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(-) Description

Title :  MTH1859
 
Authors :  H. Ye, C. Steegborn, H. Wu, Northeast Structural Genomics Consortium (Nesg)
Date :  09 Jun 03  (Deposition) - 12 Aug 03  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  3.15
Chains :  Asym./Biol. Unit :  A,B
Keywords :  Unknown Function, Structural Genomics, Psi, Protein Structure Initiative, Northeast Structural Genomics Consortium, Nesg (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  H. Ye, T. C. Chen, X. Xu, M. Pennycooke, H. Wu, C. Steegborn
Crystal Structure Of The Putative Adapter Protein Mth1859.
J. Struct. Biol. V. 148 251 2004
PubMed-ID: 15477104  |  Reference-DOI: 10.1016/J.JSB.2004.06.004
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - MTH1895
    Chains: A, B
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Organism Scientific: METHANOTHERMOBACTER THERMAUTOTROPHICUS
    Organism Taxid: 145262

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit : AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 1PM3)

(-) Sites  (0, 0)

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(-) SS Bonds  (0, 0)

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(-) Cis Peptide Bonds  (0, 0)

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 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

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(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:69
 aligned with O27887_METTH | O27887 from UniProtKB/TrEMBL  Length:77

    Alignment length:78
                             1                                                                            
                             |       9        19        29        39        49        59        69        
          O27887_METTH    - -MRIVEEMVGKEVLDSSAKVIGKVKDVEVDIESQAIESLVLGKGGISEGLGLSKGETIVPYEMVKKIGDKILLKGPEE 77
               SCOP domains d1pm3a_ A: MTH1895                                                             SCOP domains
               CATH domains 1pm3A00 A:0-77 PRC-barrel domain                                               CATH domains
               Pfam domains ------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .ee........eee.....eeeeeeeeeee....eeeeeeee...---------.eeeee...eeee...eee..... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------ Transcript
                  1pm3 A  0 HMRIVEEMVGKEVLDSSAKVIGKVKDVEVDIESQAIESLVLGKGG---------GETIVPYEMVKKIGDKILLKGPEE 77
                                     9        19        29        39    |    -    |   59        69        
                                                                       44        54                       


Chain B from PDB  Type:PROTEIN  Length:68
 aligned with O27887_METTH | O27887 from UniProtKB/TrEMBL  Length:77

    Alignment length:77
                             1                                                                           
                             |       9        19        29        39        49        59        69       
          O27887_METTH    - -MRIVEEMVGKEVLDSSAKVIGKVKDVEVDIESQAIESLVLGKGGISEGLGLSKGETIVPYEMVKKIGDKILLKGPE 76
               SCOP domains d1pm3b_ B: MTH1895                                                            SCOP domains
               CATH domains 1pm3B00 B:0-76 PRC-barrel domain                                              CATH domains
           Pfam domains (1) -PRC-1pm3B01 B:1-76                                                           Pfam domains (1)
           Pfam domains (2) -PRC-1pm3B02 B:1-76                                                           Pfam domains (2)
         Sec.struct. author .ee........eee.....eeeeeeeeeee....eeeeeeee..---------...eeee.....ee...ee..... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------- Transcript
                  1pm3 B  0 HMRIVEEMVGKEVLDSSAKVIGKVKDVEVDIESQAIESLVLGKG---------KGETIVPYEMVKKIGDKILLKGPE 76
                                     9        19        29        39   |     -   |    59        69       
                                                                      43        53
   Legend:   → Mismatch (orange background)
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 2)

Asymmetric/Biological Unit
(-)
Class: All beta proteins (24004)

(-) CATH Domains  (1, 2)

Asymmetric/Biological Unit
(-)
Class: Mainly Beta (13760)

(-) Pfam Domains  (1, 2)

Asymmetric/Biological Unit
(-)
Clan: PRC-barrel (43)

(-) Gene Ontology  (0, 0)

Asymmetric/Biological Unit(hide GO term definitions)
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 Related Entries

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