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(-) Description

Title :  CRYSTAL STRUCTURE OF 2-AMINOETHYLPHOSPHONATE TRANSAMINASE
 
Authors :  C. C. H. Chen, H. Zhang, A. D. Kim, A. Howard, G. M. Sheldrick, D. Mariano- O. Herzberg
Date :  26 Jun 02  (Deposition) - 20 Nov 02  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.20
Chains :  Asym. Unit :  A,B,C,D,E,F
Biol. Unit 1:  A,B  (1x)
Biol. Unit 2:  C,D  (1x)
Biol. Unit 3:  E,F  (1x)
Keywords :  Plp-Dependent Aminotransferase Fold, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  C. C. H. Chen, H. Zhang, A. D. Kim, A. Howard, G. M. Sheldrick, D. Mariano-Dunnaway, O. Herzberg
Degradation Pathway Of The Phosphonate Ciliatine: Crystal Structure Of 2-Aminoethylphosphonate Transaminase
Biochemistry V. 41 13162 2002
PubMed-ID: 12403617  |  Reference-DOI: 10.1021/BI026231V

(-) Compounds

Molecule 1 - 2-AMINOETHYLPHOSPHONATE-PYRUVATE AMINOTRANSFERASE
    Chains: A, B, C, D, E, F
    EC Number: 2.6.1.37
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET3A
    Expression System Strain: B384(DE3)
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Organism Scientific: SALMONELLA TYPHIMURIUM
    Organism Taxid: 602
    Synonym: AEP-TRANSAMINASE

 Structural Features

(-) Chains, Units

  123456
Asymmetric Unit : ABCDEF
Biological Unit 1 (1x): AB    
Biological Unit 2 (1x):   CD  
Biological Unit 3 (1x):     EF

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (4, 78)

Asymmetric Unit (4, 78)
No.NameCountTypeFull Name
1MSE66Mod. Amino AcidSELENOMETHIONINE
2PLP6Ligand/IonPYRIDOXAL-5'-PHOSPHATE
3PO44Ligand/IonPHOSPHATE ION
4POA2Ligand/IonPHOSPHONOACETALDEHYDE
Biological Unit 1 (4, 26)
No.NameCountTypeFull Name
1MSE22Mod. Amino AcidSELENOMETHIONINE
2PLP2Ligand/IonPYRIDOXAL-5'-PHOSPHATE
3PO41Ligand/IonPHOSPHATE ION
4POA1Ligand/IonPHOSPHONOACETALDEHYDE
Biological Unit 2 (4, 26)
No.NameCountTypeFull Name
1MSE22Mod. Amino AcidSELENOMETHIONINE
2PLP2Ligand/IonPYRIDOXAL-5'-PHOSPHATE
3PO41Ligand/IonPHOSPHATE ION
4POA1Ligand/IonPHOSPHONOACETALDEHYDE
Biological Unit 3 (3, 26)
No.NameCountTypeFull Name
1MSE22Mod. Amino AcidSELENOMETHIONINE
2PLP2Ligand/IonPYRIDOXAL-5'-PHOSPHATE
3PO42Ligand/IonPHOSPHATE ION
4POA-1Ligand/IonPHOSPHONOACETALDEHYDE

(-) Sites  (12, 12)

Asymmetric Unit (12, 12)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREGLY B:11 , TYR B:91 , TYR B:328 , HOH B:4949 , HOH B:4952 , HOH B:4956 , HOH B:4964 , HOH B:5068BINDING SITE FOR RESIDUE PO4 B 4602
02AC2SOFTWARETRP C:30 , THR C:242 , HOH C:4944 , TYR D:91 , TYR D:328 , HOH D:4753 , HOH D:4840 , HOH D:4868 , HOH D:4903BINDING SITE FOR RESIDUE PO4 C 4604
03AC3SOFTWARETYR E:91 , TYR E:328 , HOH E:4975 , HOH E:4978 , HOH E:4979 , HOH E:4981 , HOH E:5090 , THR F:242BINDING SITE FOR RESIDUE PO4 E 4605
04AC4SOFTWARETHR E:242 , HOH E:4987 , TYR F:91 , TYR F:328 , HOH F:4986 , HOH F:4987 , HOH F:5097 , HOH F:5101 , HOH F:5136BINDING SITE FOR RESIDUE PO4 F 4606
05AC5SOFTWARESER A:64 , GLY A:65 , SER A:66 , TYR A:91 , VAL A:138 , SER A:140 , THR A:142 , ASP A:167 , MSE A:169 , HOH A:4662 , HOH A:4669 , HOH A:4959 , HOH A:5101 , PHE B:241 , THR B:242BINDING SITE FOR RESIDUE PLP A 4401
06AC6SOFTWARETYR A:91 , TYR A:328 , ARG A:339 , HOH A:4883 , HOH A:4960 , HOH A:4961 , HOH A:4962 , HOH A:4979 , HOH A:5101 , HOH B:4987BINDING SITE FOR RESIDUE POA A 4601
07AC7SOFTWARETHR A:242 , SER B:64 , GLY B:65 , SER B:66 , TYR B:91 , VAL B:138 , SER B:140 , THR B:142 , ASP B:167 , MSE B:169 , SER B:170 , LYS B:193 , HOH B:4616 , HOH B:4727 , HOH B:4949 , HOH B:5108BINDING SITE FOR RESIDUE PLP B 4402
08AC8SOFTWARESER C:64 , GLY C:65 , SER C:66 , TYR C:91 , VAL C:138 , SER C:140 , THR C:142 , ASP C:167 , MSE C:169 , LYS C:193 , POA C:4603 , HOH C:4618 , HOH C:4691 , HOH C:4942 , HOH C:5085 , PHE D:241 , THR D:242BINDING SITE FOR RESIDUE PLP C 4403
09AC9SOFTWARETYR C:91 , TYR C:328 , ARG C:339 , PLP C:4403 , HOH C:4816 , HOH C:4942 , HOH C:4972 , HOH C:5062 , HOH C:5085 , THR D:242BINDING SITE FOR RESIDUE POA C 4603
10BC1SOFTWAREPHE C:241 , THR C:242 , SER D:64 , GLY D:65 , SER D:66 , TYR D:91 , VAL D:138 , SER D:140 , THR D:142 , ASP D:167 , MSE D:169 , HOH D:4425 , HOH D:4498 , HOH D:4753 , HOH D:4903BINDING SITE FOR RESIDUE PLP D 4404
11BC2SOFTWARESER E:64 , GLY E:65 , SER E:66 , TYR E:91 , VAL E:138 , SER E:140 , THR E:142 , ASP E:167 , MSE E:169 , SER E:170 , HOH E:4629 , HOH E:4689 , HOH E:4975 , HOH E:5123 , PHE F:241 , THR F:242BINDING SITE FOR RESIDUE PLP E 4405
12BC3SOFTWAREPHE E:241 , THR E:242 , SER F:64 , GLY F:65 , SER F:66 , TYR F:91 , VAL F:138 , SER F:140 , THR F:142 , ASP F:167 , MSE F:169 , LYS F:193 , HOH F:4617 , HOH F:4666 , HOH F:4986 , HOH F:5136BINDING SITE FOR RESIDUE PLP F 4406

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1M32)

(-) Cis Peptide Bonds  (6, 6)

Asymmetric Unit
No.Residues
1Gly A:11 -Pro A:12
2Gly B:11 -Pro B:12
3Gly C:11 -Pro C:12
4Gly D:11 -Pro D:12
5Gly E:11 -Pro E:12
6Gly F:11 -Pro F:12

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1M32)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 1M32)

(-) Exons   (0, 0)

(no "Exon" information available for 1M32)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:361
 aligned with PHNW_SALTY | P96060 from UniProtKB/Swiss-Prot  Length:367

    Alignment length:361
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365 
           PHNW_SALTY     6 YLLLTPGPLTTSRTVKEAMLFDSCTWDDDYNIGVVEQIRQQLTALATASEGYTSVLLQGSGSYAVEAVLGSALGPQDKVLIVSNGAYGARMVEMAGLMGIAHHAYDCGEVARPDVQAIDAILNADPTISHIAMVHSETTTGMLNPIDEVGALAHRYGKTYIVDAMSSFGGIPMDIAALHIDYLISSANKCIQGVPGFAFVIAREQKLAACKGHSRSLSLDLYAQWRCMEDNHGKWRFTSPTHTVLAFAQALKELAKEGGVAARHQRYQQNQRSLVAGMRALGFNTLLDDELHSPIITAFYSPEDPQYRFSEFYRRLKEQGFVIYPGKVSQSDCFRIGNIGEVYAADITALLTAIRTAMYWT 366
               SCOP domains d1m32a_ A: 2-aminoethylphosphonate transaminase                                                                                                                                                                                                                                                                                                                           SCOP domains
               CATH domains 1m32A01    1m32A02 A:16-261 Type I PLP-dependent aspartate aminotransferase-like (Major domain)                                                                                                                                                                  1m32A01 A:5-15,A:262-361 Aspartate Aminotransferase, domain 1                                       ---- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .ee........hhhhhhh........hhhhhh.hhhhhhhhhhhhhh....eeeeeee.hhhhhhhhhhhhh......eeeee.hhhhhhhhhhhhhhh..eeeee.......hhhhhhhhhhhh....eeeee..........hhhhhhhhhhhhh.eeeee..................eeeee..........eeeeeeehhhhh...........hhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhh...eeeee.......hhhhhhhhhhhh.ee.ee.......eeeee.....hhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1m32 A   5 YLLLTPGPLTTSRTVKEAmLFDSCTWDDDYNIGVVEQIRQQLTALATASEGYTSVLLQGSGSYAVEAVLGSALGPQDKVLIVSNGAYGARmVEmAGLmGIAHHAYDCGEVARPDVQAIDAILNADPTISHIAmVHSETTTGmLNPIDEVGALAHRYGKTYIVDAmSSFGGIPmDIAALHIDYLISSANKCIQGVPGFAFVIAREQKLAACKGHSRSLSLDLYAQWRCmEDNHGKWRFTSPTHTVLAFAQALKELAKEGGVAARHQRYQQNQRSLVAGmRALGFNTLLDDELHSPIITAFYSPEDPQYRFSEFYRRLKEQGFVIYPGKVSQSDCFRIGNIGEVYAADITALLTAIRTAmYWT 365
                                    14        24        34        44        54        64        74        84        94|  |   104       114       124       134  |    144 |     154       164    |  174  |    184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364 
                                             23-MSE                                                                  95-MSE  |                                137-MSE  146-MSE                169-MSE 177-MSE                                                232-MSE                                           282-MSE                                                                         362-MSE
                                                                                                                        98-MSE                                                                                                                                                                                                                                                                       
                                                                                                                           102-MSE                                                                                                                                                                                                                                                                   


Chain B from PDB  Type:PROTEIN  Length:362
 aligned with PHNW_SALTY | P96060 from UniProtKB/Swiss-Prot  Length:367

    Alignment length:362
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364  
           PHNW_SALTY     5 NYLLLTPGPLTTSRTVKEAMLFDSCTWDDDYNIGVVEQIRQQLTALATASEGYTSVLLQGSGSYAVEAVLGSALGPQDKVLIVSNGAYGARMVEMAGLMGIAHHAYDCGEVARPDVQAIDAILNADPTISHIAMVHSETTTGMLNPIDEVGALAHRYGKTYIVDAMSSFGGIPMDIAALHIDYLISSANKCIQGVPGFAFVIAREQKLAACKGHSRSLSLDLYAQWRCMEDNHGKWRFTSPTHTVLAFAQALKELAKEGGVAARHQRYQQNQRSLVAGMRALGFNTLLDDELHSPIITAFYSPEDPQYRFSEFYRRLKEQGFVIYPGKVSQSDCFRIGNIGEVYAADITALLTAIRTAMYWT 366
               SCOP domains d1m32b_ B: 2-aminoethylphosphonate transaminase                                                                                                                                                                                                                                                                                                                            SCOP domains
               CATH domains -1m32B01    1m32B02 B:16-261 Type I PLP-dependent aspartate aminotransferase-like (Major domain)                                                                                                                                                                  1m32B01 B:5-15,B:262-361 Aspartate Aminotransferase, domain 1                                       ---- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..ee........hhhhhhh........hhhhhh.hhhhhhhhhhhhhh....eeeeeee.hhhhhhhhhhhhh......eeeee.hhhhhhhhhhhhhh...eeeee.......hhhhhhhhhhhh....eeeee..........hhhhhhhhhhhh..eeeee..................eeeee..........eeeeeeehhhhh...........hhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhh...eeeee.......hhhhhhhhhhhh.ee.ee.......eeeee.....hhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1m32 B   4 NYLLLTPGPLTTSRTVKEAmLFDSCTWDDDYNIGVVEQIRQQLTALATASEGYTSVLLQGSGSYAVEAVLGSALGPQDKVLIVSNGAYGARmVEmAGLmGIAHHAYDCGEVARPDVQAIDAILNADPTISHIAmVHSETTTGmLNPIDEVGALAHRYGKTYIVDAmSSFGGIPmDIAALHIDYLISSANKCIQGVPGFAFVIAREQKLAACKGHSRSLSLDLYAQWRCmEDNHGKWRFTSPTHTVLAFAQALKELAKEGGVAARHQRYQQNQRSLVAGmRALGFNTLLDDELHSPIITAFYSPEDPQYRFSEFYRRLKEQGFVIYPGKVSQSDCFRIGNIGEVYAADITALLTAIRTAmYWT 365
                                    13        23        33        43        53        63        73        83        93 |  |  103       113       123       133   |   143  |    153       163     | 173   |   183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363  
                                              23-MSE                                                                  95-MSE  |                                137-MSE  146-MSE                169-MSE 177-MSE                                                232-MSE                                           282-MSE                                                                         362-MSE
                                                                                                                         98-MSE                                                                                                                                                                                                                                                                       
                                                                                                                            102-MSE                                                                                                                                                                                                                                                                   


Chain C from PDB  Type:PROTEIN  Length:361
 aligned with PHNW_SALTY | P96060 from UniProtKB/Swiss-Prot  Length:367

    Alignment length:361
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365 
           PHNW_SALTY     6 YLLLTPGPLTTSRTVKEAMLFDSCTWDDDYNIGVVEQIRQQLTALATASEGYTSVLLQGSGSYAVEAVLGSALGPQDKVLIVSNGAYGARMVEMAGLMGIAHHAYDCGEVARPDVQAIDAILNADPTISHIAMVHSETTTGMLNPIDEVGALAHRYGKTYIVDAMSSFGGIPMDIAALHIDYLISSANKCIQGVPGFAFVIAREQKLAACKGHSRSLSLDLYAQWRCMEDNHGKWRFTSPTHTVLAFAQALKELAKEGGVAARHQRYQQNQRSLVAGMRALGFNTLLDDELHSPIITAFYSPEDPQYRFSEFYRRLKEQGFVIYPGKVSQSDCFRIGNIGEVYAADITALLTAIRTAMYWT 366
               SCOP domains d1m32c_ C: 2-aminoethylphosphonate transaminase                                                                                                                                                                                                                                                                                                                           SCOP domains
               CATH domains 1m32C01    1m32C02 C:16-261 Type I PLP-dependent aspartate aminotransferase-like (Major domain)                                                                                                                                                                  1m32C01 C:5-15,C:262-361 Aspartate Aminotransferase, domain 1                                       ---- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .ee........hhhhhhh........hhhhhh.hhhhhhhhhhhhhh....eeeeeee.hhhhhhhhhhhhh......eeeee.hhhhhhhhhhhhhhh..eeeee.......hhhhhhhhhhhh....eeeee..........hhhhhhhhhhhh..eeeee..................eeeee..........eeeeeeehhhhh...........hhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhh...eeeee.......hhhhhhhhhhh..ee.ee.......eeeee.....hhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1m32 C   5 YLLLTPGPLTTSRTVKEAmLFDSCTWDDDYNIGVVEQIRQQLTALATASEGYTSVLLQGSGSYAVEAVLGSALGPQDKVLIVSNGAYGARmVEmAGLmGIAHHAYDCGEVARPDVQAIDAILNADPTISHIAmVHSETTTGmLNPIDEVGALAHRYGKTYIVDAmSSFGGIPmDIAALHIDYLISSANKCIQGVPGFAFVIAREQKLAACKGHSRSLSLDLYAQWRCmEDNHGKWRFTSPTHTVLAFAQALKELAKEGGVAARHQRYQQNQRSLVAGmRALGFNTLLDDELHSPIITAFYSPEDPQYRFSEFYRRLKEQGFVIYPGKVSQSDCFRIGNIGEVYAADITALLTAIRTAmYWT 365
                                    14        24        34        44        54        64        74        84        94|  |   104       114       124       134  |    144 |     154       164    |  174  |    184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364 
                                             23-MSE                                                                  95-MSE  |                                137-MSE  146-MSE                169-MSE 177-MSE                                                232-MSE                                           282-MSE                                                                         362-MSE
                                                                                                                        98-MSE                                                                                                                                                                                                                                                                       
                                                                                                                           102-MSE                                                                                                                                                                                                                                                                   


Chain D from PDB  Type:PROTEIN  Length:362
 aligned with PHNW_SALTY | P96060 from UniProtKB/Swiss-Prot  Length:367

    Alignment length:362
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364  
           PHNW_SALTY     5 NYLLLTPGPLTTSRTVKEAMLFDSCTWDDDYNIGVVEQIRQQLTALATASEGYTSVLLQGSGSYAVEAVLGSALGPQDKVLIVSNGAYGARMVEMAGLMGIAHHAYDCGEVARPDVQAIDAILNADPTISHIAMVHSETTTGMLNPIDEVGALAHRYGKTYIVDAMSSFGGIPMDIAALHIDYLISSANKCIQGVPGFAFVIAREQKLAACKGHSRSLSLDLYAQWRCMEDNHGKWRFTSPTHTVLAFAQALKELAKEGGVAARHQRYQQNQRSLVAGMRALGFNTLLDDELHSPIITAFYSPEDPQYRFSEFYRRLKEQGFVIYPGKVSQSDCFRIGNIGEVYAADITALLTAIRTAMYWT 366
               SCOP domains d1m32d_ D: 2-aminoethylphosphonate transaminase                                                                                                                                                                                                                                                                                                                            SCOP domains
               CATH domains -1m32D01    1m32D02 D:16-261 Type I PLP-dependent aspartate aminotransferase-like (Major domain)                                                                                                                                                                  1m32D01 D:5-15,D:262-361 Aspartate Aminotransferase, domain 1                                       ---- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..ee........hhhhhhh........hhhhhh.hhhhhhhhhhhhhh....eeeeeee.hhhhhhhhhhhhh......eeeee.hhhhhhhhhhhhhhh..eeeee.......hhhhhhhhhhhh....eeeee..........hhhhhhhhhhhh..eeeee..................eeeee..........eeeeeeehhhhh...........hhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhh...eeeee.......hhhhhhhhhhh..ee.ee.......eeeee.....hhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1m32 D   4 NYLLLTPGPLTTSRTVKEAmLFDSCTWDDDYNIGVVEQIRQQLTALATASEGYTSVLLQGSGSYAVEAVLGSALGPQDKVLIVSNGAYGARmVEmAGLmGIAHHAYDCGEVARPDVQAIDAILNADPTISHIAmVHSETTTGmLNPIDEVGALAHRYGKTYIVDAmSSFGGIPmDIAALHIDYLISSANKCIQGVPGFAFVIAREQKLAACKGHSRSLSLDLYAQWRCmEDNHGKWRFTSPTHTVLAFAQALKELAKEGGVAARHQRYQQNQRSLVAGmRALGFNTLLDDELHSPIITAFYSPEDPQYRFSEFYRRLKEQGFVIYPGKVSQSDCFRIGNIGEVYAADITALLTAIRTAmYWT 365
                                    13        23        33        43        53        63        73        83        93 |  |  103       113       123       133   |   143  |    153       163     | 173   |   183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363  
                                              23-MSE                                                                  95-MSE  |                                137-MSE  146-MSE                169-MSE 177-MSE                                                232-MSE                                           282-MSE                                                                         362-MSE
                                                                                                                         98-MSE                                                                                                                                                                                                                                                                       
                                                                                                                            102-MSE                                                                                                                                                                                                                                                                   


Chain E from PDB  Type:PROTEIN  Length:361
 aligned with PHNW_SALTY | P96060 from UniProtKB/Swiss-Prot  Length:367

    Alignment length:361
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365 
           PHNW_SALTY     6 YLLLTPGPLTTSRTVKEAMLFDSCTWDDDYNIGVVEQIRQQLTALATASEGYTSVLLQGSGSYAVEAVLGSALGPQDKVLIVSNGAYGARMVEMAGLMGIAHHAYDCGEVARPDVQAIDAILNADPTISHIAMVHSETTTGMLNPIDEVGALAHRYGKTYIVDAMSSFGGIPMDIAALHIDYLISSANKCIQGVPGFAFVIAREQKLAACKGHSRSLSLDLYAQWRCMEDNHGKWRFTSPTHTVLAFAQALKELAKEGGVAARHQRYQQNQRSLVAGMRALGFNTLLDDELHSPIITAFYSPEDPQYRFSEFYRRLKEQGFVIYPGKVSQSDCFRIGNIGEVYAADITALLTAIRTAMYWT 366
               SCOP domains d1m32e_ E: 2-aminoethylphosphonate transaminase                                                                                                                                                                                                                                                                                                                           SCOP domains
               CATH domains 1m32E01    1m32E02 E:16-261 Type I PLP-dependent aspartate aminotransferase-like (Major domain)                                                                                                                                                                  1m32E01 E:5-15,E:262-361 Aspartate Aminotransferase, domain 1                                       ---- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .ee........hhhhhhh........hhhhhh.hhhhhhhhhhhhhh....eeeeeee.hhhhhhhhhhhhh......eeeee.hhhhhhhhhhhhhhh..eeeee.......hhhhhhhhhhhh....eeeee..........hhhhhhhhhhhh..eeeee..................eeeee..........eeeeeeehhhhh...........hhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhh...eeeee.......hhhhhhhhhhhh.ee.ee.......eeeee.....hhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1m32 E   5 YLLLTPGPLTTSRTVKEAmLFDSCTWDDDYNIGVVEQIRQQLTALATASEGYTSVLLQGSGSYAVEAVLGSALGPQDKVLIVSNGAYGARmVEmAGLmGIAHHAYDCGEVARPDVQAIDAILNADPTISHIAmVHSETTTGmLNPIDEVGALAHRYGKTYIVDAmSSFGGIPmDIAALHIDYLISSANKCIQGVPGFAFVIAREQKLAACKGHSRSLSLDLYAQWRCmEDNHGKWRFTSPTHTVLAFAQALKELAKEGGVAARHQRYQQNQRSLVAGmRALGFNTLLDDELHSPIITAFYSPEDPQYRFSEFYRRLKEQGFVIYPGKVSQSDCFRIGNIGEVYAADITALLTAIRTAmYWT 365
                                    14        24        34        44        54        64        74        84        94|  |   104       114       124       134  |    144 |     154       164    |  174  |    184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364 
                                             23-MSE                                                                  95-MSE  |                                137-MSE  146-MSE                169-MSE 177-MSE                                                232-MSE                                           282-MSE                                                                         362-MSE
                                                                                                                        98-MSE                                                                                                                                                                                                                                                                       
                                                                                                                           102-MSE                                                                                                                                                                                                                                                                   


Chain F from PDB  Type:PROTEIN  Length:362
 aligned with PHNW_SALTY | P96060 from UniProtKB/Swiss-Prot  Length:367

    Alignment length:362
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364  
           PHNW_SALTY     5 NYLLLTPGPLTTSRTVKEAMLFDSCTWDDDYNIGVVEQIRQQLTALATASEGYTSVLLQGSGSYAVEAVLGSALGPQDKVLIVSNGAYGARMVEMAGLMGIAHHAYDCGEVARPDVQAIDAILNADPTISHIAMVHSETTTGMLNPIDEVGALAHRYGKTYIVDAMSSFGGIPMDIAALHIDYLISSANKCIQGVPGFAFVIAREQKLAACKGHSRSLSLDLYAQWRCMEDNHGKWRFTSPTHTVLAFAQALKELAKEGGVAARHQRYQQNQRSLVAGMRALGFNTLLDDELHSPIITAFYSPEDPQYRFSEFYRRLKEQGFVIYPGKVSQSDCFRIGNIGEVYAADITALLTAIRTAMYWT 366
               SCOP domains d1m32f_ F: 2-aminoethylphosphonate transaminase                                                                                                                                                                                                                                                                                                                            SCOP domains
               CATH domains -1m32F01    1m32F02 F:16-261 Type I PLP-dependent aspartate aminotransferase-like (Major domain)                                                                                                                                                                  1m32F01 F:5-15,F:262-361 Aspartate Aminotransferase, domain 1                                       ---- CATH domains
           Pfam domains (1) -------------------------------Aminotran_5-1m32F01 F:35-330                                                                                                                                                                                                                                                                            ----------------------------------- Pfam domains (1)
           Pfam domains (2) -------------------------------Aminotran_5-1m32F02 F:35-330                                                                                                                                                                                                                                                                            ----------------------------------- Pfam domains (2)
           Pfam domains (3) -------------------------------Aminotran_5-1m32F03 F:35-330                                                                                                                                                                                                                                                                            ----------------------------------- Pfam domains (3)
           Pfam domains (4) -------------------------------Aminotran_5-1m32F04 F:35-330                                                                                                                                                                                                                                                                            ----------------------------------- Pfam domains (4)
           Pfam domains (5) -------------------------------Aminotran_5-1m32F05 F:35-330                                                                                                                                                                                                                                                                            ----------------------------------- Pfam domains (5)
           Pfam domains (6) -------------------------------Aminotran_5-1m32F06 F:35-330                                                                                                                                                                                                                                                                            ----------------------------------- Pfam domains (6)
         Sec.struct. author ..ee........hhhhhhh........hhhhhh.hhhhhhhhhhhhhh....eeeeeee.hhhhhhhhhhhhh......eeeee.hhhhhhhhhhhhhhh..eeeee.......hhhhhhhhhhhh....eeeee..........hhhhhhhhhhhh..eeeee..................eeeee..........eeeeeeehhhhh...........hhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhh...eeeee.......hhhhhhhhhhh..ee.ee.......eeeee.....hhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1m32 F   4 NYLLLTPGPLTTSRTVKEAmLFDSCTWDDDYNIGVVEQIRQQLTALATASEGYTSVLLQGSGSYAVEAVLGSALGPQDKVLIVSNGAYGARmVEmAGLmGIAHHAYDCGEVARPDVQAIDAILNADPTISHIAmVHSETTTGmLNPIDEVGALAHRYGKTYIVDAmSSFGGIPmDIAALHIDYLISSANKCIQGVPGFAFVIAREQKLAACKGHSRSLSLDLYAQWRCmEDNHGKWRFTSPTHTVLAFAQALKELAKEGGVAARHQRYQQNQRSLVAGmRALGFNTLLDDELHSPIITAFYSPEDPQYRFSEFYRRLKEQGFVIYPGKVSQSDCFRIGNIGEVYAADITALLTAIRTAmYWT 365
                                    13        23        33        43        53        63        73        83        93 |  |  103       113       123       133   |   143  |    153       163     | 173   |   183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363  
                                              23-MSE                                                                  95-MSE  |                                137-MSE  146-MSE                169-MSE 177-MSE                                                232-MSE                                           282-MSE                                                                         362-MSE
                                                                                                                         98-MSE                                                                                                                                                                                                                                                                       
                                                                                                                            102-MSE
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 Classification and Annotation

(-) SCOP Domains  (1, 6)

Asymmetric Unit
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (2, 12)

Asymmetric Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (1, 6)

Asymmetric Unit
(-)
Clan: PLP_aminotran (240)

(-) Gene Ontology  (5, 5)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D,E,F   (PHNW_SALTY | P96060)
molecular function
    GO:0047304    2-aminoethylphosphonate-pyruvate transaminase activity    Catalysis of the reaction: (2-aminoethyl)phosphonate + pyruvate = L-alanine + phosphonoacetaldehyde.
    GO:0003824    catalytic activity    Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
    GO:0008483    transaminase activity    Catalysis of the transfer of an amino group to an acceptor, usually a 2-oxo acid.
    GO:0016740    transferase activity    Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.
biological process
    GO:0019700    organic phosphonate catabolic process    The chemical reactions and pathways resulting in the breakdown of phosphonates, any organic compound containing one or more C-PO(OH)2 or C-PO(OR)2 (with R=alkyl, aryl) groups. Catabolism of phosphonic acid itself, an inorganic compound without the biochemically relevant C-P bond, is not included.

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