTCGYDDQHCEVGLIIGTGTNACYMEELRHIDLVEGDEGRMCINTEWGAFGDDGSLEDIRTEFDREIDRGSLNPGKQLFEKMVSGMYLGELVRLILVKMAKEGLLFEGRITPELLTRGKFNTSDVSAIEKNKEGLHNAKEILTRLGVEPSDDDCVSVQHVCTIVSFRSANLVAATLGAILNRLRDNKGTPRLRTTVGVDGSLYKTHPQYSRRFHKTLRRLVPDSDVRFLLSESGSGKGAAMVTAVAYRLAEQHRQIEETLAHFHLTKDMLLEVKKRMRAEMELGLRKQTHNNAVVKMLPSFVRRTPDGTENGDFLALDLGGTNFRVLLVKIRSGKKRTVEMHNKIYAIPIEIMQGTGEELFDHIVSCISDFLDYMGIKGPRMPLGFTFSFPCQQTSLDAGILITWTKGFKATDCVGHDVVTLLRDAIKRREEFDLDVVAVVNDTVGTMMTCAYEEPTCEVGLIVGTGSNACYMEEMKNVEMVEGDQGQMCINMEWGAFGDNGCLDDIRTHYDRLVDEYSLNAGKQRYEKMISGMYLGEIVRNILIDFTKKGFLFRGQISETLKTRGIFETKFLSQIESDRLALLQVRAILQQLGLNSTCDDSILVKTVCGVVSRRAAQLCGAGMAAVVDKIRENRGLDRLNVTVGVDGTLYKLHPHFSRIMHQTVKELSPKCNVSFLLSEDGSGKGAALITAVGVRLRTE 914
               SCOP domains d1qhaa1 A:12-222 Mammalian type I hexokinase                                                                                                                                                                       d1qhaa2 A:223-465 Mammalian type I hexokinase                                                                                                                                                                                                      d1qhaa3 A:466-670 Mammalian type I hexokinase                                                                                                                                                                d1qhaa4 A:671-914 Mammalian type I hexokinase                                                                                                                                                                                                        SCOP domains
               CATH domains ----1qhaA02 A:16-53,A:223-445             1qhaA01 A:54-222,A:446-463  [code=3.30.420.40, no name defined]                                                                                                          1qhaA02 A:16-53,A:223-445  [code=3.40.367.20, no name defined]                                                                                                                                                                 1qhaA01           -----------------1qhaA04 A:481-512,A:671-892     1qhaA03 A:513-670,A:894-914  [code=3.30.420.40, no name defined]                                                                                              1qhaA04 A:481-512,A:671-892  [code=3.40.367.20, no name defined]                                                                                                                                                              -1qhaA03               CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......hhhhhhhh.hhh...hhhhhhhhhhhhhhhhhhh..........................eee..eee.......eeeee........eeee......hhhh...hhhhhhhhhhhhhhhhhh........eeeeee..eee.......eeee..............hhhhhhhhhhhh.....eeeeee.hhhhhhhhhhhh...eeeeeee...eeeeeeeehhh.........eeeee..hhh............hhhhhhhhh.........hhhh.hhhhhhhhhhhhhhhhhh...hhh.............hhhhhhh.....hhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....eeeeeeee.hhhhh...hhhhhhhhhhhh...eeeeeee.....hhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhh..........................eeeeeeee....eeeeeeeee.....eeeeeeeee...hhhh....hhhhhhhhhhhhhhhhh........eeeeee..............................hhhhhhhhhhhh.....eeeeee.hhhhhhhhhhh....eeeeeee...eeeeeeeehhh.........eeeee..hhh............hhhhhhhh........hhhhh.....hhhhhhhhhhhhhh....hhh.............hhhhhhh......hhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....eeeeeeee.hhhhh...hhhhhhhhhhhh...eeeeeee.....hhhhhhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------S------------------------------------------------------------------------------------------------------------------------------------------------------S-----------------------------------------------------------------------------------------------M------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                PROSITE (1) ----HEXOKINASE_2  PDB: A:16-458 UniProt: 16-458                                                                                                                                                                                                                                                                                                                                                                                                                -----HEXOKINASE_2  PDB: A:464-906 UniProt: 464-906                                                                                                                                                                                                                                                                                                                                                                                                              -------- PROSITE (1)
                PROSITE (2) ------------------------------------------------------------------------------------------------------------------------------------------HEXOKINASE_1              --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HEXOKINASE_1              --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
           Transcript 1 (1) Exon 1.11 Exon 1.15c  PDB: A:22-76 UniProt: 22-76                -------------------------------------------------Exon 1.17c  PDB: A:126-165              Exon 1.18  PDB: A:166-197       Exon 1.19  PDB: A:198-231         ------------------------------------------------------------Exon 1.21b  PDB: A:292-344 UniProt: 292-344          -----------------------------------------------------------------------------Exon 1.23  PDB: A:422-524 UniProt: 422-524                                                             -------------------------------------------------Exon 1.24c  PDB: A:574-613              Exon 1.25a  PDB: A:614-645      Exon 1.26  PDB: A:646-679         ------------------------------------------------------------Exon 1.28  PDB: A:740-792 UniProt: 740-792           -----------------------------------------------------------------------------Exon 1.30c  PDB: A:870-914 UniProt: 870-917   Transcript 1 (1)
           Transcript 1 (2) ----------------------------------------------------------------Exon 1.16b  PDB: A:76-125 UniProt: 76-125         ---------------------------------------------------------------------------------------------------------Exon 1.20b  PDB: A:231-292 UniProt: 231-292                   ---------------------------------------------------Exon 1.22  PDB: A:344-422 UniProt: 344-422                                     -----------------------------------------------------------------------------------------------------Exon 1.24a  PDB: A:524-573 UniProt: 524-573       ---------------------------------------------------------------------------------------------------------Exon 1.27b  PDB: A:679-740 UniProt: 679-740                   ---------------------------------------------------Exon 1.29  PDB: A:792-870 UniProt: 792-870                                     -------------------------------------------- Transcript 1 (2)
                 1qha A  12 TELKDDQVKKIDKYLYAMRLSDETLIDIMTRFRKEMKNGLSRDFNPTATVKMLPTFVRSIPDGSEKGDFIALDLGGSSFRILRVQVNHEKNQNVHMESEVYDTPENIVHGSGSQLFDHVAECLGDFMEKRKIKDKKLPVGFTFSFPCQQSKIDEAILITWTKRFKASGVEGADVVKLLNKAIKKRGDYDANIVAVVNDTVGTMMTCGYDDQHCEVGLIIGTGTNACYMEELRHIDLVEGDEGRMCINTEWGAFGDDGSLEDIRTEFDREIDRGSLNPGKQLFEKMVSGMYLGELVRLILVKMAKEGLLFEGRITPELLTRGKFNTSDVSAIEKNKEGLHNAKEILTRLGVEPSDDDCVSVQHVCTIVSFRSANLVAATLGAILNRLRDNKGTPRLRTTVGVDGSLYKTHPQYSRRFHKTLRRLVPDSDVRFLLSESGSGKGAAMVTAVAYRLAEQHRQIEETLAHFHLTKDMLLEVKKRMRAEMELGLRKQTHNNAVVKMLPSFVRRTPDGTENGDFLALDLGGTNFRVLLVKIRSGKKRTVEMHNKIYAIPIEIMQGTGEELFDHIVSCISDFLDYMGIKGPRMPLGFTFSFPCQQTSLDAGILITWTKGFKATDCVGHDVVTLLRDAIKRREEFDLDVVAVVNDTVGTMMTCAYEEPTCEVGLIVGTGSNACYMEEMKNVEMVEGDQGQMCINMEWGAFGDNGCLDDIRTHYDRLVNEYSLNAGKQRYEKMISGMYLGEIVRNILIDFTKKGFLFRGQISETLKTRGIFETKFLSQIESDRLALLQVRAILQQLGLNSTCDDSILVKTVCGVVSRRAAQLCGAGMAAVVDKIRENRGLDRLNVTVGVDGTLYKLHPHFSRIMHQTVKELSPKCNVSFLLSEDGSGKGAALITAVGVRLRTE 914
                                    21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541       551       561       571       581       591       601       611       621       631       641       651       661       671       681       691       701       711       721       731       741       751       761       771       781       791       801       811       821       831       841       851       861       871       881       891       901       911

Chain B from PDB  Type:PROTEIN  Length:899
 aligned with HXK1_HUMAN | P19367 from UniProtKB/Swiss-Prot  Length:917

    Alignment length:899
                                    25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415       425       435       445       455       465       475       485       495       505       515       525       535       545       555       565       575       585       595       605       615       625       635       645       655       665       675       685       695       705       715       725       735       745       755       765       775       785       795       805       815       825       835       845       855       865       875       885       895       905         
           HXK1_HUMAN    16 DDQVKKIDKYLYAMRLSDETLIDIMTRFRKEMKNGLSRDFNPTATVKMLPTFVRSIPDGSEKGDFIALDLGGSSFRILRVQVNHEKNQNVHMESEVYDTPENIVHGSGSQLFDHVAECLGDFMEKRKIKDKKLPVGFTFSFPCQQSKIDEAILITWTKRFKASGVEGADVVKLLNKAIKKRGDYDANIVAVVNDTVGTMMTCGYDDQHCEVGLIIGTGTNACYMEELRHIDLVEGDEGRMCINTEWGAFGDDGSLEDIRTEFDREIDRGSLNPGKQLFEKMVSGMYLGELVRLILVKMAKEGLLFEGRITPELLTRGKFNTSDVSAIEKNKEGLHNAKEILTRLGVEPSDDDCVSVQHVCTIVSFRSANLVAATLGAILNRLRDNKGTPRLRTTVGVDGSLYKTHPQYSRRFHKTLRRLVPDSDVRFLLSESGSGKGAAMVTAVAYRLAEQHRQIEETLAHFHLTKDMLLEVKKRMRAEMELGLRKQTHNNAVVKMLPSFVRRTPDGTENGDFLALDLGGTNFRVLLVKIRSGKKRTVEMHNKIYAIPIEIMQGTGEELFDHIVSCISDFLDYMGIKGPRMPLGFTFSFPCQQTSLDAGILITWTKGFKATDCVGHDVVTLLRDAIKRREEFDLDVVAVVNDTVGTMMTCAYEEPTCEVGLIVGTGSNACYMEEMKNVEMVEGDQGQMCINMEWGAFGDNGCLDDIRTHYDRLVDEYSLNAGKQRYEKMISGMYLGEIVRNILIDFTKKGFLFRGQISETLKTRGIFETKFLSQIESDRLALLQVRAILQQLGLNSTCDDSILVKTVCGVVSRRAAQLCGAGMAAVVDKIRENRGLDRLNVTVGVDGTLYKLHPHFSRIMHQTVKELSPKCNVSFLLSEDGSGKGAALITAVGVRLRTE 914
               SCOP domains d1qhab1 B:16-222 Mammalian type I hexokinase                                                                                                                                                                   d1qhab2 B:223-465 Mammalian type I hexokinase                                                                                                                                                                                                      d1qhab3 B:466-670 Mammalian type I hexokinase                                                                                                                                                                d1qhab4 B:671-914 Mammalian type I hexokinase                                                                                                                                                                                                        SCOP domains
               CATH domains 1qhaB02 B:16-53,B:223-445             1qhaB01 B:54-222,B:446-463  [code=3.30.420.40, no name defined]                                                                                                          1qhaB02 B:16-53,B:223-445  [code=3.40.367.20, no name defined]                                                                                                                                                                 1qhaB01           -----------------1qhaB04 B:481-512,B:671-892     1qhaB03 B:513-670,B:894-912  [code=3.30.420.40, no name defined]                                                                                              1qhaB04 B:481-512,B:671-892  [code=3.40.367.20, no name defined]                                                                                                                                                              -1qhaB03            -- CATH domains
           Pfam domains (1) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Hexokinase_1-1qhaB01 B:464-669                                                                                                                                                                                -Hexokinase_2-1qhaB05 B:671-910                                                                                                                                                                                                                  ---- Pfam domains (1)
           Pfam domains (2) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Hexokinase_1-1qhaB02 B:464-669                                                                                                                                                                                -Hexokinase_2-1qhaB06 B:671-910                                                                                                                                                                                                                  ---- Pfam domains (2)
           Pfam domains (3) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Hexokinase_1-1qhaB03 B:464-669                                                                                                                                                                                -Hexokinase_2-1qhaB07 B:671-910                                                                                                                                                                                                                  ---- Pfam domains (3)
           Pfam domains (4) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Hexokinase_1-1qhaB04 B:464-669                                                                                                                                                                                -Hexokinase_2-1qhaB08 B:671-910                                                                                                                                                                                                                  ---- Pfam domains (4)
         Sec.struct. author ..hhhhhhhh.hhh...hhhhhhhhhhhhhhhhhhh..........................eeeeeeee....eeeeeeee........eeeeeee...hhhh...hhhhhhhhhhhhhhhhhh........eeeeee..............................hhhhhhhhhhh......eeeeee.hhhhhhhhhhhh...eeeeeee...eeeeeeeehhh.........eeeee..hhh............hhhhhhhhh.........hhh..hhhhhhhhhhhhhhhhh....hhh.............hhhhhhhh....hhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....eeeeeeee.hhhhh...hhhhhhhhhhhh...eeeeeee.....hhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhh..........................eeeeeeee....eeeeeeeee.....eeeeeeeee...hhhh...hhhhhhhhhhhhhhhhhh........eeeeee..............................hhhhhhhhhhhh.....eeeeee.hhhhhhhhhh.....eeeeeee...eeeeeeeehhh.........eeeee..hhh............hhhhhhhh........hhhhh..hhhhhhhhhhhhhhhhh....hhh...hhhh......hhhhhhh......hhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....eeeeeeee.hhhhh...hhhhhhhhhhhh...eeeeeee.....hhhhhhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------S------------------------------------------------------------------------------------------------------------------------------------------------------S-----------------------------------------------------------------------------------------------M------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                PROSITE (1) HEXOKINASE_2  PDB: B:16-458 UniProt: 16-458                                                                                                                                                                                                                                                                                                                                                                                                                -----HEXOKINASE_2  PDB: B:464-906 UniProt: 464-906                                                                                                                                                                                                                                                                                                                                                                                                              -------- PROSITE (1)
                PROSITE (2) --------------------------------------------------------------------------------------------------------------------------------------HEXOKINASE_1              --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HEXOKINASE_1              --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
           Transcript 1 (1) 1.11  Exon 1.15c  PDB: B:22-76 UniProt: 22-76                -------------------------------------------------Exon 1.17c  PDB: B:126-165              Exon 1.18  PDB: B:166-197       Exon 1.19  PDB: B:198-231         ------------------------------------------------------------Exon 1.21b  PDB: B:292-344 UniProt: 292-344          -----------------------------------------------------------------------------Exon 1.23  PDB: B:422-524 UniProt: 422-524                                                             -------------------------------------------------Exon 1.24c  PDB: B:574-613              Exon 1.25a  PDB: B:614-645      Exon 1.26  PDB: B:646-679         ------------------------------------------------------------Exon 1.28  PDB: B:740-792 UniProt: 740-792           -----------------------------------------------------------------------------Exon 1.30c  PDB: B:870-914 UniProt: 870-917   Transcript 1 (1)
           Transcript 1 (2) ------------------------------------------------------------Exon 1.16b  PDB: B:76-125 UniProt: 76-125         ---------------------------------------------------------------------------------------------------------Exon 1.20b  PDB: B:231-292 UniProt: 231-292                   ---------------------------------------------------Exon 1.22  PDB: B:344-422 UniProt: 344-422                                     -----------------------------------------------------------------------------------------------------Exon 1.24a  PDB: B:524-573 UniProt: 524-573       ---------------------------------------------------------------------------------------------------------Exon 1.27b  PDB: B:679-740 UniProt: 679-740                   ---------------------------------------------------Exon 1.29  PDB: B:792-870 UniProt: 792-870                                     -------------------------------------------- Transcript 1 (2)
                 1qha B  16 DDQVKKIDKYLYAMRLSDETLIDIMTRFRKEMKNGLSRDFNPTATVKMLPTFVRSIPDGSEKGDFIALDLGGSSFRILRVQVNHEKNQNVHMESEVYDTPENIVHGSGSQLFDHVAECLGDFMEKRKIKDKKLPVGFTFSFPCQQSKIDEAILITWTKRFKASGVEGADVVKLLNKAIKKRGDYDANIVAVVNDTVGTMMTCGYDDQHCEVGLIIGTGTNACYMEELRHIDLVEGDEGRMCINTEWGAFGDDGSLEDIRTEFDREIDRGSLNPGKQLFEKMVSGMYLGELVRLILVKMAKEGLLFEGRITPELLTRGKFNTSDVSAIEKNKEGLHNAKEILTRLGVEPSDDDCVSVQHVCTIVSFRSANLVAATLGAILNRLRDNKGTPRLRTTVGVDGSLYKTHPQYSRRFHKTLRRLVPDSDVRFLLSESGSGKGAAMVTAVAYRLAEQHRQIEETLAHFHLTKDMLLEVKKRMRAEMELGLRKQTHNNAVVKMLPSFVRRTPDGTENGDFLALDLGGTNFRVLLVKIRSGKKRTVEMHNKIYAIPIEIMQGTGEELFDHIVSCISDFLDYMGIKGPRMPLGFTFSFPCQQTSLDAGILITWTKGFKATDCVGHDVVTLLRDAIKRREEFDLDVVAVVNDTVGTMMTCAYEEPTCEVGLIVGTGSNACYMEEMKNVEMVEGDQGQMCINMEWGAFGDNGCLDDIRTHYDRLVNEYSLNAGKQRYEKMISGMYLGEIVRNILIDFTKKGFLFRGQISETLKTRGIFETKFLSQIESDRLALLQVRAILQQLGLNSTCDDSILVKTVCGVVSRRAAQLCGAGMAAVVDKIRENRGLDRLNVTVGVDGTLYKLHPHFSRIMHQTVKELSPKCNVSFLLSEDGSGKGAALITAVGVRLRTE 914
                                    25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415       425       435       445       455       465       475       485       495       505       515       525       535       545       555       565       575       585       595       605       615       625       635       645       655       665       675       685       695       705       715       725       735       745       755       765       775       785       795       805       815       825       835       845       855       865       875       885       895       905

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric/Biological Unit

Classes(

)

Folds(

)

Superfamilies( (-)

)

Families(

)

Protein Domains( (-)

)

Organisms( (-)

)

Class: Alpha and beta proteins (a/b) (23833)

Fold: Ribonuclease H-like motif (1424)

Superfamily: Actin-like ATPase domain (426)

Family: Hexokinase (19)

Protein domain: Mammalian type I hexokinase (11)

Human (Homo sapiens) [TaxId: 9606] (10)

1a	d1qhaa1	A:12-222
1b	d1qhab3	B:466-670
1c	d1qhab4	B:671-914
1d	d1qhaa2	A:223-465
1e	d1qhaa3	A:466-670
1f	d1qhaa4	A:671-914
1g	d1qhab1	B:16-222
1h	d1qhab2	B:223-465

Asymmetric/Biological Unit

Classes(

)

Architectures( (-)

)

Topologies( (-)

)

Homologous Superfamilies( (-)

)

Organisms( (-)

)

Class: Alpha Beta (26913)

Architecture: 2-Layer Sandwich (8480)

Topology: Nucleotidyltransferase; domain 5 (788)

Homologous Superfamily: [code=3.30.420.40, no name defined] (217)

Human (Homo sapiens) (36)

1a	1qhaB03	B:513-670,B:894-912
1b	1qhaA03	A:513-670,A:894-914
1c	1qhaA01	A:54-222,A:446-463
1d	1qhaB01	B:54-222,B:446-463

Architecture: 3-Layer(aba) Sandwich (12045)

Topology: Hexokinase; domain 1 (22)

Homologous Superfamily: [code=3.40.367.20, no name defined] (22)

Human (Homo sapiens) (16)

2a	1qhaA02	A:16-53,A:223-445
2b	1qhaB02	B:16-53,B:223-445
2c	1qhaA04	A:481-512,A:671-892
2d	1qhaB04	B:481-512,B:671-892

Asymmetric/Biological Unit

Clans(

)

Families(

)

Organisms( (-)

)

Clan: Actin_ATPase (173)

Family: Hexokinase_1 (12)

Homo sapiens (Human) (4)

1a	Hexokinase_1-1qhaB01	B:464-669
1b	Hexokinase_1-1qhaB02	B:464-669
1c	Hexokinase_1-1qhaB03	B:464-669
1d	Hexokinase_1-1qhaB04	B:464-669

Family: Hexokinase_2 (12)

Homo sapiens (Human) (4)

2a	Hexokinase_2-1qhaB05	B:671-910
2b	Hexokinase_2-1qhaB06	B:671-910
2c	Hexokinase_2-1qhaB07	B:671-910
2d	Hexokinase_2-1qhaB08	B:671-910

Asymmetric/Biological Unit(hide GO term definitions)

Chain A,B (HXK1_HUMAN | P19367)

molecular function
	GO:0005524	ATP binding	Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
	GO:0003824	catalytic activity	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
	GO:0008865	fructokinase activity	Catalysis of the reaction: ATP + D-fructose = ADP + D-fructose 6-phosphate.
	GO:0004340	glucokinase activity	Catalysis of the reaction: ATP + D-glucose = ADP + D-glucose-6-phosphate.
	GO:0005536	glucose binding	Interacting selectively and non-covalently with the D- or L-enantiomer of glucose.
	GO:0004396	hexokinase activity	Catalysis of the reaction: ATP + D-hexose = ADP + D-hexose 6-phosphate.
	GO:0016301	kinase activity	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule.
	GO:0019158	mannokinase activity	Catalysis of the reaction: ATP + D-mannose = ADP + D-mannose 6-phosphate.
	GO:0000166	nucleotide binding	Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
	GO:0016773	phosphotransferase activity, alcohol group as acceptor	Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to an alcohol group (acceptor).
	GO:0005515	protein binding	Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
	GO:0016740	transferase activity	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.
biological process
	GO:0061621	canonical glycolysis	The glycolytic process that begins with the conversion of glucose to glucose-6-phosphate by glucokinase activity. Glycolytic processes are the chemical reactions and pathways resulting in the breakdown of a carbohydrate into pyruvate, with the concomitant production of a small amount of ATP.
	GO:0005975	carbohydrate metabolic process	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
	GO:0046835	carbohydrate phosphorylation	The process of introducing a phosphate group into a carbohydrate, any organic compound based on the general formula Cx(H2O)y.
	GO:0001678	cellular glucose homeostasis	A cellular homeostatic process involved in the maintenance of an internal steady state of glucose within a cell or between a cell and its external environment.
	GO:0072655	establishment of protein localization to mitochondrion	The directed movement of a protein to the mitochondrion or a part of the mitochondrion.
	GO:0051156	glucose 6-phosphate metabolic process	The chemical reactions and pathways involving glucose 6-phosphate, a monophosphorylated derivative of glucose with the phosphate group attached to C-6.
	GO:0015758	glucose transport	The directed movement of the hexose monosaccharide glucose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
	GO:0006096	glycolytic process	The chemical reactions and pathways resulting in the breakdown of a carbohydrate into pyruvate, with the concomitant production of a small amount of ATP and the reduction of NAD(P) to NAD(P)H. Glycolysis begins with the metabolism of a carbohydrate to generate products that can enter the pathway and ends with the production of pyruvate. Pyruvate may be converted to acetyl-coenzyme A, ethanol, lactate, or other small molecules.
	GO:0019318	hexose metabolic process	The chemical reactions and pathways involving a hexose, any monosaccharide with a chain of six carbon atoms in the molecule.
	GO:0072656	maintenance of protein location in mitochondrion	Any process in which a protein is maintained in a specific location in a mitochondrion, and is prevented from moving elsewhere.
	GO:0008152	metabolic process	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
	GO:0016310	phosphorylation	The process of introducing a phosphate group into a molecule, usually with the formation of a phosphoric ester, a phosphoric anhydride or a phosphoric amide.
cellular component
	GO:0005929	cilium	A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface and of some cytoplasmic parts. Each cilium is largely bounded by an extrusion of the cytoplasmic (plasma) membrane, and contains a regular longitudinal array of microtubules, anchored to a basal body.
	GO:0005829	cytosol	The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
	GO:0016020	membrane	A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
	GO:0045121	membrane raft	Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions.
	GO:0005741	mitochondrial outer membrane	The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope.
	GO:0005739	mitochondrion	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.
	GO:0097228	sperm principal piece	The segment of the sperm flagellum where the mitochondrial sheath ends, and the outer dense fibers (ODFs) associated with outer axonemal doublets 3 and 8 are replaced by the 2 longitudinal columns of the fibrous sheath (FS) which run the length of the principal piece and are stabilized by circumferential ribs. The principal piece makes up ~2/3 of the length of the sperm flagellum and is defined by the presence of the FS and of only 7 (rather than 9) ODFs which taper and then terminate near the distal end of the principal piece.

Asymmetric/Biological Unit
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	Cis Peptide Bonds
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	1qha
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	HXK1_HUMAN \| P19367
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	2.7.1.1
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	HXK1_HUMAN \| P19367	:	1cza 1dgk 1hkb 1hkc 4f9o 4foe 4foi 4fpa 4fpb

(no "Related Entries Specified in the PDB File" available for 1QHA)

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (4, 16)

Sites (16, 16)

SS Bonds (0, 0)

Cis Peptide Bonds (0, 0)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (3, 6)

PROSITE Motifs (2, 8)

Exons (18, 36)

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SCOP Domains (1, 8)

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Pfam Domains (2, 8)

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