Show PDB file:   
         Plain Text   HTML   (compressed file size)
QuickSearch:   
by PDB,NDB,UniProt,PROSITE Code or Search Term(s)  
(-)Asym./Biol. Unit - manually
(-)Asym./Biol. Unit
(-)Asym./Biol. Unit - sites
collapse expand < >
Image Asym./Biol. Unit - manually
Asym./Biol. Unit - manually  (Jmol Viewer)
Image Asym./Biol. Unit
Asym./Biol. Unit  (Jmol Viewer)
Image Asym./Biol. Unit - sites
Asym./Biol. Unit - sites  (Jmol Viewer)

(-) Description

Title :  THE X-RAY CRYSTAL STRUCTURE OF CEL9G COMPLEXED WITH CELLOTRIOSE
 
Authors :  D. Mandelman, A. Belaich, J. P. Belaich, N. Aghajari, H. Driguez, R. Has
Date :  18 Oct 01  (Deposition) - 15 Jul 03  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.80
Chains :  Asym./Biol. Unit :  A,B
Keywords :  Endoglucanase, Family 9, Cellotriose, Cellulose Binding Domain, (Alpha-Alpha)6-Barrel, Hydrolase (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  D. Mandelman, A. Belaich, J. P. Belaich, N. Aghajari, H. Driguez, R. Haser
X-Ray Crystal Structure Of The Multidomain Endoglucanase Cel9G From Clostridium Cellulolyticum Complexed With Natura And Synthetic Cello-Oligosaccharides
J. Bacteriol. V. 185 4127 2003
PubMed-ID: 12837787  |  Reference-DOI: 10.1128/JB.185.14.4127-4135.2003

(-) Compounds

Molecule 1 - ENDOGLUCANASE 9G
    ChainsA, B
    EC Number3.2.1.4
    EngineeredYES
    Expression SystemESCHERICHIA COLI BL21
    Expression System PlasmidPET-22B
    Expression System StrainBL21
    Expression System Taxid511693
    Expression System Vector TypePGEX-5X-2
    GeneCELCCG
    Organism ScientificCLOSTRIDIUM CELLULOLYTICUM
    Organism Taxid1521

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (6, 14)

Asymmetric/Biological Unit (6, 14)
No.NameCountTypeFull Name
1CA4Ligand/IonCALCIUM ION
2CBI1Ligand/IonCELLOBIOSE
3GLC1Ligand/IonALPHA-D-GLUCOSE
4GOL2Ligand/IonGLYCEROL
5MG4Ligand/IonMAGNESIUM ION
6SCH2Mod. Amino AcidS-METHYL-THIO-CYSTEINE

(-) Sites  (12, 12)

Asymmetric Unit (12, 12)
No.NameEvidenceResiduesDescription
01AC1SOFTWARESER A:126 , TRP A:128 , ASP A:383 , GLN A:384 , MET A:385 , THR A:386 , CBI A:777 , HOH A:881 , HOH A:1069 , LYS B:476 , TYR B:520 , GLU B:563 , GLN B:565 , HOH B:917BINDING SITE FOR RESIDUE GLC A 615
02AC2SOFTWARETRP A:128 , HIS A:373 , ARG A:375 , MET A:385 , TYR A:416 , GLU A:420 , GLC A:615 , MG A:782 , HOH A:817 , HOH A:881 , HOH A:1120 , HOH A:1121 , HOH A:1139 , GLU B:522 , SER B:558 , ARG B:561 , HOH B:941 , HOH B:989BINDING SITE FOR RESIDUE CBI A 777
03AC3SOFTWAREASP B:500 , GLU B:503 , ASN B:578 , ASN B:581 , ASP B:582 , HOH B:701BINDING SITE FOR RESIDUE CA B 615
04AC4SOFTWAREASP A:500 , GLU A:503 , ASN A:578 , ASN A:581 , ASP A:582 , HOH A:803BINDING SITE FOR RESIDUE CA A 778
05AC5SOFTWARESER B:209 , ASP B:212 , ASP B:213 , ASP B:259 , HOH B:657 , HOH B:976BINDING SITE FOR RESIDUE CA B 616
06AC6SOFTWARESER A:209 , ASP A:212 , ASP A:213 , ASP A:259 , HOH A:785 , HOH A:1140BINDING SITE FOR RESIDUE CA A 779
07AC7SOFTWAREASP A:24 , HOH A:816 , HOH A:1117 , HOH A:1123 , HOH A:1124BINDING SITE FOR RESIDUE MG A 780
08AC8SOFTWAREASP B:24 , HOH B:727 , HOH B:741 , HOH B:910 , HOH B:978 , HOH B:979BINDING SITE FOR RESIDUE MG B 617
09AC9SOFTWAREASP A:500 , HOH A:886 , HOH A:1005 , HOH A:1030 , HOH A:1119BINDING SITE FOR RESIDUE MG A 781
10BC1SOFTWARECBI A:777 , HOH A:787 , HOH A:817 , HOH A:1010 , HOH A:1120 , HOH A:1121BINDING SITE FOR RESIDUE MG A 782
11BC2SOFTWAREASP A:195 , TYR A:198 , SER A:206 , SER A:207 , HOH A:810 , HOH A:1133 , HIS B:125BINDING SITE FOR RESIDUE GOL A 783
12BC3SOFTWARETHR A:110 , HOH A:964 , GLY B:23 , ASP B:24 , THR B:50 , LYS B:106 , HOH B:903BINDING SITE FOR RESIDUE GOL B 618

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1K72)

(-) Cis Peptide Bonds  (4, 4)

Asymmetric/Biological Unit
No.Residues
1Ser A:387 -Pro A:388
2Trp A:485 -Pro A:486
3Ser B:387 -Pro B:388
4Trp B:485 -Pro B:486

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1K72)

(-) PROSITE Motifs  (3, 6)

Asymmetric/Biological Unit (3, 6)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1GLYCOSYL_HYDROL_F9_1PS00592 Glycosyl hydrolases family 9 active sites signature 1.GUNG_CLOCE394-410
 
  2A:359-375
B:359-375
2GLYCOSYL_HYDROL_F9_2PS00698 Glycosyl hydrolases family 9 active sites signature 2.GUNG_CLOCE444-462
 
  2A:409-427
B:409-427
3CBM3PS51172 CBM3 (carbohydrate binding type-3) domain profile.GUNG_CLOCE489-650
 
  2A:454-614
B:454-614

(-) Exons   (0, 0)

(no "Exon" information available for 1K72)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:612
 aligned with GUNG_CLOCE | P37700 from UniProtKB/Swiss-Prot  Length:725

    Alignment length:612
                                    47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487       497       507       517       527       537       547       557       567       577       587       597       607       617       627       637       647  
           GUNG_CLOCE    38 TYNYGEALQKSIMFYEFQRSGDLPADKRDNWRDDSGMKDGSDVGVDLTGGWYDAGDHVKFNLPMSYTSAMLAWSLYEDKDAYDKSGQTKYIMDGIKWANDYFIKCNPTPGVYYYQVGDGGKDHSWWGPAEVMQMERPSFKVDASKPGSAVCASTAASLASAAVVFKSSDPTYAEKCISHAKNLFDMADKAKSDAGYTAASGYYSSSSFYDDLSWAAVWLYLATNDSTYLDKAESYVPNWGKEQQTDIIAYKWGQCWDDVHYGAELLLAKLTNKQLYKDSIEMNLDFWTTGVNGTRVSYTPKGLAWLFQWGSLRHATTQAFLAGVYAEWEGCTPSKVSVYKDFLKSQIDYALGSTGRSFVVGYGVNPPQHPHHRTAHGSWTDQMTSPTYHRHTIYGALVGGPDNADGYTDEINNYVNNEIACDYNAGFTGALAKMYKHSGGDPIPNFKAIEKITNDEVIIKAGLNSTGPNYTEIKAVVYNQTGWPARVTDKISFKYFMDLSEIVAAGIDPLSLVTSSNYSEGKNTKVSGVLPWDVSNNVYYVNVDLTGENIYPGGQSACRREVQFRIAAPQGTTYWNPKNDFSYDGLPTTSTVNTVTNIPVYDNGVKVFGNEP 649
               SCOP domains d1k72a1 A:3-456 Endo/exocellulase:cellobiose E-4, N-terminal domain                                                                                                                                                                                                                                                                                                                                                                                                   d1k72a2 A:457-614 Endo/exocellulase:cellobiose E-4, C-terminal domain                                                                                          SCOP domains
               CATH domains 1k72A01 A:3-450  [code=1.50.10.10, no name defined]                                                                                                                                                                                                                                                                                                                                                                                                             ---1k72A02 A:454-613  [code=2.60.40.710, no name defined]                                                                                                          - CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhhhh......................hhhhh..............eehhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhh......eeeee.hhhhhhh...hhhhh.....eeee.....hhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhh................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh........ee.....ee....hhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhh...................hhhhhh...................................hhhhhh.hhhhhhhhhhhhhhhhhhhh.................eeeeeeeeeee..eeeeeeeeee...........eeeeeeeehhhhhhh..hhhhheeeeeee.....ee...eeeehhh.eeeeeee..............eeeeeeeee........hhhhhhhhh........ee.....eee..eeee.... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GLYCOSYL_HYDROL_F---------------------------------GLYCOSYL_HYDROL_F9_--------------------------CBM3  PDB: A:454-614 UniProt: 489-650                                                                                                                             PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 1k72 A   3 TYNYGEALQKSIMFYEFQRSGDLPADKRDNWRDDSGMKDGSDVGVDLTGGWYDAGDHVKFNLPMSYTSAMLAWSLYEDKDAYDKSGQTKYIMDGIKWANDYFIKCNPTPGVYYYQVGDGGKDHSWWGPAEVMQMERPSFKVDASKPGSAVCASTAASLASAAVVFKSSDPTYAEKCISHAKNLFDMADKAKSDAGYTAASGYYSSSSFYDDLSWAAVWLYLATNDSTYLDKAESYVPNWGKEQQTDIIAYKWGQcWDDVHYGAELLLAKLTNKQLYKDSIEMNLDFWTTGVNGTRVSYTPKGLAWLFQWGSLRHATTQAFLAGVYAEWEGCTPSKVSVYKDFLKSQIDYALGSTGRSFVVGYGVNPPQHPHHRTAHGSWTDQMTSPTYHRHTIYGALVGGPDNADGYTDEINNYVNNEIACDYNAGFTGALAKMYKHSGGDPIPNFKAIEKITNDEVIIKAGLNSTGPNYTEIKAVVYNQTGWPARVTDKISFKYFMDLSEIVAAGIDPLSLVTSSNYSEGKNTKVSGVLPWDVSNNVYYVNVDLTGENIYPGGQSACRREVQFRIAAPQGTTYWNPKNDFSYDGLPTTSTVNTVTNIPVYDNGVKVFGNEP 614
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252    |  262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482       492       502       512       522       532       542       552       562       572       582       592       602       612  
                                                                                                                                                                                                                                                                                        257-SCH                                                                                                                                                                                                                                                                                                                                                                 

Chain B from PDB  Type:PROTEIN  Length:613
 aligned with GUNG_CLOCE | P37700 from UniProtKB/Swiss-Prot  Length:725

    Alignment length:613
                                    46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       386       396       406       416       426       436       446       456       466       476       486       496       506       516       526       536       546       556       566       576       586       596       606       616       626       636       646   
           GUNG_CLOCE    37 GTYNYGEALQKSIMFYEFQRSGDLPADKRDNWRDDSGMKDGSDVGVDLTGGWYDAGDHVKFNLPMSYTSAMLAWSLYEDKDAYDKSGQTKYIMDGIKWANDYFIKCNPTPGVYYYQVGDGGKDHSWWGPAEVMQMERPSFKVDASKPGSAVCASTAASLASAAVVFKSSDPTYAEKCISHAKNLFDMADKAKSDAGYTAASGYYSSSSFYDDLSWAAVWLYLATNDSTYLDKAESYVPNWGKEQQTDIIAYKWGQCWDDVHYGAELLLAKLTNKQLYKDSIEMNLDFWTTGVNGTRVSYTPKGLAWLFQWGSLRHATTQAFLAGVYAEWEGCTPSKVSVYKDFLKSQIDYALGSTGRSFVVGYGVNPPQHPHHRTAHGSWTDQMTSPTYHRHTIYGALVGGPDNADGYTDEINNYVNNEIACDYNAGFTGALAKMYKHSGGDPIPNFKAIEKITNDEVIIKAGLNSTGPNYTEIKAVVYNQTGWPARVTDKISFKYFMDLSEIVAAGIDPLSLVTSSNYSEGKNTKVSGVLPWDVSNNVYYVNVDLTGENIYPGGQSACRREVQFRIAAPQGTTYWNPKNDFSYDGLPTTSTVNTVTNIPVYDNGVKVFGNEP 649
               SCOP domains d1k72b1 B:2-456 Endo/exocellulase:cellobiose E-4, N-terminal domain                                                                                                                                                                                                                                                                                                                                                                                                    d1k72b2 B:457-614 Endo/exocellulase:cellobiose E-4, C-terminal domain                                                                                          SCOP domains
               CATH domains 1k72B01 B:2-450  [code=1.50.10.10, no name defined]                                                                                                                                                                                                                                                                                                                                                                                                              ---1k72B02 B:454-613  [code=2.60.40.710, no name defined]                                                                                                          - CATH domains
           Pfam domains (1) ---Glyco_hydro_9-1k72B01 B:5-434                                                                                                                                                                                                                                                                                                                                                                                                                 ------------------------CBM_3-1k72B03 B:459-546                                                                 -------------------------------------------------------------------- Pfam domains (1)
           Pfam domains (2) ---Glyco_hydro_9-1k72B02 B:5-434                                                                                                                                                                                                                                                                                                                                                                                                                 ------------------------CBM_3-1k72B04 B:459-546                                                                 -------------------------------------------------------------------- Pfam domains (2)
         Sec.struct. author ...hhhhhhhhhhhhhhhh........................................eehhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhh......eeeee.hhhhhhh...hhhhh.....eeee.....hhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhh................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh........ee.....ee....hhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhh...................hhhhhh..........................................hhhhhhhhhhhhhhhhhhhh.................eeeeeeeeeee..eeeeeeeeee...........eeeeeeeehhhhhhh..hhhhheeeeeee.....ee...eeeehhh.eeeeeee..............eeeeeeeee........hhhhhhhhh........ee.....eee..eeee.... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GLYCOSYL_HYDROL_F---------------------------------GLYCOSYL_HYDROL_F9_--------------------------CBM3  PDB: B:454-614 UniProt: 489-650                                                                                                                             PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1k72 B   2 GTYNYGEALQKSIMFYEFQRSGDLPADKRDNWRDDSGMKDGSDVGVDLTGGWYDAGDHVKFNLPMSYTSAMLAWSLYEDKDAYDKSGQTKYIMDGIKWANDYFIKCNPTPGVYYYQVGDGGKDHSWWGPAEVMQMERPSFKVDASKPGSAVCASTAASLASAAVVFKSSDPTYAEKCISHAKNLFDMADKAKSDAGYTAASGYYSSSSFYDDLSWAAVWLYLATNDSTYLDKAESYVPNWGKEQQTDIIAYKWGQcWDDVHYGAELLLAKLTNKQLYKDSIEMNLDFWTTGVNGTRVSYTPKGLAWLFQWGSLRHATTQAFLAGVYAEWEGCTPSKVSVYKDFLKSQIDYALGSTGRSFVVGYGVNPPQHPHHRTAHGSWTDQMTSPTYHRHTIYGALVGGPDNADGYTDEINNYVNNEIACDYNAGFTGALAKMYKHSGGDPIPNFKAIEKITNDEVIIKAGLNSTGPNYTEIKAVVYNQTGWPARVTDKISFKYFMDLSEIVAAGIDPLSLVTSSNYSEGKNTKVSGVLPWDVSNNVYYVNVDLTGENIYPGGQSACRREVQFRIAAPQGTTYWNPKNDFSYDGLPTTSTVNTVTNIPVYDNGVKVFGNEP 614
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251     | 261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541       551       561       571       581       591       601       611   
                                                                                                                                                                                                                                                                                         257-SCH                                                                                                                                                                                                                                                                                                                                                                 

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (2, 4)

Asymmetric/Biological Unit

(-) CATH Domains  (2, 4)

Asymmetric/Biological Unit
(-)
Class: Mainly Beta (13760)

(-) Pfam Domains  (2, 4)

Asymmetric/Biological Unit
(-)
Clan: 6_Hairpin (120)
(-)
Clan: CBD (21)

(-) Gene Ontology  (11, 11)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A,B   (GUNG_CLOCE | P37700)
molecular function
    GO:0030246    carbohydrate binding    Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates.
    GO:0003824    catalytic activity    Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
    GO:0008810    cellulase activity    Catalysis of the endohydrolysis of (1->4)-beta-D-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans.
    GO:0030248    cellulose binding    Interacting selectively and non-covalently with cellulose.
    GO:0016787    hydrolase activity    Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
    GO:0016798    hydrolase activity, acting on glycosyl bonds    Catalysis of the hydrolysis of any glycosyl bond.
    GO:0004553    hydrolase activity, hydrolyzing O-glycosyl compounds    Catalysis of the hydrolysis of any O-glycosyl bond.
biological process
    GO:0005975    carbohydrate metabolic process    The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
    GO:0030245    cellulose catabolic process    The chemical reactions and pathways resulting in the breakdown of cellulose, a linear beta1-4 glucan of molecular mass 50-400 kDa with the pyranose units in the -4C1 conformation.
    GO:0008152    metabolic process    The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
    GO:0000272    polysaccharide catabolic process    The chemical reactions and pathways resulting in the breakdown of a polysaccharide, a polymer of many (typically more than 10) monosaccharide residues linked glycosidically.

 Visualization

(-) Interactive Views

Asymmetric/Biological Unit
  Complete Structure
    Jena3D(integrated viewing of ligand, site, SAP, PROSITE, SCOP information)
    WebMol | AstexViewer[tm]@PDBe
(Java Applets, require no local installation except for Java; loading may be slow)
    STRAP
(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    RasMol
(require local installation)
    Molscript (VRML)
(requires installation of a VRML viewer; select preferred view via VRML and generate a mono or stereo PDF format file)
 
  Ligands, Modified Residues, Ions
    CA  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    CBI  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    GLC  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    GOL  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    MG  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    SCH  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
 
  Sites
    AC1  [ RasMol ]  +environment [ RasMol ]
    AC2  [ RasMol ]  +environment [ RasMol ]
    AC3  [ RasMol ]  +environment [ RasMol ]
    AC4  [ RasMol ]  +environment [ RasMol ]
    AC5  [ RasMol ]  +environment [ RasMol ]
    AC6  [ RasMol ]  +environment [ RasMol ]
    AC7  [ RasMol ]  +environment [ RasMol ]
    AC8  [ RasMol ]  +environment [ RasMol ]
    AC9  [ RasMol ]  +environment [ RasMol ]
    BC1  [ RasMol ]  +environment [ RasMol ]
    BC2  [ RasMol ]  +environment [ RasMol ]
    BC3  [ RasMol ]  +environment [ RasMol ]
 
  Cis Peptide Bonds
    Ser A:387 - Pro A:388   [ RasMol ]  
    Ser B:387 - Pro B:388   [ RasMol ]  
    Trp A:485 - Pro A:486   [ RasMol ]  
    Trp B:485 - Pro B:486   [ RasMol ]  
 

(-) Still Images

Jmol
  protein: cartoon or spacefill or dots and stick; nucleic acid: cartoon and stick; ligands: spacefill; active site: stick
Molscript
  protein, nucleic acid: cartoon; ligands: spacefill; active site: ball and stick

 Databases and Analysis Tools

(-) Databases

Access by PDB/NDB ID
  1k72
    Family and Domain InformationProDom | SYSTERS
    General Structural InformationGlycoscienceDB | MMDB | NDB | OCA | PDB | PDBe | PDBj | PDBsum | PDBWiki | PQS | PROTEOPEDIA
    Orientation in MembranesOPM
    Protein SurfaceSURFACE
    Secondary StructureDSSP (structure derived) | HSSP (homology derived)
    Structural GenomicsGeneCensus
    Structural NeighboursCE | VAST
    Structure ClassificationCATH | Dali | SCOP
    Validation and Original DataBMRB Data View | BMRB Restraints Grid | EDS | PROCHECK | RECOORD | WHAT_CHECK
 
Access by UniProt ID/Accession number
  GUNG_CLOCE | P37700
    Comparative Protein Structure ModelsModBase
    Genomic InformationEnsembl
    Protein-protein InteractionDIP
    Sequence, Family and Domain InformationInterPro | Pfam | SMART | UniProtKB/SwissProt
 
Access by Enzyme Classificator   (EC Number)
  3.2.1.4
    General Enzyme InformationBRENDA | EC-PDB | Enzyme | IntEnz
    PathwayKEGG | MetaCyc
 
Access by Disease Identifier   (MIM ID)
  (no 'MIM ID' available)
    Disease InformationOMIM
 
Access by GenAge ID
  (no 'GenAge ID' available)
    Age Related InformationGenAge

(-) Analysis Tools

Access by PDB/NDB ID
    Domain InformationXDom
    Interatomic Contacts of Structural UnitsCSU
    Ligand-protein ContactsLPC
    Protein CavitiescastP
    Sequence and Secondary StructurePDBCartoon
    Structure AlignmentSTRAP(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    Structure and Sequence BrowserSTING
 
Access by UniProt ID/Accession number
  GUNG_CLOCE | P37700
    Protein Disorder PredictionDisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)

 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        GUNG_CLOCE | P377001g87 1ga2 1kfg

(-) Related Entries Specified in the PDB File

1g87 NATIVE CRYSTAL STRUCTURE OF CEL9G
1ga2 CRYSTAL STRUCTURE OF CEL9G COMPLEXED WITH CELLOBIOSE