Chain A from PDB Type:PROTEIN Length:449
aligned with TEBA_STENO | P29549 from UniProtKB/Swiss-Prot Length:495
Alignment length:458
44 54 64 74 84 94 104 114 124 134 144 154 164 174 184 194 204 214 224 234 244 254 264 274 284 294 304 314 324 334 344 354 364 374 384 394 404 414 424 434 444 454 464 474 484
TEBA_STENO 35 KYEYVELAKASLTSAQPQHFYAVVIDATFPYKTNQERYICSLKIVDPTLYLKQQKGAGDASDYATLVLYAKRFEDLPIIHRAGDIIRVHRATLRLYNGQRQFNANVFYSSSWALFSTDKRSVTQEINNQDAVSDTTPFSFSSKHATIEKNEISILQNLRKWANQYFSSYSVISSDMYTALNKAQAQKGDFDVVAKILQVHELDEYTNELKLKDASGQVFYTLSLKLKFPHVRTGEVVRIRSATYDETSTQKKVLILSHYSNIITFIQSSKLAKELRAKIQDDHSVEVASLKKNVSLNAVVLTEVDKKHAALPSTSLQDLFHHADSDKELQAQDTFRTQFYVTKIEPSDVKEWVKGYDRKTKKSSSLKGASGKGDNIFQVQFLVKDASTQLNNNTYRVLLYTQDGLGANFFNVKADNLHKNADARKKLEDSAELLTKFNSYVDAVVERRNGFYLIKDTK 492
SCOP domains d1phja1 A:35-204 Telomere end binding protein alpha s ubunit d1phja2 A:205-328 Telomere end binding protein alpha subunit d1phja3 A:329-492 Telomere end binding protein alpha subunit SCOP domains
CATH domains --1phjA01 A:37-210 Nucleic acid-binding proteins 1phjA02 A:211-326 Nucleic acid-binding proteins 1phjA03 A:327-492 Nucleic acid-binding proteins CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .................eeeeeeeeee...ee.....eeeeeeee........-----.....eeeeeee.hhhhh....ee..eeeeeeeeeeee..eeeeeee.....eeeee.....hhhhhhhh..........ee.........hhhhhhhhhhhhhhhhhhhh...hhhhh.hhhhhhhh...eeeeeeeeeeee....eeeeeee.....eeeeeee...........eeeeeeeee........eeeeeeeeeeeee...hhhhhhhhhhh...hhhhhhhhhh......ee..ee.hhhh.....hhhhhhhh...hhhhhh..eeeeeeeeeeee..hhhh.eeeee....eee...----..eeeeeeeeeeehhhhh...eeeeeeee...................hhhhhhhhhhhhhhhh...eeeeeeeeee..eeeee.ee Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------S------------------------------------------------------------------------------------------------------------------------------------------------E------------------------------------ SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1phj A 35 KYEYVELAKASLTSAQPQHFYAVVIDATFPYKTNQERYICSLKIVDPTLYLKQ-----DASDYATLVLYAKRFEDLPIIHRAGDIIRVHRATLRLYNGQRQFNANVFYSSSWALFSTDKRSVTQEINNQDAVSDTTPFSFSSKHATIEKNEISILQNLRKWANQYFSSYSVISSDMYTALNKAQAQKGDFDVVAKILQVHELDEYTNELKLKDASGQVFYTLSLKLKFPHVRTGEVVRIRSATYDETSTQKKVLILSHYSNIITFIQSSKLAKELRAKIQDDHSVEVASLKKNVSLNAVVLTEVDKKHAALPSTSLQDLFHHADSDKELQAQDTFRTQFYVTKIEPSDVKEWVKGYDRKTKKSSSLK----KGDNIFQVQFLVKDASTQLNNNTYRVLLYTQDGLGANFFNVKADNLHKNADARKKLEDSAELLTKFNSYVDAVVERRNGFYLIKDTK 492
44 54 64 74 84 | 94 104 114 124 134 144 154 164 174 184 194 204 214 224 234 244 254 264 274 284 294 304 314 324 334 344 354 364 374 384 394 | - | 414 424 434 444 454 464 474 484
87 93 401 406
Chain B from PDB Type:PROTEIN Length:215
aligned with TEBB_STENO | P16458 from UniProtKB/Swiss-Prot Length:385
Alignment length:215
19 29 39 49 59 69 79 89 99 109 119 129 139 149 159 169 179 189 199 209 219
TEBB_STENO 10 QQSAFKQLYTELFNNEGDFSKVSSNLKKPLKCYVKESYPHFLVTDGYFFVAPYFTKEAVNEFHAKFPNVNIVDLTDKVIVINNWSLELRRVNSAEVFTSYANLEARLIVHSFKPNLQERLNPTRYPVNLFRDDEFKTTIQHFRHTALQAAINKTVKGDNLVDISKVADAAGKKGKVDAGIVKASASKGDEFSDFSFKEGNTATLKIADIFVQEKG 224
SCOP domains d1phjb_ B: Core domain of telomere end binding protein beta subunit SCOP domains
CATH domains 1phjB00 B:10-224 Telomere-binding Protein Beta Subunit; Chain CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..hhhhhhhhhhhh........hhhhh..eeeeeee.....eee...eee.eeehhhhhhhhhhhh...hhhhh...eeeeeeeeeeeee............eeeeeeeeeeeee...........ee...hhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhh......hhhh.eee........................hhhhhhhhh Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------S------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1phj B 10 QQSAFKQLYTELFNNEGDFSKVSSNLKKPLKCYVKESYPHFLVTDGYFFVAPYFTKEAVNEFHAKFPNVNIVDLTDKVIVINNWSLELRRVNSAEVFTSYANLEARLIVHSFKPNLQERLNPTRYPVNLFRDDEFKTTIQHFRHTALQAAINKTVKGDNLVDISKVADAAGKKGKVDAGIVKASASKGDEFSDFSFKEGNTATLKIADIFVQEKG 224
19 29 39 49 59 69 79 89 99 109 119 129 139 149 159 169 179 189 199 209 219
Chain D from PDB Type:DNA Length:12
1phj D 1 GGxGTTTTGGGG 12
| 10
3-3DR
Chain G from PDB Type:DNA Length:12
1phj G 1 GGGGTTTTGGGG 12
10
Chain H from PDB Type:DNA Length:12
1phj H 1 GGGGTTTTGGGG 12
10
Legend: |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |