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(-) Description

Title :  TURN STABILITY IN BETA-HAIRPIN PEPTIDES: 3:5 TYPE I G1 BULGE TURNS
 
Authors :  T. Blandl, A. G. Cochran, N. J. Skelton
Date :  11 Oct 02  (Deposition) - 21 Oct 03  (Release) - 24 Feb 09  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (21x)
Keywords :  Beta Hairpin, Beta-Turn, Beta-Bulge, De Novo Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  T. Blandl, A. G. Cochran, N. J. Skelton
Turn Stability In Beta-Hairpin Peptides: Investigation Of Peptides Containing 3:5 Type I G1 Bulge Turns
Protein Sci. V. 12 237 2003
PubMed-ID: 12538887  |  Reference-DOI: 10.1110/PS.0228603
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - BHPW_PDG, BETA-HAIRPIN PEPTIDE
    Chains: A
    Engineered: YES
    Other Details: THE PEPTIDE WAS CHEMICALLY SYNTHESIZED.
    Synthetic: YES

 Structural Features

(-) Chains, Units

  
NMR Structure (21x): 

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 2)

NMR Structure (2, 2)
No.NameCountTypeFull Name
1ACE1Mod. Amino AcidACETYL GROUP
2NH21Mod. Amino AcidAMINO GROUP

(-) Sites  (1, 1)

NMR Structure (1, 1)
No.NameEvidenceResiduesDescription
1AC2SOFTWARECYS A:11BINDING SITE FOR RESIDUE NH2 A 12

(-) SS Bonds  (1, 1)

NMR Structure
No.Residues
1A:1 -A:11

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 1N0A)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1N0A)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 1N0A)

(-) Exons   (0, 0)

(no "Exon" information available for 1N0A)

(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:13
                                            
               SCOP domains d1n0aa_ A:    SCOP domains
               CATH domains ------------- CATH domains
               Pfam domains ------------- Pfam domains
         Sec.struct. author ..ee.....ee.. Sec.struct. author
                 SAPs(SNPs) ------------- SAPs(SNPs)
                    PROSITE ------------- PROSITE
                 Transcript ------------- Transcript
                  1n0a A  0 xCTWEPDGKLTCx 12
                            |        9  |
                            |          12-NH2
                            0-ACE
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 1)

NMR Structure
(-)
Class: Designed proteins (167)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 1N0A)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 1N0A)

(-) Gene Ontology  (0, 0)

NMR Structure(hide GO term definitions)
    (no "Gene Ontology" information available for 1N0A)

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  1n0a
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 Related Entries

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(-) Related Entries Specified in the PDB File

1n09