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(-) Description

Title :  CBS DOMAIN PROTEIN
 
Authors :  M. E. Cuff, T. Skarina, A. Savchenko, A. Edwards, A. Joachimiak, Midwes For Structural Genomics (Mcsg)
Date :  14 May 03  (Deposition) - 16 Dec 03  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.40
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (1x)
Biol. Unit 2:  A  (2x)
Keywords :  Structural Genomics, Methanothermobacter Thermautotrophicus, Cbs Domain, Psi, Protein Structure Initiative, Midwest Center For Structural Genomics, Mcsg, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  M. E. Cuff, T. Skarina, A. Savchenko, A. Edwards, A. Joachimiak
Structure Of A Hypothetical Protein From M. Thermautotrophicus Reveals A Novel Fold And A Pseudo 2-Fold Axis Of Symmetry
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - HYPOTHETICAL PROTEIN
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Organism Scientific: METHANOTHERMOBACTER THERMAUTOTROPHICUS STR. DELTA H
    Organism Taxid: 187420
    Strain: DELTA H

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit : A
Biological Unit 1 (1x): A
Biological Unit 2 (2x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 5)

Asymmetric Unit (2, 5)
No.NameCountTypeFull Name
1MG1Ligand/IonMAGNESIUM ION
2MSE4Mod. Amino AcidSELENOMETHIONINE
Biological Unit 1 (1, 4)
No.NameCountTypeFull Name
1MG-1Ligand/IonMAGNESIUM ION
2MSE4Mod. Amino AcidSELENOMETHIONINE
Biological Unit 2 (1, 8)
No.NameCountTypeFull Name
1MG-1Ligand/IonMAGNESIUM ION
2MSE8Mod. Amino AcidSELENOMETHIONINE

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREGLU A:72 , HOH A:509 , HOH A:510 , HOH A:516 , HOH A:517 , HOH A:707BINDING SITE FOR RESIDUE MG A 502

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1PBJ)

(-) Cis Peptide Bonds  (0, 0)

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 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

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(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

Asymmetric Unit
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SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:PROTEIN  Length:120
 aligned with O27659_METTH | O27659 from UniProtKB/TrEMBL  Length:125

    Alignment length:120
                                    11        21        31        41        51        61        71        81        91       101       111       121
         O27659_METTH     2 RVEDVMVTDVDTIDITASLEDVLRNYVENAKGSSVVVKEGVRVGIVTTWDVLEAIAEGDDLAEVKVWEVMERDLVTISPRATIKEAAEKMVKNVVWRLLVEEDDEIIGVISATDILRAKM 121
               SCOP domains d1pbja3 A:2-121 Hypothetical protein MTH1622                                                                             SCOP domains
               CATH domains 1pbjA00 A:2-120 CBS-domain                                                                                             - CATH domains
           Pfam domains (1) -----------------------------------------------------------------CBS-1pbjA01 A:67-121                                    Pfam domains (1)
           Pfam domains (2) -----------------------------------------------------------------CBS-1pbjA02 A:67-121                                    Pfam domains (2)
         Sec.struct. author hhhhhh.....eee...hhhhhhhhhhhhh..eeeeee..eeeeeeehhhhhhhhhhh......hhhhhh.hhh.ee....hhhhhhhhhhhhh..eeeeee..eeeeeeehhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------ Transcript
                 1pbj A   2 RVEDVmVTDVDTIDITASLEDVLRNYVENAKGSSVVVKEGVRVGIVTTWDVLEAIAEGDDLAEVKVWEVmERDLVTISPRATIKEAAEKmVKNVVWRLLVEEDDEIIGVISATDILRAKm 121
                                 |  11        21        31        41        51        61        71        81        91       101       111       121
                                 7-MSE                                                          71-MSE              91-MSE                       121-MSE
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 1)

Asymmetric Unit
(-)
Class: Alpha and beta proteins (a+b) (23004)

(-) CATH Domains  (1, 1)

Asymmetric Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (1, 2)

Asymmetric Unit
(-)
Clan: no clan defined [family: CBS] (51)

(-) Gene Ontology  (0, 0)

Asymmetric Unit(hide GO term definitions)
    (no "Gene Ontology" information available for 1PBJ)

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  1pbj
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  O27659_METTH | O27659
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