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(-) Description

Title :  REACTIVE SITES OF AN ANTICARCINOGENIC BOWMAN-BIRK PROTEINASE INHIBITOR ARE SIMILAR TO OTHER TRYPSIN INHIBITORS
 
Authors :  P. Chen, J. Rose, B. C. Wang
Date :  26 Mar 91  (Deposition) - 15 Apr 92  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.50
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (6x)
Keywords :  Serine Proteinase Inhibitor (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  P. Chen, J. Rose, R. Love, C. H. Wei, B. C. Wang
Reactive Sites Of An Anticarcinogenic Bowman-Birk Proteinase Inhibitor Are Similar To Other Trypsin Inhibitors.
J. Biol. Chem. V. 267 1990 1992
PubMed-ID: 1730730
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - BOWMAN-BIRK INHIBITOR (PI-II)
    ChainsA
    EngineeredYES
    Organism CommonSOYBEAN
    Organism ScientificGLYCINE MAX
    Organism Taxid3847

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit A
Biological Unit 1 (6x)A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 1PI2)

(-) Sites  (0, 0)

(no "Site" information available for 1PI2)

(-) SS Bonds  (7, 7)

Asymmetric Unit
No.Residues
1A:7 -A:60
2A:8 -A:23
3A:11 -A:56
4A:13 -A:21
5A:30 -A:37
6A:34 -A:49
7A:39 -A:47

(-) Cis Peptide Bonds  (2, 2)

Asymmetric Unit
No.Residues
1Met A:17 -Pro A:18
2Gln A:43 -Pro A:44

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

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(-) PROSITE Motifs  (1, 1)

Asymmetric Unit (1, 1)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1BOWMAN_BIRKPS00281 Bowman-Birk serine protease inhibitors family signature.IBBD2_SOYBN40-55  1A:23-37
Biological Unit 1 (1, 6)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1BOWMAN_BIRKPS00281 Bowman-Birk serine protease inhibitors family signature.IBBD2_SOYBN40-55  6A:23-37

(-) Exons   (0, 0)

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(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:PROTEIN  Length:61
 aligned with IBBD2_SOYBN | P01064 from UniProtKB/Swiss-Prot  Length:83

    Alignment length:62
                                    29        39        49        59        69        79  
           IBBD2_SOYBN   20 YSKPCCDLCMCTRSMPPQCSCEDIRLNSCHSDCKSCMCTRSQPGQCRCLDTNDFCYKPCKSR 81
               SCOP domains d1pi2a_ A: Bowman-Birk  inhibitor, BBI                         SCOP domains
               CATH domains 1pi2A00 A:3-63                                                 CATH domains
           Pfam domains (1) --------------------------------Bowman-Birk_leg-1pi2A01 ------ Pfam domains (1)
           Pfam domains (2) --------------------------------Bowman-Birk_leg-1pi2A02 ------ Pfam domains (2)
         Sec.struct. author ........eeeee....eeeeee-ee........eeeee.....eeeeeeee.......... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------BOWMAN_BIRK     -------------------------- PROSITE
                 Transcript -------------------------------------------------------------- Transcript
                  1pi2 A  3 YSKPCCDLCMCTRSMPPQCSCED-RINSCHSDCKSCMCTRSQPGQCRCLDTNDFCYKPCKSR 63
                                    12        22  | |   31        41        51        61  
                                                 25 |                                     
                                                   26                                     

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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 1)

Asymmetric Unit

(-) CATH Domains  (1, 1)

Asymmetric Unit
(-)
Class: Mainly Beta (13760)

(-) Pfam Domains  (1, 2)

Asymmetric Unit

(-) Gene Ontology  (5, 5)

Asymmetric Unit(hide GO term definitions)
Chain A   (IBBD2_SOYBN | P01064)
molecular function
    GO:0030414    peptidase inhibitor activity    Stops, prevents or reduces the activity of a peptidase, any enzyme that catalyzes the hydrolysis peptide bonds.
    GO:0004867    serine-type endopeptidase inhibitor activity    Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme.
biological process
    GO:0010951    negative regulation of endopeptidase activity    Any process that decreases the frequency, rate or extent of endopeptidase activity, the endohydrolysis of peptide bonds within proteins.
    GO:0010466    negative regulation of peptidase activity    Any process that stops or reduces the rate of peptidase activity, the hydrolysis of peptide bonds within proteins.
cellular component
    GO:0005576    extracellular region    The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.

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