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(-) Description

Title :  CRYSTAL STRUCTURE OF AN HEPN DOMAIN PROTEIN (TM0613) FROM THERMOTOGA MARITIMA AT 1.75 A RESOLUTION
 
Authors :  Joint Center For Structural Genomics (Jcsg)
Date :  28 Mar 03  (Deposition) - 22 Apr 03  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.75
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (2x)
Keywords :  Structural Genomics, Joint Center For Structural Genomics, Jcsg, Protein Structure Initiative, Psi, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  H. Erlandsen, J. M. Canaves, M. A. Elsliger, F. Von Delft, L. S. Brinen X. Dai, A. M. Deacon, R. Floyd, A. Godzik, C. Grittini, S. K. Grzechnik, L. Jaroszewski, H. E. Klock, E. Koesema, J. S. Kovarik, A. Kreusch, P. Kuhn, S. A. Lesley, D. Mcmullan, T. M. Mcphillips, M. D. Miller, A. Morse, K. Moy, J. Ouyang, R. Page, A. Robb, K. Quijano, R. Schwarzenbacher, G. Spraggon, R. C. Stevens, H. Van Den Bedem, J. Velasquez, J. Vincent, X. Wang, B. West, G. Wolf, K. O. Hodgson, J. Wooley, I. A. Wilson
Crystal Structure Of An Hepn Domain Protein (Tm0613) From Thermotoga Maritima At 1. 75 A Resolution.
Proteins V. 54 806 2004
PubMed-ID: 14997578  |  Reference-DOI: 10.1002/PROT.10631

(-) Compounds

Molecule 1 - CONSERVED HYPOTHETICAL PROTEIN TM0613
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: TM0613
    Organism Scientific: THERMOTOGA MARITIMA
    Organism Taxid: 2336

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit : A
Biological Unit 1 (2x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

Asymmetric Unit (1, 1)
No.NameCountTypeFull Name
1MSE1Mod. Amino AcidSELENOMETHIONINE
Biological Unit 1 (1, 2)
No.NameCountTypeFull Name
1MSE2Mod. Amino AcidSELENOMETHIONINE

(-) Sites  (0, 0)

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(-) SS Bonds  (1, 1)

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No.Residues
1A:24 -A:79

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 Sequence-Structure Mapping

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(-) Sequences/Alignments

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Chain A from PDB  Type:PROTEIN  Length:120
 aligned with Q9WZ82_THEMA | Q9WZ82 from UniProtKB/TrEMBL  Length:123

    Alignment length:126
                               1                                                                                                                          
                               |     7        17        27        37        47        57        67        77        87        97       107       117      
         Q9WZ82_THEMA     - ---MDAAKDDLEHAKHDLEHGFYNWACFSSQQAAEKAVKAVFQRMGAQAWGYSVPDFLGELSSRFEIPEELMDHALELDKACIPTRYPDALPSGSPRNRYSRIEAERLVNYAEKIIRFCEDLLSRI 123
               SCOP domains d1o3ua_ A: Hypothetical protein TM0613                                                                                         SCOP domains
               CATH domains 1o3uA00 A:-2-123 Nucleotidyltransferases  domain 2                                                                             CATH domains
               Pfam domains ---HEPN-1o3uA01 A:1-119                                                                                                   ---- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhh.....hhhhhhhhhhhhh..------.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------ Transcript
                 1o3u A  -2 HHHMDAAKDDLEHAKHDLEHGFYNWACFSSQQAAEKAVKAVFQRmGAQAWGYSVPDFLGELSSRFEIPEELMDHALELDKAC------DALPSGSPRNRYSRIEAERLVNYAEKIIRFCEDLLSRI 123
                                     7        17        27        37    |   47        57        67        77 |      87        97       107       117      
                                                                       42-MSE                               79     86
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 Classification and Annotation

(-) SCOP Domains  (1, 1)

Asymmetric Unit
(-)
Class: All alpha proteins (14657)

(-) CATH Domains  (1, 1)

Asymmetric Unit
(-)
Class: Mainly Alpha (13335)

(-) Pfam Domains  (1, 1)

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Clan: KNTase_C (11)

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