Chain A from PDB Type:PROTEIN Length:241
aligned with BLAC_STAAU | P00807 from UniProtKB/Swiss-Prot Length:281
Alignment length:257
34 44 54 64 74 84 94 104 114 124 134 144 154 164 174 184 194 204 214 224 234 244 254 264 274
BLAC_STAAU 25 KELNDLEKKYNAHIGVYALDTKSGKEVKFNSDKRFAYASTSKAINSAILLEQVPYNKLNKKVHINKDDIVAYSPILEKYVGKDITLKALIEASMTYSDNTANNKIIKEIGGIKKVKQRLKELGDKVTNPVRYEIELNYYSPKSKKDTSTPAAFGKTLNKLIANGKLSKENKKFLLDLMLNNKSGDTLIKDGVPKDYKVADKSGQAITYASRNDVAFVYPKGQSEPIVLVIFTNKDNKSDKPNDKLISETAKSVMKEF 281
SCOP domains d1omea_ A: beta-Lactamase, class A SCOP domains
CATH domains 1omeA00 A:31-290 DD-peptidase/beta-lactamase superfamily CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..hhhhhhhh.eeeeeeeee.....eeee....eee..hhhhhhhhhhhh....hhhhh.eeee...........hhhh..eeeehhhhhhhhhhh..hhhhhhhhhhh..hhhhhhhhhh........----------------.eeehhhhhhhhhhh.......hhhhhhhhhhhh........hhhh.....eeeeeee......eeeeeeeee.......eeeeeeeee........hhhhhhhhhhhhh.. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------BETA_LACTAMASE_A--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1ome A 31 KELNDLEKKYNAHIGVYALDTKSGKEVKFNSDKRFAYASTSKAINSAILLEQVPYNKLNKKVHINKDDIVAYSPILEKYVGKDITLKALIEASMTYSDNTANNKIIKEIGGIKKVKQRLKELGDKVTNP----------------DTSTPAAFGKTLNKLIANGKLSKENKKFLLDLMLNNKSGDTLIKDGVPKDYKVADKSGQAITYASRNDVAFVYPKGQSEPIVLVIFTNKDNKSDKPNDKLISETAKSVMKEF 290
40 50 ||61 71 81 || 93 103 113 123 133 143 153 |- - | 183 193 203 213 223 233 243 253 263 273 283
57| 84| 162 179
59 87
Chain B from PDB Type:PROTEIN Length:240
aligned with BLAC_STAAU | P00807 from UniProtKB/Swiss-Prot Length:281
Alignment length:256
35 45 55 65 75 85 95 105 115 125 135 145 155 165 175 185 195 205 215 225 235 245 255 265 275
BLAC_STAAU 26 ELNDLEKKYNAHIGVYALDTKSGKEVKFNSDKRFAYASTSKAINSAILLEQVPYNKLNKKVHINKDDIVAYSPILEKYVGKDITLKALIEASMTYSDNTANNKIIKEIGGIKKVKQRLKELGDKVTNPVRYEIELNYYSPKSKKDTSTPAAFGKTLNKLIANGKLSKENKKFLLDLMLNNKSGDTLIKDGVPKDYKVADKSGQAITYASRNDVAFVYPKGQSEPIVLVIFTNKDNKSDKPNDKLISETAKSVMKEF 281
SCOP domains d1omeb_ B: beta-Lactamase, class A SCOP domains
CATH domains 1omeB00 B:32-290 DD-peptidase/beta-lactamase superfamily CATH domains
Pfam domains (1) -Beta-lactamase-1omeB01 B:33-284 ------ Pfam domains (1)
Pfam domains (2) -Beta-lactamase-1omeB02 B:33-284 ------ Pfam domains (2)
Sec.struct. author .hhhhhhhh..eeeeeeee.....eeee....eee.hhhhhhhhhhhhh.....hhhh.eeee.hhh.......hhh...eeeehhhhhhhhhhh..hhhhhhhhhhh..hhhhhhhhhhh.......----------------.eeehhhhhhhhhhh.......hhhhhhhhhhhh..hhh...hhhh.....eeeeee.........eeeeeee.......eeeeeeee.........hhhhhhhhhhhh... Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------BETA_LACTAMASE_A--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1ome B 32 ELNDLEKKYNAHIGVYALDTKSGKEVKFNSDKRFAYASTSKAINSAILLEQVPYNKLNKKVHINKDDIVAYSPILEKYVGKDITLKALIEASMTYSDNTANNKIIKEIGGIKKVKQRLKELGDKVTNP----------------DTSTPAAFGKTLNKLIANGKLSKENKKFLLDLMLNNKSGDTLIKDGVPKDYKVADKSGQAITYASRNDVAFVYPKGQSEPIVLVIFTNKDNKSDKPNDKLISETAKSVMKEF 290
41 51 || 62 72 82 || 94 104 114 124 134 144 154 | - - | 184 194 204 214 224 234 244 254 264 274 284
57| 84| 162 179
59 87
Legend: |
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→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |