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(-) Description

Title :  SOLUTION NMR STRUCTURE OF HYPOTHETICAL PROTEIN TA1414 OF THERMOPLASMA ACIDOPHILUM
 
Authors :  D. Monleon, A. Yee, C. S. Liu, C. Arrowsmith, B. Celda
Date :  14 May 03  (Deposition) - 27 May 03  (Release) - 21 Apr 09  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (10x)
Keywords :  Structural Genomics, Thermoplasma Acidophilum, Nmr Structure, Fast Nmr, Semiautomated Analysis (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  D. Monleon, A. Yee, C. S. Liu, C. Arrowsmith, B. Celda
Solution Structure Of Hypothetical Protein Ta1414 From Thermoplasma Acidophilum.
J. Biomol. Nmr V. 28 81 2004
PubMed-ID: 14739641  |  Reference-DOI: 10.1023/B:JNMR.0000012862.33577.74
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - HYPOTHETICAL PROTEIN TA1170/TA1414
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET15B
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: TA1170 AND TA1414
    Organism Scientific: THERMOPLASMA ACIDOPHILUM
    Organism Taxid: 2303

 Structural Features

(-) Chains, Units

  
NMR Structure (10x): 

Summary Information (see also Sequences/Alignments below)

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(-) SS Bonds  (0, 0)

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(-) Cis Peptide Bonds  (1, 10)

NMR Structure
No.ModelResidues
11, 2, 3, 4, 5, 6, 7, 8, 9, 10Cys A:16 -Pro A:17

 Sequence-Structure Mapping

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(-) PROSITE Motifs  (1, 1)

NMR Structure (1, 1)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1UPF0033PS01148 Uncharacterized protein family UPF0033 signature.Y1170_THEAC9-33  1A:9-33

(-) Exons   (0, 0)

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(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:78
 aligned with Y1170_THEAC | Q9HI35 from UniProtKB/Swiss-Prot  Length:78

    Alignment length:78
                                    10        20        30        40        50        60        70        
           Y1170_THEAC    1 MDVKPDRVIDARGSYCPGPLMELIKAYKQAKVGEVISVYSTDAGTKKDAPAWIQKSGQELVGVFDRNGYYEIVMKKVK 78
               SCOP domains d1pava_ A: Hypothetical protein Ta1170/Ta1414                                  SCOP domains
               CATH domains 1pavA00 A:1-78 SirA-like                                                       CATH domains
               Pfam domains ------SirA-1pavA01 A:7-76                                                   -- Pfam domains
         Sec.struct. author ..................hhhhhhhhhh.......ee......hhhhhhhhhhhhhheee............eeee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE --------UPF0033  PDB: A:9-33     --------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------ Transcript
                  1pav A  1 MDVKPDRVIDARGSYCPGPLMELIKAYKQAKVGEVISVYSTDAGTKKDAPAWIQKSGQELVGVFDRNGYYEIVMKKVK 78
                                    10        20        30        40        50        60        70
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 1)

NMR Structure
(-)
Class: Alpha and beta proteins (a+b) (23004)

(-) CATH Domains  (1, 1)

NMR Structure
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (1, 1)

NMR Structure
(-)
Clan: SirA-like (4)

(-) Gene Ontology  (0, 0)

NMR Structure(hide GO term definitions)
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    Cys A:16 - Pro A:17   [ RasMol ]  
 

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5797 HYPOTHETICAL PROTEIN TA1414 FROM THERMOPLASMA ACIDOPHILUM