1LTR - JenaLib

Asymmetric Unit (Jmol Viewer)

Asym. Unit - sites (Jmol Viewer)

Biological Unit 1 (Jmol Viewer)

Biol. Unit 1 - sites (Jmol Viewer)

Biological Unit 2 (Jmol Viewer)

Title :   CRYSTAL STRUCTURE OF THE B SUBUNIT OF HUMAN HEAT-LABILE ENTEROTOXIN FROM E. COLI CARRYING A PEPTIDE WITH ANTI-HSV ACTIVITY

Authors :   D. Matkovic-Calogovic, A. Loreggian, G. Palu, G. Zanotti

Date :   31 Jul 98 (Deposition) - 09 Feb 99 (Release) - 24 Feb 09 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   3.04

Chains :   Asym. Unit : D,E,F,G,H
Biol. Unit 1: D,E,F,G,H  (1x)
Biol. Unit 2: D,E,F,G,H  (2x)

Keywords :   B Subunit, Heat-Labile Enterotoxin, Anti-Hsv (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   D. Matkovic-Calogovic, A. Loregian, M. R. D'Acunto, R. Battistutta, A. Tossi, G. Palu, G. Zanotti
Crystal Structure Of The B Subunit Of Escherichia Coli Heat-Labile Enterotoxin Carrying Peptides With Anti-Herpes Simplex Virus Type 1 Activity.
J. Biol. Chem. V. 274 8764 1999
PubMed-ID: 10085117
(for further references see the PDB file header)

Molecule 1 - HEAT-LABILE ENTEROTOXIN
	Chains	:	D, E, F, G, H
	Engineered	:	YES
	Expression System	:	VIBRIO SP.
	Expression System Plasmid	:	PAM320
	Expression System Strain	:	SP60
	Expression System Taxid	:	678
	Expression System Vector Type	:	PLASMID
	Fragment	:	SUBUNIT B-R2
	Mutation	:	YES
	Organism Scientific	:	ESCHERICHIA COLI
	Organism Taxid	:	562
	Other Details	:	THE B SUBUNIT HAS A PEPTIDE WITH ANTI-HSV ACTIVITY AS AN EXTENSION, RESIDUES 104-113
	Synonym	:	ETB-R2

		1	2	3	4	5
Asymmetric Unit	:	D	E	F	G	H
Biological Unit 1 (1x)	:	D	E	F	G	H
Biological Unit 2 (2x)	:	D	E	F	G	H

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (1, 6)

No.	Name	Count	Type	Full Name
1	SO4	6	Ligand/Ion	SULFATE ION

Biological Unit 1 (1, 6)

No.	Name	Count	Type	Full Name
1	SO4	6	Ligand/Ion	SULFATE ION

Biological Unit 2 (1, 12)

No.	Name	Count	Type	Full Name
1	SO4	12	Ligand/Ion	SULFATE ION

Asymmetric Unit (6, 6)

No.	Name	Evidence	Residues	Description
1	AC1	SOFTWARE	THR D:80 , LYS D:81 , LYS D:103 , HOH D:124	BINDING SITE FOR RESIDUE SO4 D 114
2	AC2	SOFTWARE	THR E:80 , LYS E:81 , LYS E:103	BINDING SITE FOR RESIDUE SO4 E 114
3	AC3	SOFTWARE	GLU F:79 , THR F:80 , LYS F:81 , LYS F:103 , HOH F:141	BINDING SITE FOR RESIDUE SO4 F 114
4	AC4	SOFTWARE	THR G:80 , LYS G:81 , LYS G:103	BINDING SITE FOR RESIDUE SO4 G 114
5	AC5	SOFTWARE	THR H:80 , LYS H:81 , LYS H:103 , HOH H:120	BINDING SITE FOR RESIDUE SO4 H 114
6	AC6	SOFTWARE	HIS D:13 , ASN D:14 , LYS E:84	BINDING SITE FOR RESIDUE SO4 E 115

Asymmetric Unit

No.	Residues
1	D:9	-	D:86
2	E:9	-	E:86
3	F:9	-	F:86
4	G:9	-	G:86
5	H:9	-	H:86

Asymmetric Unit

No.	Residues
1	Thr D:92	-	Pro D:93
2	Thr E:92	-	Pro E:93
3	Thr F:92	-	Pro F:93
4	Thr G:92	-	Pro G:93
5	Thr H:92	-	Pro H:93

Asymmetric Unit (2, 10)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
1	UniProt	VAR_ELBH_ECOLX_001 *	H	34	R	ELBH_ECOLX	---	---	D/E/F/G/H	H	13	R
2	UniProt	VAR_ELBH_ECOLX_002 *	T	96	A	ELBH_ECOLX	---	---	D/E/F/G/H	T	75	A
	* ID not provided by source

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

Biological Unit 1 (2, 10)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
1	UniProt	VAR_ELBH_ECOLX_001 *	H	34	R	ELBH_ECOLX	---	---	D/E/F/G/H	H	13	R
2	UniProt	VAR_ELBH_ECOLX_002 *	T	96	A	ELBH_ECOLX	---	---	D/E/F/G/H	T	75	A
	* ID not provided by source

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

Biological Unit 2 (2, 20)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
1	UniProt	VAR_ELBH_ECOLX_001 *	H	34	R	ELBH_ECOLX	---	---	D/E/F/G/H	H	13	R
2	UniProt	VAR_ELBH_ECOLX_002 *	T	96	A	ELBH_ECOLX	---	---	D/E/F/G/H	T	75	A
	* ID not provided by source

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

(no "PROSITE Motif" information available for 1LTR)

(no "Exon" information available for 1LTR)

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain D from PDB  Type:PROTEIN  Length:108
 aligned with ELBH_ECOH1 | D0Z6T1 from UniProtKB/Swiss-Prot  Length:124

    Alignment length:108
                                                                                                                                124     
                                    31        41        51        61        71        81        91       101       111       121  |     
           ELBH_ECOH1    22 APQSITELCSEYRNTQIYTINDKILSYTESMAGKREMVIITFKSGATFQVEVPGSQHIDSQKKAIERMKDTLRITYLTETKIDKLCVWNNKTPNSIAAISMEN-----   -
               SCOP domains d1ltrd_ D: Heat-labile toxin                                                                                 SCOP domains
               CATH domains 1ltrD00 D:1-108  [code=2.40.50.110, no name defined]                                                         CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ....hhhhhhh...eeeee......eeee........eeee.....eeee.........hhhhhhhhhhhhhhhhhh......eeeee......eeeeee........ Sec.struct. author
                 SAPs(SNPs) ------------R-------------------------------------------------------------A--------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------ Transcript
                 1ltr D   1 APQSITELCSEYHNTQIYTINDKILSYTESMAGKREMVIITFKSGATFQVEVPGSQHIDSQKKAIERMKDTLRITYLTETKIDKLCVWNNKTPNSIAAISMEKLYAGA 108
                                    10        20        30        40        50        60        70        80        90       100

Chain D from PDB  Type:PROTEIN  Length:108
 aligned with ELBH_ECOLX | P0CK94 from UniProtKB/Swiss-Prot  Length:124

    Alignment length:108
                                                                                                                                124     
                                    31        41        51        61        71        81        91       101       111       121  |     
           ELBH_ECOLX    22 APQSITELCSEYHNTQIYTINDKILSYTESMAGKREMVIITFKSGATFQVEVPGSQHIDSQKKAIERMKDTLRITYLTETKIDKLCVWNNKTPNSIAAISMEN-----   -
               SCOP domains d1ltrd_ D: Heat-labile toxin                                                                                 SCOP domains
               CATH domains 1ltrD00 D:1-108  [code=2.40.50.110, no name defined]                                                         CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ....hhhhhhh...eeeee......eeee........eeee.....eeee.........hhhhhhhhhhhhhhhhhh......eeeee......eeeeee........ Sec.struct. author
                 SAPs(SNPs) ------------R-------------------------------------------------------------A--------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------ Transcript
                 1ltr D   1 APQSITELCSEYHNTQIYTINDKILSYTESMAGKREMVIITFKSGATFQVEVPGSQHIDSQKKAIERMKDTLRITYLTETKIDKLCVWNNKTPNSIAAISMEKLYAGA 108
                                    10        20        30        40        50        60        70        80        90       100

Chain E from PDB  Type:PROTEIN  Length:105
 aligned with ELBH_ECOH1 | D0Z6T1 from UniProtKB/Swiss-Prot  Length:124

    Alignment length:105
                                                                                                                                124  
                                    31        41        51        61        71        81        91       101       111       121  |  
           ELBH_ECOH1    22 APQSITELCSEYRNTQIYTINDKILSYTESMAGKREMVIITFKSGATFQVEVPGSQHIDSQKKAIERMKDTLRITYLTETKIDKLCVWNNKTPNSIAAISMEN--   -
               SCOP domains d1ltre_ E: Heat-labile toxin                                                                              SCOP domains
               CATH domains 1ltrE00 E:1-105  [code=2.40.50.110, no name defined]                                                      CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhh...eeeee......eeee........eeee.....eeee..........hhhhhhhhhhhhhhhhh......eeeee......eeeeee..... Sec.struct. author
                 SAPs(SNPs) ------------R-------------------------------------------------------------A------------------------------ SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------- Transcript
                 1ltr E   1 APQSITELCSEYHNTQIYTINDKILSYTESMAGKREMVIITFKSGATFQVEVPGSQHIDSQKKAIERMKDTLRITYLTETKIDKLCVWNNKTPNSIAAISMEKLY 105
                                    10        20        30        40        50        60        70        80        90       100

Chain E from PDB  Type:PROTEIN  Length:105
 aligned with ELBH_ECOLX | P0CK94 from UniProtKB/Swiss-Prot  Length:124

    Alignment length:105
                                                                                                                                124  
                                    31        41        51        61        71        81        91       101       111       121  |  
           ELBH_ECOLX    22 APQSITELCSEYHNTQIYTINDKILSYTESMAGKREMVIITFKSGATFQVEVPGSQHIDSQKKAIERMKDTLRITYLTETKIDKLCVWNNKTPNSIAAISMEN--   -
               SCOP domains d1ltre_ E: Heat-labile toxin                                                                              SCOP domains
               CATH domains 1ltrE00 E:1-105  [code=2.40.50.110, no name defined]                                                      CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhh...eeeee......eeee........eeee.....eeee..........hhhhhhhhhhhhhhhhh......eeeee......eeeeee..... Sec.struct. author
                 SAPs(SNPs) ------------R-------------------------------------------------------------A------------------------------ SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------- Transcript
                 1ltr E   1 APQSITELCSEYHNTQIYTINDKILSYTESMAGKREMVIITFKSGATFQVEVPGSQHIDSQKKAIERMKDTLRITYLTETKIDKLCVWNNKTPNSIAAISMEKLY 105
                                    10        20        30        40        50        60        70        80        90       100

Chain F from PDB  Type:PROTEIN  Length:109
 aligned with ELBH_ECOH1 | D0Z6T1 from UniProtKB/Swiss-Prot  Length:124

    Alignment length:109
                                                                                                                                124      
                                    31        41        51        61        71        81        91       101       111       121  |      
           ELBH_ECOH1    22 APQSITELCSEYRNTQIYTINDKILSYTESMAGKREMVIITFKSGATFQVEVPGSQHIDSQKKAIERMKDTLRITYLTETKIDKLCVWNNKTPNSIAAISMEN------   -
               SCOP domains d1ltrf_ F: Heat-labile toxin                                                                                  SCOP domains
               CATH domains 1ltrF00 F:1-109  [code=2.40.50.110, no name defined]                                                          CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhh...eeeee......eeeee......eeeee.....eeee..........hhhhhhhhhhhhhhhhh......eeeee......eeeeee......... Sec.struct. author
                 SAPs(SNPs) ------------R-------------------------------------------------------------A---------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------- Transcript
                 1ltr F   1 APQSITELCSEYHNTQIYTINDKILSYTESMAGKREMVIITFKSGATFQVEVPGSQHIDSQKKAIERMKDTLRITYLTETKIDKLCVWNNKTPNSIAAISMEKLYAGAV 109
                                    10        20        30        40        50        60        70        80        90       100

Chain F from PDB  Type:PROTEIN  Length:109
 aligned with ELBH_ECOLX | P0CK94 from UniProtKB/Swiss-Prot  Length:124

    Alignment length:109
                                                                                                                                124      
                                    31        41        51        61        71        81        91       101       111       121  |      
           ELBH_ECOLX    22 APQSITELCSEYHNTQIYTINDKILSYTESMAGKREMVIITFKSGATFQVEVPGSQHIDSQKKAIERMKDTLRITYLTETKIDKLCVWNNKTPNSIAAISMEN------   -
               SCOP domains d1ltrf_ F: Heat-labile toxin                                                                                  SCOP domains
               CATH domains 1ltrF00 F:1-109  [code=2.40.50.110, no name defined]                                                          CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhh...eeeee......eeeee......eeeee.....eeee..........hhhhhhhhhhhhhhhhh......eeeee......eeeeee......... Sec.struct. author
                 SAPs(SNPs) ------------R-------------------------------------------------------------A---------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------- Transcript
                 1ltr F   1 APQSITELCSEYHNTQIYTINDKILSYTESMAGKREMVIITFKSGATFQVEVPGSQHIDSQKKAIERMKDTLRITYLTETKIDKLCVWNNKTPNSIAAISMEKLYAGAV 109
                                    10        20        30        40        50        60        70        80        90       100

Chain G from PDB  Type:PROTEIN  Length:105
 aligned with ELBH_ECOH1 | D0Z6T1 from UniProtKB/Swiss-Prot  Length:124

    Alignment length:105
                                                                                                                                124  
                                    31        41        51        61        71        81        91       101       111       121  |  
           ELBH_ECOH1    22 APQSITELCSEYRNTQIYTINDKILSYTESMAGKREMVIITFKSGATFQVEVPGSQHIDSQKKAIERMKDTLRITYLTETKIDKLCVWNNKTPNSIAAISMEN--   -
               SCOP domains d1ltrg_ G: Heat-labile toxin                                                                              SCOP domains
               CATH domains 1ltrG00 G:1-105  [code=2.40.50.110, no name defined]                                                      CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhh...eeeee......eeee........eeee.....eeee..........hhhhhhhhhhhhhhhhh......eeeee......eeeeee..... Sec.struct. author
                 SAPs(SNPs) ------------R-------------------------------------------------------------A------------------------------ SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------- Transcript
                 1ltr G   1 APQSITELCSEYHNTQIYTINDKILSYTESMAGKREMVIITFKSGATFQVEVPGSQHIDSQKKAIERMKDTLRITYLTETKIDKLCVWNNKTPNSIAAISMEKLY 105
                                    10        20        30        40        50        60        70        80        90       100

Chain G from PDB  Type:PROTEIN  Length:105
 aligned with ELBH_ECOLX | P0CK94 from UniProtKB/Swiss-Prot  Length:124

    Alignment length:105
                                                                                                                                124  
                                    31        41        51        61        71        81        91       101       111       121  |  
           ELBH_ECOLX    22 APQSITELCSEYHNTQIYTINDKILSYTESMAGKREMVIITFKSGATFQVEVPGSQHIDSQKKAIERMKDTLRITYLTETKIDKLCVWNNKTPNSIAAISMEN--   -
               SCOP domains d1ltrg_ G: Heat-labile toxin                                                                              SCOP domains
               CATH domains 1ltrG00 G:1-105  [code=2.40.50.110, no name defined]                                                      CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhh...eeeee......eeee........eeee.....eeee..........hhhhhhhhhhhhhhhhh......eeeee......eeeeee..... Sec.struct. author
                 SAPs(SNPs) ------------R-------------------------------------------------------------A------------------------------ SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------- Transcript
                 1ltr G   1 APQSITELCSEYHNTQIYTINDKILSYTESMAGKREMVIITFKSGATFQVEVPGSQHIDSQKKAIERMKDTLRITYLTETKIDKLCVWNNKTPNSIAAISMEKLY 105
                                    10        20        30        40        50        60        70        80        90       100

Chain H from PDB  Type:PROTEIN  Length:105
 aligned with ELBH_ECOH1 | D0Z6T1 from UniProtKB/Swiss-Prot  Length:124

    Alignment length:105
                                                                                                                                124  
                                    31        41        51        61        71        81        91       101       111       121  |  
           ELBH_ECOH1    22 APQSITELCSEYRNTQIYTINDKILSYTESMAGKREMVIITFKSGATFQVEVPGSQHIDSQKKAIERMKDTLRITYLTETKIDKLCVWNNKTPNSIAAISMEN--   -
               SCOP domains d1ltrh_ H: Heat-labile toxin                                                                              SCOP domains
               CATH domains 1ltrH00 H:1-105  [code=2.40.50.110, no name defined]                                                      CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhh...eeeee......eeee........eeee.....eeee........hhhhhhhhhhhhhhhhhhh......eeeee......eeeeee..... Sec.struct. author
                 SAPs(SNPs) ------------R-------------------------------------------------------------A------------------------------ SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------- Transcript
                 1ltr H   1 APQSITELCSEYHNTQIYTINDKILSYTESMAGKREMVIITFKSGATFQVEVPGSQHIDSQKKAIERMKDTLRITYLTETKIDKLCVWNNKTPNSIAAISMEKLY 105
                                    10        20        30        40        50        60        70        80        90       100

Chain H from PDB  Type:PROTEIN  Length:105
 aligned with ELBH_ECOLX | P0CK94 from UniProtKB/Swiss-Prot  Length:124

    Alignment length:105
                                                                                                                                124  
                                    31        41        51        61        71        81        91       101       111       121  |  
           ELBH_ECOLX    22 APQSITELCSEYHNTQIYTINDKILSYTESMAGKREMVIITFKSGATFQVEVPGSQHIDSQKKAIERMKDTLRITYLTETKIDKLCVWNNKTPNSIAAISMEN--   -
               SCOP domains d1ltrh_ H: Heat-labile toxin                                                                              SCOP domains
               CATH domains 1ltrH00 H:1-105  [code=2.40.50.110, no name defined]                                                      CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhh...eeeee......eeee........eeee.....eeee........hhhhhhhhhhhhhhhhhhh......eeeee......eeeeee..... Sec.struct. author
                 SAPs(SNPs) ------------R-------------------------------------------------------------A------------------------------ SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------- Transcript
                 1ltr H   1 APQSITELCSEYHNTQIYTINDKILSYTESMAGKREMVIITFKSGATFQVEVPGSQHIDSQKKAIERMKDTLRITYLTETKIDKLCVWNNKTPNSIAAISMEKLY 105
                                    10        20        30        40        50        60        70        80        90       100

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric Unit

Classes(

)

Folds(

)

Superfamilies( (-)

)

Families(

)

Protein Domains( (-)

)

Organisms( (-)

)

Class: All beta proteins (24004)

Fold: OB-fold (1179)

Superfamily: Bacterial enterotoxins (188)

Family: Bacterial AB5 toxins, B-subunits (85)

Protein domain: Heat-labile toxin (24)

Escherichia coli, type IB [TaxId: 562] (21)

1a	d1ltrd_	D:
1b	d1ltre_	E:
1c	d1ltrf_	F:
1d	d1ltrg_	G:
1e	d1ltrh_	H:

Asymmetric Unit

Classes(

)

Architectures( (-)

)

Topologies( (-)

)

Homologous Superfamilies( (-)

)

Organisms( (-)

)

Class: Mainly Beta (13760)

Architecture: Beta Barrel (4804)

Topology: OB fold (Dihydrolipoamide Acetyltransferase, E2P) (1040)

Homologous Superfamily: [code=2.40.50.110, no name defined] (136)

Escherichia coli. Organism_taxid: 562. (6)

1a	1ltrE00	E:1-105
1b	1ltrG00	G:1-105
1c	1ltrH00	H:1-105
1d	1ltrD00	D:1-108
1e	1ltrF00	F:1-109

(no "Pfam Domain" information available for 1LTR)

Asymmetric Unit(hide GO term definitions)

Chain D,E,F,G,H (ELBH_ECOH1 | D0Z6T1)

biological process
	GO:0009405	pathogenesis	The set of specific processes that generate the ability of an organism to induce an abnormal, generally detrimental state in another organism.
cellular component
	GO:0005576	extracellular region	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.

Chain D,E,F,G,H (ELBH_ECOLX | P0CK94)

biological process
	GO:0009405	pathogenesis	The set of specific processes that generate the ability of an organism to induce an abnormal, generally detrimental state in another organism.
cellular component
	GO:0005576	extracellular region	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.

Asymmetric Unit
	Complete Structure
		Jena3D(integrated viewing of ligand, site, SAP, PROSITE, SCOP information)
		WebMol \| AstexViewer[tm]@PDBe (Java Applets, require no local installation except for Java; loading may be slow)
		STRAP (Java WebStart application, automatic local installation, requires Java; full application with system access!)
		RasMol (require local installation)
		Molscript (VRML) (requires installation of a VRML viewer; select preferred view via VRML and generate a mono or stereo PDF format file)

	Ligands, Modified Residues, Ions
		SO4	[ RasMol \| Jena3D ]	+environment [ RasMol \| Jena3D ]

	Sites
		AC1	[ RasMol ]	+environment [ RasMol ]
		AC2	[ RasMol ]	+environment [ RasMol ]
		AC3	[ RasMol ]	+environment [ RasMol ]
		AC4	[ RasMol ]	+environment [ RasMol ]
		AC5	[ RasMol ]	+environment [ RasMol ]
		AC6	[ RasMol ]	+environment [ RasMol ]

	Cis Peptide Bonds
		Thr D:92 - Pro D:93	[ RasMol ]
		Thr E:92 - Pro E:93	[ RasMol ]
		Thr F:92 - Pro F:93	[ RasMol ]
		Thr G:92 - Pro G:93	[ RasMol ]
		Thr H:92 - Pro H:93	[ RasMol ]

Biological Units
	Complete Structure
		Biological Unit 1	[ Jena3D ]
		Biological Unit 2	[ Jena3D ]

Jmol
	protein: cartoon or spacefill or dots and stick; nucleic acid: cartoon and stick; ligands: spacefill; active site: stick [ Asym. Unit PNG format \| Asym. Unit - sites PNG format \| Biol. Unit 1 PNG format \| Biol. Unit 1 - sites PNG format \| Biol. Unit 2 PNG format ](automatic orientation, automatically generated)
Molscript
	protein, nucleic acid: cartoon; ligands: spacefill; active site: ball and stick [ mono PDF format \| stereo PDF format ](default orientation, automatically generated)

Access by PDB/NDB ID
	1ltr
		Family and Domain Information	:	ProDom \| SYSTERS
		General Structural Information	:	GlycoscienceDB \| MMDB \| NDB \| OCA \| PDB \| PDBe \| PDBj \| PDBsum \| PDBWiki \| PQS \| PROTEOPEDIA
		Orientation in Membranes	:	OPM
		Protein Surface	:	SURFACE
		Secondary Structure	:	DSSP (structure derived) \| HSSP (homology derived)
		Structural Genomics	:	GeneCensus
		Structural Neighbours	:	CE \| VAST
		Structure Classification	:	CATH \| Dali \| SCOP
		Validation and Original Data	:	BMRB Data View \| BMRB Restraints Grid \| EDS \| PROCHECK \| RECOORD \| WHAT_CHECK

Access by UniProt ID/Accession number
	ELBH_ECOH1 \| D0Z6T1
		Comparative Protein Structure Models	:	ModBase
		Genomic Information	:	Ensembl
		Protein-protein Interaction	:	DIP
		Sequence, Family and Domain Information	:	InterPro \| Pfam \| SMART \| UniProtKB/SwissProt
	ELBH_ECOLX \| P0CK94
		Comparative Protein Structure Models	:	ModBase
		Genomic Information	:	Ensembl
		Protein-protein Interaction	:	DIP
		Sequence, Family and Domain Information	:	InterPro \| Pfam \| SMART \| UniProtKB/SwissProt

Access by Enzyme Classificator (EC Number)
	(no 'Enzyme Classificator' available)
		General Enzyme Information	:	BRENDA \| EC-PDB \| Enzyme \| IntEnz
		Pathway	:	KEGG \| MetaCyc

Access by Disease Identifier (MIM ID)
	(no 'MIM ID' available)
		Disease Information	:	OMIM

Access by GenAge ID
	(no 'GenAge ID' available)
		Age Related Information	:	GenAge

Access by PDB/NDB ID
		Domain Information	:	XDom
		Interatomic Contacts of Structural Units	:	CSU
		Ligand-protein Contacts	:	LPC
		Protein Cavities	:	castP
		Sequence and Secondary Structure	:	PDBCartoon
		Structure Alignment	:	STRAP(Java WebStart application, automatic local installation, requires Java; full application with system access!)
		Structure and Sequence Browser	:	STING

Access by UniProt ID/Accession number
	ELBH_ECOH1 \| D0Z6T1
		Protein Disorder Prediction	:	DisEMBL \| FoldIndex \| GLOBPLOT (for more information see DisProt)
	ELBH_ECOLX \| P0CK94
		Protein Disorder Prediction	:	DisEMBL \| FoldIndex \| GLOBPLOT (for more information see DisProt)

UniProtKB/Swiss-Prot
	ELBH_ECOH1 \| D0Z6T1	:	1b44 2o2l
	ELBH_ECOLX \| P0CK94	:	1b44 2o2l 3efx

(no "Related Entries Specified in the PDB File" available for 1LTR)

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (1, 6)

Sites (6, 6)

SS Bonds (5, 5)

Cis Peptide Bonds (5, 5)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (2, 10)

PROSITE Motifs (0, 0)

Exons (0, 0)

Sequences/Alignments

Classification and Annotation

SCOP Domains (1, 5)

CATH Domains (1, 5)

Pfam Domains (0, 0)

Gene Ontology (2, 4)

Visualization

Interactive Views

Still Images

Databases and Analysis Tools

Databases

Analysis Tools

Related Entries

Entries Sharing at Least One Protein Chain (UniProt ID)

Related Entries Specified in the PDB File