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(-) Description

Title :  CRYSTAL STRUCTURE OF BLOOD COAGULATION FACTOR XA IN COMPLEX WITH ECOTIN M84R
 
Authors :  S. X. Wang, E. Hur, C. A. Sousa, L. Brinen, E. J. Slivka, R. J. Fletterick
Date :  10 Apr 03  (Deposition) - 26 Aug 03  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.80
Chains :  Asym. Unit :  E,H,L
Biol. Unit 1:  E,H,L  (2x)
Keywords :  Factor Xa, Serine Protease, Ecotin M84R, Serine Protease Inhibitor, Hydrolase (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  S. X. Wang, E. Hur, C. A. Sousa, L. Brinen, E. J. Slivka, R. J. Fletterick
The Extended Interactions And Gla Domain Of Blood Coagulation Factor Xa
Biochemistry V. 42 7959 2003
PubMed-ID: 12834348  |  Reference-DOI: 10.1021/BI027320A

(-) Compounds

Molecule 1 - COAGULATION FACTOR X PRECURSOR
    ChainsL
    EC Number3.4.21.6
    FragmentFACTOR XA LIGHT CHAIN
    Organism CommonHUMAN
    Organism ScientificHOMO SAPIENS
    Organism Taxid9606
    SynonymSTUART FACTOR
 
Molecule 2 - COAGULATION FACTOR X PRECURSOR
    ChainsH
    EC Number3.4.21.6
    FragmentFACTOR XA HEAVY CHAIN
    Organism CommonHUMAN
    Organism ScientificHOMO SAPIENS
    Organism Taxid9606
    SynonymSTUART FACTOR
 
Molecule 3 - ECOTIN PRECURSOR
    ChainsE
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System Taxid562
    FragmentECOTIN
    GeneECO OR ETI OR B2209
    MutationYES
    Organism ScientificESCHERICHIA COLI
    Organism Taxid562

 Structural Features

(-) Chains, Units

  123
Asymmetric Unit EHL
Biological Unit 1 (2x)EHL

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 16)

Asymmetric Unit (3, 16)
No.NameCountTypeFull Name
1CGU11Mod. Amino AcidGAMMA-CARBOXY-GLUTAMIC ACID
2MG4Ligand/IonMAGNESIUM ION
3NA1Ligand/IonSODIUM ION
Biological Unit 1 (1, 22)
No.NameCountTypeFull Name
1CGU22Mod. Amino AcidGAMMA-CARBOXY-GLUTAMIC ACID
2MG-1Ligand/IonMAGNESIUM ION
3NA-1Ligand/IonSODIUM ION

(-) Sites  (5, 5)

Asymmetric Unit (5, 5)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREGLN E:5 , CGU L:16 , CGU L:26BINDING SITE FOR RESIDUE MG L 139
2AC2SOFTWARECGU L:14 , CGU L:19 , HOH L:148BINDING SITE FOR RESIDUE MG L 140
3AC3SOFTWARECGU L:25 , CGU L:29 , HOH L:144BINDING SITE FOR RESIDUE MG L 141
4AC4SOFTWAREASP H:70 , ASN H:72 , GLN H:75 , GLU H:76 , GLU H:80 , HOH H:273BINDING SITE FOR RESIDUE MG H 265
5AC5SOFTWARETYR H:185 , ASP H:185A , ARG H:222 , LYS H:224BINDING SITE FOR RESIDUE NA H 266

(-) SS Bonds  (10, 10)

Asymmetric Unit
No.Residues
1E:50 -E:87
2H:22 -H:27
3H:42 -H:58
4H:168 -H:182
5H:191 -H:220
6L:17 -L:22
7L:89 -L:100
8L:96 -L:109
9L:111 -L:124
10L:132 -H:122

(-) Cis Peptide Bonds  (1, 1)

Asymmetric Unit
No.Residues
1Ser E:79 -Pro E:80

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (28, 28)

Asymmetric Unit (28, 28)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
01UniProtVAR_065428E47GFA10_HUMANDisease (FA10D)121964943LE7G
02UniProtVAR_065429G51VFA10_HUMANDisease (FA10D)751782758LG11V
03UniProtVAR_065430E54GFA10_HUMANDisease (FA10D)121964944LE14G
04UniProtVAR_065431E54KFA10_HUMANDisease (FA10D)121964939LE14K
05UniProtVAR_065432E72QFA10_HUMANDisease (FA10D)121964945LE32Q
06UniProtVAR_075213G262DFA10_HUMANUnclassified (FA10D)  ---HG43D
07UniProtVAR_065437G289RFA10_HUMANDisease (FA10D)121964946HG69R
08UniProtVAR_065438E304KFA10_HUMANDisease (FA10D)747292771HE84K
09UniProtVAR_065434E142KFA10_HUMANUnclassified (FA10D)61753266LE102K
10UniProtVAR_065439D322NFA10_HUMANDisease (FA10D)121964942HD102N
11UniProtVAR_065440R327WFA10_HUMANDisease (FA10D)770119164HR107W
12UniProtVAR_065435C149YFA10_HUMANDisease (FA10D)  ---LC109Y
13UniProtVAR_065436C151YFA10_HUMANDisease (FA10D)  ---LC111Y
14UniProtVAR_020176A152TFA10_HUMANPolymorphism3211772LA112T
15UniProtVAR_065441V338MFA10_HUMANDisease (FA10D)121964947HV118M
16UniProtVAR_065442E350KFA10_HUMANDisease (FA10D)372309538HE129K
17UniProtVAR_065443T358MFA10_HUMANDisease (FA10D)768222784HT135M
18UniProtVAR_065444G363SFA10_HUMANDisease (FA10D)  ---HG140S
19UniProtVAR_065445R366CFA10_HUMANDisease (FA10D)104894392HR143C
20UniProtVAR_065446S374PFA10_HUMANDisease (FA10D)121964941HS152P
21UniProtVAR_072751V382AFA10_HUMANDisease (FA10D)  ---HV160A
22UniProtVAR_065447P383SFA10_HUMANDisease (FA10D)121964940HP161S
23UniProtVAR_065448C390FFA10_HUMANDisease (FA10D)199778916HC168F
24UniProtVAR_065449C404RFA10_HUMANDisease (FA10D)  ---HC182R
25UniProtVAR_065450G406SFA10_HUMANDisease (FA10D)376163818HG184S
26UniProtVAR_065451G420RFA10_HUMANDisease (FA10D)750759634HG196R
27UniProtVAR_072752G421DFA10_HUMANDisease (FA10D)758726161HG197D
28UniProtVAR_065452K448NFA10_HUMANDisease (FA10D)  ---HK224N

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)
Biological Unit 1 (28, 56)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
01UniProtVAR_065428E47GFA10_HUMANDisease (FA10D)121964943LE7G
02UniProtVAR_065429G51VFA10_HUMANDisease (FA10D)751782758LG11V
03UniProtVAR_065430E54GFA10_HUMANDisease (FA10D)121964944LE14G
04UniProtVAR_065431E54KFA10_HUMANDisease (FA10D)121964939LE14K
05UniProtVAR_065432E72QFA10_HUMANDisease (FA10D)121964945LE32Q
06UniProtVAR_075213G262DFA10_HUMANUnclassified (FA10D)  ---HG43D
07UniProtVAR_065437G289RFA10_HUMANDisease (FA10D)121964946HG69R
08UniProtVAR_065438E304KFA10_HUMANDisease (FA10D)747292771HE84K
09UniProtVAR_065434E142KFA10_HUMANUnclassified (FA10D)61753266LE102K
10UniProtVAR_065439D322NFA10_HUMANDisease (FA10D)121964942HD102N
11UniProtVAR_065440R327WFA10_HUMANDisease (FA10D)770119164HR107W
12UniProtVAR_065435C149YFA10_HUMANDisease (FA10D)  ---LC109Y
13UniProtVAR_065436C151YFA10_HUMANDisease (FA10D)  ---LC111Y
14UniProtVAR_020176A152TFA10_HUMANPolymorphism3211772LA112T
15UniProtVAR_065441V338MFA10_HUMANDisease (FA10D)121964947HV118M
16UniProtVAR_065442E350KFA10_HUMANDisease (FA10D)372309538HE129K
17UniProtVAR_065443T358MFA10_HUMANDisease (FA10D)768222784HT135M
18UniProtVAR_065444G363SFA10_HUMANDisease (FA10D)  ---HG140S
19UniProtVAR_065445R366CFA10_HUMANDisease (FA10D)104894392HR143C
20UniProtVAR_065446S374PFA10_HUMANDisease (FA10D)121964941HS152P
21UniProtVAR_072751V382AFA10_HUMANDisease (FA10D)  ---HV160A
22UniProtVAR_065447P383SFA10_HUMANDisease (FA10D)121964940HP161S
23UniProtVAR_065448C390FFA10_HUMANDisease (FA10D)199778916HC168F
24UniProtVAR_065449C404RFA10_HUMANDisease (FA10D)  ---HC182R
25UniProtVAR_065450G406SFA10_HUMANDisease (FA10D)376163818HG184S
26UniProtVAR_065451G420RFA10_HUMANDisease (FA10D)750759634HG196R
27UniProtVAR_072752G421DFA10_HUMANDisease (FA10D)758726161HG197D
28UniProtVAR_065452K448NFA10_HUMANDisease (FA10D)  ---HK224N

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

(-) PROSITE Motifs  (7, 6)

Asymmetric Unit (7, 6)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1GLA_1PS00011 Vitamin K-dependent carboxylation domain.FA10_HUMAN56-81  1L:16-41
2EGF_3PS50026 EGF-like domain profile.FA10_HUMAN86-122  1L:46-49
3EGF_CAPS01187 Calcium-binding EGF-like domain signature.FA10_HUMAN86-110  1L:46-49
4EGF_2PS01186 EGF-like domain signature 2.FA10_HUMAN110-121
149-164
  1-
L:109-124
5TRYPSIN_DOMPS50240 Serine proteases, trypsin domain profile.FA10_HUMAN235-467  1H:16-243
6TRYPSIN_HISPS00134 Serine proteases, trypsin family, histidine active site.FA10_HUMAN272-277  1H:53-58
7TRYPSIN_SERPS00135 Serine proteases, trypsin family, serine active site.FA10_HUMAN413-424  1H:189-200
Biological Unit 1 (7, 14)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1GLA_1PS00011 Vitamin K-dependent carboxylation domain.FA10_HUMAN56-81  2L:16-41
2EGF_3PS50026 EGF-like domain profile.FA10_HUMAN86-122  2L:46-49
3EGF_CAPS01187 Calcium-binding EGF-like domain signature.FA10_HUMAN86-110  2L:46-49
4EGF_2PS01186 EGF-like domain signature 2.FA10_HUMAN110-121
149-164
  2-
L:109-124
5TRYPSIN_DOMPS50240 Serine proteases, trypsin domain profile.FA10_HUMAN235-467  2H:16-243
6TRYPSIN_HISPS00134 Serine proteases, trypsin family, histidine active site.FA10_HUMAN272-277  2H:53-58
7TRYPSIN_SERPS00135 Serine proteases, trypsin family, serine active site.FA10_HUMAN413-424  2H:189-200

(-) Exons   (7, 8)

Asymmetric Unit (7, 8)
 ENSEMBLUniProtKBPDB
No.Transcript IDExonExon IDGenome LocationLengthIDLocationLengthCountLocationLength
1.1bENST000003755591bENSE00001885902chr13:113777132-113777239108FA10_HUMAN1-24240--
1.2ENST000003755592ENSE00001757906chr13:113783766-113783926161FA10_HUMAN24-77541-
L:3-37
-
35
1.4ENST000003755594ENSE00001666002chr13:113792771-11379279525FA10_HUMAN78-8691-
L:38-46
-
9
1.5ENST000003755595ENSE00001614193chr13:113793671-113793784114FA10_HUMAN86-124391-
L:46-49
-
4
1.6cENST000003755596cENSE00000862532chr13:113795233-113795364132FA10_HUMAN124-168451-
L:87-128
-
42
1.7aENST000003755597aENSE00001710199chr13:113798165-113798409245FA10_HUMAN168-249822H:16-30
L:128-138
15
11
1.8eENST000003755598eENSE00000862534chr13:113801693-113801810118FA10_HUMAN250-289401H:31-69
-
40
-
1.9cENST000003755599cENSE00001616173chr13:113803230-113803843614FA10_HUMAN289-4882001H:69-245 (gaps)
-
183
-

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain E from PDB  Type:PROTEIN  Length:139
 aligned with ECOT_ECOLI | P23827 from UniProtKB/Swiss-Prot  Length:162

    Alignment length:139
                                    33        43        53        63        73        83        93       103       113       123       133       143       153         
          ECOT_ECOLI     24 VQPLEKIAPYPQAEKGMKRQVIQLTPQEDESTLKVELLIGQTLEVDCNLHRLGGKLENKTLEGWGYDYYVFDKVSSPVSTMMACPDGKKEKKFVTAYLGDAGMLRYNSKLPIVVYTPDNVDVKYRVWKAEEKIDNAVVR  162
               SCOP domains d1p0se_ E: Ecotin, trypsin inhibitor                                                                                                        SCOP domains
               CATH domains 1p0sE00 E:4-142  [code=2.60.40.550, no name defined]                                                                                        CATH domains
               Pfam domains ---Ecotin-1p0sE01 E:7-133                                                                                                         --------- Pfam domains
         Sec.struct. author ..hhhhh.........eeeeee......hhh.eeeeeeeeeeeee.......eeeeeeee......eeeeeeeee...ee.........eeeeee.......eee......eeeeee...eeeeeeee........... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1p0s E    4 VQPLEKIAPYPQAEKGMKRQVIQLTPQEDESTLKVELLIGQTLEVDCNLHRLGGKLENKTLEGWGYDYYVFDKVSSPVSTRMACPDGKKEKKFVTAYLGDAGMLRYNSKLPIVVYTPDNVDVKYRVWKAEEKIDNAVVR  142
                                    13        23        33        43        53        63        73        83        93       103       113       123       133         

Chain H from PDB  Type:PROTEIN  Length:235
 aligned with FA10_HUMAN | P00742 from UniProtKB/Swiss-Prot  Length:488

    Alignment length:235
                                   244       254       264       274       284       294       304       314       324       334       344       354       364       374       384       394       404       414       424       434       444       454       464     
          FA10_HUMAN    235 IVGGQECKDGECPWQALLINEENEGFCGGTILSEFYILTAAHCLYQAKRFKVRVGDRNTEQEEGGEAVHEVEVVIKHNRFTKETYDFDIAVLRLKTPITFRMNVAPACLPERDWAESTLMTQKTGIVSGFGRTHEKGRQSTRLKMLEVPYVDRNSCKLSSSFIITQNMFCAGYDTKQEDACQGDSGGPHVTRFKDTYFVTGIVSWGEGCARKGKYGIYTKVTAFLKWIDRSMKTR  469
               SCOP domains d1p0sh_ H: Coagulation factor Xa, protease domain                                                                                                                                                                                           SCOP domains
               CATH domains 1p0sH01     1p0sH02 H:28-120,H:233-245 Trypsin-like serine proteases                                      1p0sH01 H:16-27,H:121-232 Trypsin-like serine proteases                                                             1p0sH02       CATH domains
               Pfam domains Trypsin-1p0sH01 H:16-238                                                                                                                                                                                                            ------- Pfam domains
         Sec.struct. author ....ee........eeeeee....eeeeeee....eeeehhhhhh....eeeee............eeeeeeeeee.............eeeee................hhhhhhhh.....eeeeee..............eeeeeeeehhhhhhhhh.......eeee................eeeeee..eeeeeeeeeee.........eeeee...hhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ---------------------------D--------------------------R--------------K-----------------N----W----------M-----------K-------M----S--C-------P-------AS------F-------------R-S-------------RD--------------------------N--------------------- SAPs(SNPs)
                PROSITE (1) TRYPSIN_DOM  PDB: H:16-243 UniProt: 235-467                                                                                                                                                                                              -- PROSITE (1)
                PROSITE (2) -------------------------------------TRYPSI---------------------------------------------------------------------------------------------------------------------------------------TRYPSIN_SER --------------------------------------------- PROSITE (2)
                PROSITE (3) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (3)
           Transcript 1 (1) ---------------Exon 1.8e  PDB: H:31-69 UniProt: 250-289------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript 1 (1)
           Transcript 1 (2) Exon 1.7a      ---------------------------------------Exon 1.9c  PDB: H:69-245 (gaps) UniProt: 289-488 [INCOMPLETE]                                                                                                                         Transcript 1 (2)
                1p0s H   16 IVGGQECKDGECPWQALLINEENEGFCGGTILSEFYILTAAHCLYQAKRFKVRVGDRNTEQEEGGEAVHEVEVVIKHNRFTKETYDFDIAVLRLKTPITFRMNVAPACLPERDWAESTLMTQKTGIVSGFGRTHEKGRQSTRLKMLEVPYVDRNSCKLSSSFIITQNMFCAGYDTKQEDACQGDSGGPHVTRFKDTYFVTGIVSWGEGCARKGKYGIYTKVTAFLKWIDRSMKTR  245
                                    25        35        45        55      | 64        74        84        94       104       114       124|     131B       141   ||  152       162       172       182   ||  190       200       210       221  |    230       240     
                                                                        61A                                                            124A    131A|           145|                                   185A|                              218|   |                      
                                                                                                                                                131B            147                                    185B                               220   |                      
                                                                                                                                                                                                                                             223A                      

Chain L from PDB  Type:PROTEIN  Length:99
 aligned with FA10_HUMAN | P00742 from UniProtKB/Swiss-Prot  Length:488

    Alignment length:136
                                    52        62        72        82        92       102       112       122       132       142       152       162       172      
          FA10_HUMAN     43 SFLEEMKKGHLERECMEETCSYEEAREVFEDSDKTNEFWNKYKDGDQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCELFTRKLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACIPTGPYPCGKQTLE  178
               SCOP domains d1p0sl2 L:3-49 Coagulation factor X            -------------------------------------d1p0sl1 L:87-138 Factor X, N-terminal module         SCOP domains
               CATH domains 1p0sL01 L:3-47 Coagulation Factor IX         1p                                     0sL02 L:48-129 Laminin                     --------- CATH domains
               Pfam domains --Gla-1p0sL01 L:5-46                        -------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhh.......-------------------------------------.....hhhhh..eeee....eeee....eee......eee............ Sec.struct. author
             SAPs(SNPs) (1) ----G---V--G-----------------Q---------------------------------------------------------------------K------Y-YT-------------------------- SAPs(SNPs) (1)
             SAPs(SNPs) (2) -----------K---------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs) (2)
                PROSITE (1) -------------GLA_1  PDB: L:16-41       ----EGF_3  PDB: L:46-49 UniProt: 86-122  --------------------------EGF_2           -------------- PROSITE (1)
                PROSITE (2) -------------------------------------------EGF_CA  PDB: L:46-49     -------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) -------------------------------------------------------------------EGF_2  PDB: --------------------------------------------------------- PROSITE (3)
           Transcript 1 (1) Exon 1.2  PDB: L:3-37 [INCOMPLETE] Exon 1.4 -------------------------------------Exon 1.6c  PDB: L:87-128 UniProt: 124-168    ---------- Transcript 1 (1)
           Transcript 1 (2) -------------------------------------------Exon 1.5  PDB: L:46-49 UniProt: 86-124 -------------------------------------------Exon 1.7a   Transcript 1 (2)
                1p0s L    3 SFLeeMKKGHLeReCMeeTCSYeeAReVFeDSDKTNeFWNKYKDGDQ-------------------------------------KLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACIPTGPYPCGKQTLE  138
                               ||   12 | |  ||22  ||  | 32      | 42      |  -         -         -         -    |   92       102       112       122       132      
                               6-CGU  14-CGU||    ||  |  |     39-CGU    49                                    87                                                   
                                7-CGU   16-CGU    ||  |  |                                                                                                          
                                           19-CGU ||  |  |                                                                                                          
                                            20-CGU||  |  |                                                                                                          
                                                 25-CGU  |                                                                                                          
                                                  26-CGU |                                                                                                          
                                                     29-CGU                                                                                                         
                                                        32-CGU                                                                                                      

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (4, 4)

Asymmetric Unit

(-) CATH Domains  (4, 5)

Asymmetric Unit
(-)
Class: Mainly Beta (13760)

(-) Pfam Domains  (3, 3)

Asymmetric Unit

(-) Gene Ontology  (28, 29)

Asymmetric Unit(hide GO term definitions)
Chain E   (ECOT_ECOLI | P23827)
molecular function
    GO:0030414    peptidase inhibitor activity    Stops, prevents or reduces the activity of a peptidase, any enzyme that catalyzes the hydrolysis peptide bonds.
    GO:0005515    protein binding    Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
    GO:0004867    serine-type endopeptidase inhibitor activity    Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme.
biological process
    GO:0010951    negative regulation of endopeptidase activity    Any process that decreases the frequency, rate or extent of endopeptidase activity, the endohydrolysis of peptide bonds within proteins.
    GO:0010466    negative regulation of peptidase activity    Any process that stops or reduces the rate of peptidase activity, the hydrolysis of peptide bonds within proteins.
cellular component
    GO:0030288    outer membrane-bounded periplasmic space    The region between the inner (cytoplasmic or plasma) membrane and outer membrane of organisms with two membranes such as Gram negative bacteria. These periplasmic spaces are relatively thick and contain a thin peptidoglycan layer (PGL), also referred to as a thin cell wall.
    GO:0042597    periplasmic space    The region between the inner (cytoplasmic) and outer membrane (Gram-negative Bacteria) or cytoplasmic membrane and cell wall (Fungi and Gram-positive Bacteria).

Chain H,L   (FA10_HUMAN | P00742)
molecular function
    GO:0005509    calcium ion binding    Interacting selectively and non-covalently with calcium ions (Ca2+).
    GO:0016787    hydrolase activity    Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
    GO:0008233    peptidase activity    Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid.
    GO:0005543    phospholipid binding    Interacting selectively and non-covalently with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester.
    GO:0005515    protein binding    Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
    GO:0004252    serine-type endopeptidase activity    Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine).
    GO:0008236    serine-type peptidase activity    Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine).
biological process
    GO:0006888    ER to Golgi vesicle-mediated transport    The directed movement of substances from the endoplasmic reticulum (ER) to the Golgi, mediated by COP II vesicles. Small COP II coated vesicles form from the ER and then fuse directly with the cis-Golgi. Larger structures are transported along microtubules to the cis-Golgi.
    GO:0007596    blood coagulation    The sequential process in which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers.
    GO:0007598    blood coagulation, extrinsic pathway    A protein activation cascade that contributes to blood coagulation and consists of the self-limited process linking exposure and activation of tissue factor to the activation of clotting factor X.
    GO:0007597    blood coagulation, intrinsic pathway    A protein activation cascade that contributes to blood coagulation and consists of the interactions among high molecular weight kininogen, prekallikrein, and factor XII that lead to the activation of clotting factor X.
    GO:0007599    hemostasis    The stopping of bleeding (loss of body fluid) or the arrest of the circulation to an organ or part.
    GO:0017187    peptidyl-glutamic acid carboxylation    The gamma-carboxylation of peptidyl-glutamic acid; catalyzed by the vitamin K dependent gamma-glutamyl carboxylase.
    GO:0030335    positive regulation of cell migration    Any process that activates or increases the frequency, rate or extent of cell migration.
    GO:0051897    positive regulation of protein kinase B signaling    Any process that activates or increases the frequency, rate or extent of protein kinase B signaling, a series of reactions mediated by the intracellular serine/threonine kinase protein kinase B.
    GO:0006508    proteolysis    The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
    GO:0006465    signal peptide processing    The proteolytic removal of a signal peptide from a protein during or after transport to a specific location in the cell.
cellular component
    GO:0005796    Golgi lumen    The volume enclosed by the membranes of any cisterna or subcompartment of the Golgi apparatus, including the cis- and trans-Golgi networks.
    GO:0005788    endoplasmic reticulum lumen    The volume enclosed by the membranes of the endoplasmic reticulum.
    GO:0005576    extracellular region    The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.
    GO:0031233    intrinsic component of external side of plasma membrane    The component of a plasma membrane consisting of gene products and protein complexes that penetrate the external side of the plasma membrane only, either directly or via some covalently attached hydrophobic anchor.
    GO:0005886    plasma membrane    The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        ECOT_ECOLI | P238271azz 1ecy 1ecz 1ezs 1ezu 1fi8 1id5 1ifg 1n8o 1slu 1slv 1slw 1slx 1xx9 1xxd 1xxf 4iw4 4niy
        FA10_HUMAN | P007421c5m 1ezq 1f0r 1f0s 1fax 1fjs 1fxy 1g2l 1g2m 1hcg 1ioe 1iqe 1iqf 1iqg 1iqh 1iqi 1iqj 1iqk 1iql 1iqm 1iqn 1ksn 1lpg 1lpk 1lpz 1lqd 1mq5 1mq6 1msx 1nfu 1nfw 1nfx 1nfy 1nl8 1v3x 1wu1 1xka 1xkb 1z6e 2bmg 2boh 2bok 2bq6 2bq7 2bqw 2cji 2d1j 2ei6 2ei7 2ei8 2fzz 2g00 2gd4 2h9e 2j2u 2j34 2j38 2j4i 2j94 2j95 2jkh 2p16 2p3f 2p3t 2p3u 2p93 2p94 2p95 2phb 2pr3 2q1j 2ra0 2uwl 2uwo 2uwp 2vh0 2vh6 2vvc 2vvu 2vvv 2vwl 2vwm 2vwn 2vwo 2w26 2w3i 2w3k 2wyg 2wyj 2xbv 2xbw 2xbx 2xby 2xc0 2xc4 2xc5 2y5f 2y5g 2y5h 2y7x 2y7z 2y80 2y81 2y82 3cen 3cs7 3ens 3ffg 3hpt 3iit 3k9x 3kl6 3kqb 3kqc 3kqd 3kqe 3liw 3m36 3m37 3q3k 3sw2 3tk5 3tk6 4a7i 4bti 4btt 4btu 4y6d 4y71 4y76 4y79 4y7a 4y7b 4zh8 4zha 5jqy 5jtc 5jz8 5jzu 5k0h

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 1P0S)