Chain A from PDB Type:PROTEIN Length:123
aligned with CAPSD_BPQBE | P03615 from UniProtKB/Swiss-Prot Length:133
Alignment length:132
11 21 31 41 51 61 71 81 91 101 111 121 131
CAPSD_BPQBE 2 AKLETVTLGNIGKDGKQTLVLNPRGVNPTNGVASLSQAGAVPALEKRVTVSVSQPSRNRKNYKVQVKIQNPTACTANGSCDPSVTRQAYADVTFSFTQYSTDEERAFVRTELAALLASPLLIDAIDQLNPAY 133
SCOP domains d1qbea_ A: Qbeta coat protein SCOP domains
CATH domains 1qbeA00 A:1-132 MS2 Viral Coat Protein CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author .....eeeeee.....eeeeeeeeeee....eeeeee....hhh..eeeeeee..-----.eeeeeeeeeeeee.----...eeeeeeeeeeeeee.....hhhhhhhhhhhhhhhh.hhhhhhh....... Sec.struct. author
SAPs(SNPs) --------------------------------S-----------------------------------------A--------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------ Transcript
1qbe A 1 AKLETVTLGNIGKDGKQTLVLNPRGVNPTNGVASLSQAGAVPALEKRVTVSVSQP-----NYKVQVKIQNPTACT----CDPSVTRQAYADVTFSFTQYSTDEERAFVRTELAALLASPLLIDAIDQLNPAY 132
10 20 30 40 50 | -| 70 | 80 90 100 110 120 130
55 61 75 80
Chain B from PDB Type:PROTEIN Length:132
aligned with CAPSD_BPQBE | P03615 from UniProtKB/Swiss-Prot Length:133
Alignment length:132
11 21 31 41 51 61 71 81 91 101 111 121 131
CAPSD_BPQBE 2 AKLETVTLGNIGKDGKQTLVLNPRGVNPTNGVASLSQAGAVPALEKRVTVSVSQPSRNRKNYKVQVKIQNPTACTANGSCDPSVTRQAYADVTFSFTQYSTDEERAFVRTELAALLASPLLIDAIDQLNPAY 133
SCOP domains d1qbeb_ B: Qbeta coat protein SCOP domains
CATH domains 1qbeB00 B:1-132 MS2 Viral Coat Protein CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author .....eeeeee......eeeeeeeeee....eeeeee....hhh..eeeeeee........eeeeeeeeeeeee........eeeeeeeeeeeeee.....hhhhhhhhhhhhhhhh.hhhhhhhh...... Sec.struct. author
SAPs(SNPs) --------------------------------S-----------------------------------------A--------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------ Transcript
1qbe B 1 AKLETVTLGNIGKDGKQTLVLNPRGVNPTNGVASLSQAGAVPALEKRVTVSVSQPSRNRKNYKVQVKIQNPTACTANGSCDPSVTRQAYADVTFSFTQYSTDEERAFVRTELAALLASPLLIDAIDQLNPAY 132
10 20 30 40 50 60 70 80 90 100 110 120 130
Chain C from PDB Type:PROTEIN Length:123
aligned with CAPSD_BPQBE | P03615 from UniProtKB/Swiss-Prot Length:133
Alignment length:132
11 21 31 41 51 61 71 81 91 101 111 121 131
CAPSD_BPQBE 2 AKLETVTLGNIGKDGKQTLVLNPRGVNPTNGVASLSQAGAVPALEKRVTVSVSQPSRNRKNYKVQVKIQNPTACTANGSCDPSVTRQAYADVTFSFTQYSTDEERAFVRTELAALLASPLLIDAIDQLNPAY 133
SCOP domains d1qbec_ C: Qbeta coat protein SCOP domains
CATH domains 1qbeC00 C:1-132 MS2 Viral Coat Protein CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author .....eeeeee.....eeeeeeeeeee....eeeeee....hhh..eeeeeee..-----.eeeeeeeeeeeee.----...eeeeeeeeeeeeee.....hhhhhhhhhhhhhhhh.hhhhhhhh...... Sec.struct. author
SAPs(SNPs) --------------------------------S-----------------------------------------A--------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------ Transcript
1qbe C 1 AKLETVTLGNIGKDGKQTLVLNPRGVNPTNGVASLSQAGAVPALEKRVTVSVSQP-----NYKVQVKIQNPTACT----CDPSVTRQAYADVTFSFTQYSTDEERAFVRTELAALLASPLLIDAIDQLNPAY 132
10 20 30 40 50 | -| 70 | 80 90 100 110 120 130
55 61 75 80
Legend: |
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→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |