1MW5 - JenaLib

Title :   STRUCTURE OF HI1480 FROM HAEMOPHILUS INFLUENZAE

Authors :   K. Lim, E. Sarikaya, A. Howard, A. Galkin, O. Herzberg, Structure 2 Function Project (S2F)

Date :   27 Sep 02 (Deposition) - 18 Nov 03 (Release) - 24 Feb 09 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.10

Chains :   Asym. Unit : A,B
Biol. Unit 1: A,B  (2x)

Keywords :   Structural Genomics, Hypothetical Protein, Structure 2 Function Project, S2F, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   K. Lim, E. Sarikaya, A. Galkin, W. Krajewski, S. Pullalarevu, J. H. Shin, Z. Kelman, A. Howard, O. Herzberg
Novel Structure And Nucleotide Binding Properties Of Hi1480 From Haemophilus Influenzae: A Protein With No Known Sequence Homologues
Proteins: V. 56 564 2004 Struct. , Funct. , Genet.
PubMed-ID: 15229888 | Reference-DOI: 10.1002/PROT.20148
(for further references see the PDB file header)

Compounds

Molecule 1 - HYPOTHETICAL PROTEIN HI1480
	Chains	:	A, B
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Plasmid	:	PET100
	Expression System Strain	:	B834(DE3)
	Expression System Taxid	:	562
	Expression System Vector Type	:	PLASMID
	Gene	:	HI1480
	Mutation	:	YES
	Organism Scientific	:	HAEMOPHILUS INFLUENZAE
	Organism Taxid	:	727

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (1, 6)

Asymmetric Unit (1, 6)

No.	Name	Count	Type	Full Name
1	MSE	6	Mod. Amino Acid	SELENOMETHIONINE

Biological Unit 1 (1, 12)

No.	Name	Count	Type	Full Name
1	MSE	12	Mod. Amino Acid	SELENOMETHIONINE

Sites (0, 0)

SS Bonds (0, 0)

Cis Peptide Bonds (0, 0)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (0, 0)

Exons (0, 0)

Sequences/Alignments

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
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Chain A from PDB  Type:PROTEIN  Length:162
 aligned with Y1480_HAEIN | P44209 from UniProtKB/Swiss-Prot  Length:156

    Alignment length:162
                                                                                                                                                                                   156        
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152   |     -  
          Y1480_HAEIN     3 ETDLLLKMVRQPVKLYSVATLFHEFSEVITKLEHSVQKEPTSLLSEENWHKQFLKFAQALPAHGSASWLNLDDALQAVVGNSRSAFLHQLIAKLKSRHLQVLELNKIGSEPLDLSNLPAPFYVLLPESFAARITLLVQDKALPYVRVSFEYWHA--------   -
               SCOP domains d1mw5a_ A: Hypothetical protein HI1480                                                                                                                             SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author hhhhhhhhhh..eeeehhhhhhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhh.......hhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhh..ee..ee..eeeeee.hhhhhhhhhhhh.eeeeeeeeeee.hhhh...... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 1mw5 A   3 ETDLLmKmVRQPVKLYSVATLFHEFSEVITKLEHSVQKEPTSLLSEENWHKQFLKFAQALPAHGSASWLNLDDALQAVVGNSRSAFLHQLIAKLKSRHLQVLELNKIGSEPLDLSNLPAPFYVLLPESFAARITLLVQDKALPYVRVSmEYWHALEYKGELN 164
                                 | |12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162  
                                 8-MSE                                                                                                                                        151-MSE         
                                  10-MSE

Chain B from PDB  Type:PROTEIN  Length:162
 aligned with Y1480_HAEIN | P44209 from UniProtKB/Swiss-Prot  Length:156

    Alignment length:162
                                                                                                                                                                                   156        
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152   |     -  
          Y1480_HAEIN     3 ETDLLLKMVRQPVKLYSVATLFHEFSEVITKLEHSVQKEPTSLLSEENWHKQFLKFAQALPAHGSASWLNLDDALQAVVGNSRSAFLHQLIAKLKSRHLQVLELNKIGSEPLDLSNLPAPFYVLLPESFAARITLLVQDKALPYVRVSFEYWHA--------   -
               SCOP domains d1mw5b_ B: Hypothetical protein HI1480                                                                                                                             SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author hhhhhhhhhh..eeeehhhhhhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..ee..ee..eeeeee.hhhhhhhhhhhh.eeeeeeeeeee.hhhh...... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 1mw5 B   3 ETDLLmKmVRQPVKLYSVATLFHEFSEVITKLEHSVQKEPTSLLSEENWHKQFLKFAQALPAHGSASWLNLDDALQAVVGNSRSAFLHQLIAKLKSRHLQVLELNKIGSEPLDLSNLPAPFYVLLPESFAARITLLVQDKALPYVRVSmEYWHALEYKGELN 164
                                 | |12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162  
                                 8-MSE                                                                                                                                        151-MSE         
                                  10-MSE

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Classification and Annotation

SCOP Domains (1, 2)

CATH Domains (0, 0)

Pfam Domains (0, 0)

Gene Ontology (0, 0)

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