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(-) Description

Title :  ENDO-1,4-BETA-GLUCANASE CELB2, CELLULASE, NATIVE STRUCTURE
 
Authors :  G. Sulzenbacher, C. Dupont, G. J. Davies
Date :  27 Oct 97  (Deposition) - 25 Nov 98  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.75
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (2x)
Keywords :  Glycosyl Hydrolase, Family 12, Endoglucanase, Celb2 (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  G. Sulzenbacher, F. Shareck, R. Morosoli, C. Dupont, G. J. Davies
The Streptomyces Lividans Family 12 Endoglucanase: Construction Of The Catalytic Cre, Expression, And X-Ray Structure At 1. 75 A Resolution.
Biochemistry V. 36 16032 1997
PubMed-ID: 9440876  |  Reference-DOI: 10.1021/BI972407V
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - ENDO-1,4-BETA-GLUCANASE
    ChainsA
    EC Number3.2.1.4
    EngineeredYES
    Expression SystemSTREPTOMYCES LIVIDANS
    Expression System Strain66
    Expression System Taxid1916
    FragmentCATALYTIC DOMAIN
    Fragment (source)CATALYTIC DOMAIN
    Organism ScientificSTREPTOMYCES LIVIDANS
    Organism Taxid1916
    SynonymCELB, CELB2

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit A
Biological Unit 1 (2x)A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

Asymmetric Unit (1, 1)
No.NameCountTypeFull Name
1MHO1Mod. Amino AcidS-OXYMETHIONINE
Biological Unit 1 (1, 2)
No.NameCountTypeFull Name
1MHO2Mod. Amino AcidS-OXYMETHIONINE

(-) Sites  (2, 2)

Asymmetric Unit (2, 2)
No.NameEvidenceResiduesDescription
1GABUNKNOWNGLU A:203GENERAL ACID BASE
2NFUNKNOWNGLU A:120NUCLEOPHILE

(-) SS Bonds  (2, 2)

Asymmetric Unit
No.Residues
1A:5 -A:31
2A:64 -A:69

(-) Cis Peptide Bonds  (1, 1)

Asymmetric Unit
No.Residues
1Leu A:75 -Pro A:76

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1NLR)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 1NLR)

(-) Exons   (0, 0)

(no "Exon" information available for 1NLR)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:222
 aligned with Q54331_STRLI | Q54331 from UniProtKB/TrEMBL  Length:381

    Alignment length:222
                                    50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260  
         Q54331_STRLI    41 DTTICEPFGTTTIQGRYVVQNNRWGSTAPQCVTATDTGFRVTQADGSAPTNGAPKSYPSVFNGCHYTNCSPGTDLPVRLDTVSAAPSSISYGFVDGAVYNASYDIWLDPTARTDGVNQTEIMIWFNRVGPIQPIGSPVGTASVGGRTWEVWSGGNGSNDVLSFVAPSAISGWSFDVMDFVRATVARGLAENDWYLTSVQAGFEPWQNGAGLAVNSFSSTVET 262
               SCOP domains d1nlra_ A: Family 12 endo-1,4-beta-glucanase (cellulase) catalytic domain                                                                                                                                                      SCOP domains
               CATH domains 1nlrA00 A:1-222  [code=2.60.120.180, no name defined]                                                                                                                                                                          CATH domains
               Pfam domains ----------------------------------------------------------------------Glyco_hydro_12-1nlrA01 A:71-221                                                                                                                        - Pfam domains
         Sec.struct. author .eee.....eeee...eeee.........eeeee....eeeeee.............eeeeee...............hhh....eeeeeee.....eeeeeeeeee...........eee..eeeee.......eeeeeeee..eeeeeeeee....eeeeeee.....eeeeehhhhhhhhhhh..........eeeeeeeeee.....eeeeeee.... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 1nlr A   1 DTTICEPFGTTTIQGRYVVQNNRWGSTAPQCVTATDTGFRVTQADGSAPTNGAPKSYPSVFNGCHYTNCSPGTDLPVRLDTVSAAPSSISYGFVDGAVYNASYDIWLDPTARTDGVNQTEImIWFNRVGPIQPIGSPVGTASVGGRTWEVWSGGNGSNDVLSFVAPSAISGWSFDVMDFVRATVARGLAENDWYLTSVQAGFEPWQNGAGLAVNSFSSTVET 222
                                    10        20        30        40        50        60        70        80        90       100       110       120 |     130       140       150       160       170       180       190       200       210       220  
                                                                                                                                                   122-MHO                                                                                                

   Legend:   → Mismatch (orange background)
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 1)

Asymmetric Unit

(-) CATH Domains  (1, 1)

Asymmetric Unit
(-)
Class: Mainly Beta (13760)

(-) Pfam Domains  (1, 1)

Asymmetric Unit

(-) Gene Ontology  (9, 9)

Asymmetric Unit(hide GO term definitions)
Chain A   (Q54331_STRLI | Q54331)
molecular function
    GO:0030246    carbohydrate binding    Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates.
    GO:0008810    cellulase activity    Catalysis of the endohydrolysis of (1->4)-beta-D-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans.
    GO:0016787    hydrolase activity    Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
    GO:0016798    hydrolase activity, acting on glycosyl bonds    Catalysis of the hydrolysis of any glycosyl bond.
    GO:0004553    hydrolase activity, hydrolyzing O-glycosyl compounds    Catalysis of the hydrolysis of any O-glycosyl bond.
    GO:0030247    polysaccharide binding    Interacting selectively and non-covalently with any polysaccharide, a polymer of many (typically more than 10) monosaccharide residues linked glycosidically.
biological process
    GO:0005975    carbohydrate metabolic process    The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
    GO:0008152    metabolic process    The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
    GO:0000272    polysaccharide catabolic process    The chemical reactions and pathways resulting in the breakdown of a polysaccharide, a polymer of many (typically more than 10) monosaccharide residues linked glycosidically.

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        Q54331_STRLI | Q543312nlr

(-) Related Entries Specified in the PDB File

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