Chain A from PDB Type:PROTEIN Length:398
aligned with DXR_ECOLI | P45568 from UniProtKB/Swiss-Prot Length:398
Alignment length:398
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390
DXR_ECOLI 1 MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEFSPRYAVMDDEASAKLLKTMLQQQGSRTEVLSGQQAACDMAALEDVDQVMAAIVGAAGLLPTLAAIRAGKTILLANKESLVTCGRLFMDAVKQSKAQLLPVDSEHNAIFQSLPQPIQHNLGYADLEQNGVVSILLTGSGGPFRETPLRDLATMTPDQACRHPNWSMGRKISVDSATMMNKGLEYIEARWLFNASASQMEVLIHPQSVIHSMVRYQDGSVLAQLGEPDMRTPIAHTMAWPNRVNSGVKPLDFCKLSALTFAAPDYDRYPCLKLAMEAFEQGQAATTALNAANEITVAAFLAQQIRFTDIAALNLSVLEKMDMREPQCVDDVLSVDANAREVARKEVMRLAS 398
SCOP domains d1k5ha2 A:1-125,A:275-300 1-deoxy-D-xylulose-5-phosphate reductoisomerase d1k5ha3 A:126-274 1-deoxy-D-xylulose-5-phosphate reductoisomerase d1k5ha2 A:1-125,A:275-300 d1k5ha1 A:301-398 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain SCOP domains
CATH domains 1k5hA01 A:1-150 NAD(P)-binding Rossmann-like Domain -----------------------------------------------------------------------------------------------------------------------------------------------------------------1k5hA03 A:312-398 [code=1.10.1740.10, no name defined] CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eeeeee...hhhhhhhhhhhhhh...eeeeeee...hhhhhhhhhhhhh..eeee.hhhhhhhhhhhhhh.....eeeehhhhhhhhhh.....eeee...hhhhhhhhhhhhhh..eeee.hhhhhhhhhhhhhhhhhhhh..eee.hhhhhhhhhh.hhhhhh......hhhh.eeeeeeee.......hhhhhhhh..........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhh.eeeee.....eeeeeee....eeeee....hhhhhhhhhhh............................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1k5h A 1 MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEFSPRYAVMDDEASAKLLKTMLQQQGSRTEVLSGQQAACDMAALEDVDQVMAAIVGAAGLLPTLAAIRAGKTILLANKESLVTCGRLFMDAVKQSKAQLLPVDSEHNAIFQSLPQPIQHNLGYADLEQNGVVSILLTGSGGPFRETPLRDLATMTPDQACRHPNWSMGRKISVDSATMMNKGLEYIEARWLFNASASQMEVLIHPQSVIHSMVRYQDGSVLAQLGEPDMRTPIAHTMAWPNRVNSGVKPLDFCKLSALTFAAPDYDRYPCLKLAMEAFEQGQAATTALNAANEITVAAFLAQQIRFTDIAALNLSVLEKMDMREPQCVDDVLSVDANAREVARKEVMRLAS 398
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390
Chain B from PDB Type:PROTEIN Length:391
aligned with DXR_ECOLI | P45568 from UniProtKB/Swiss-Prot Length:398
Alignment length:396
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390
DXR_ECOLI 1 MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEFSPRYAVMDDEASAKLLKTMLQQQGSRTEVLSGQQAACDMAALEDVDQVMAAIVGAAGLLPTLAAIRAGKTILLANKESLVTCGRLFMDAVKQSKAQLLPVDSEHNAIFQSLPQPIQHNLGYADLEQNGVVSILLTGSGGPFRETPLRDLATMTPDQACRHPNWSMGRKISVDSATMMNKGLEYIEARWLFNASASQMEVLIHPQSVIHSMVRYQDGSVLAQLGEPDMRTPIAHTMAWPNRVNSGVKPLDFCKLSALTFAAPDYDRYPCLKLAMEAFEQGQAATTALNAANEITVAAFLAQQIRFTDIAALNLSVLEKMDMREPQCVDDVLSVDANAREVARKEVMRL 396
SCOP domains d1k5hb2 B:1-125,B:275-300 1-deoxy-D-xylulose-5-phosphate reductoisomerase d1k5hb3 B:126-274 1-deoxy-D-xylulose-5-phosphate reductoisomerase d1k5hb2 B:1-125,B:275-300 d1k5hb1 B:301-396 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C -terminal domain SCOP domains
CATH domains 1k5hB01 B:1-150 NAD(P)-binding Rossmann-like Domain ------------------------------------------------------------- ------------------------------------------------------------------------------------------------1k5hB03 B:312-396 [code=1.10.1740.10, no name defined] CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author .eeeeee...hhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhhh...eeee.hhhhhhhhhhhhhh.....eeeehhhhhhhhh......eeee...hhhhhhhhhhhhhh..eeee..hhhhhhhhhhhhhhhhhhh..eee.hhhhhhhhhhhhhhhhh......hhhh.eeeeeeee........hhhhhhhhhhhhh.....----.hhhhhhhhhhhhhhhhhhhhhhhh.hhh.eeeee.....eeeeeee....eeeee....hhhhhhhhhhh............................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhh...-....hhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
1k5h B 1 MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEFSPRYAVMDDEASAKLLKTMLQQQGSRTEVLSGQQAACDMAALEDVDQVMAAIVGAAGLLPTLAAIRAGKTILLANKESLVTCGRLFMDAVKQSKAQLLPVDSEHNAIFQSLPQPIQHNLGYADLEQNGVVSILLTGSGGPFRETPLRDLATMTPDQACRHPN----RKISVDSATMMNKGLEYIEARWLFNASASQMEVLIHPQSVIHSMVRYQDGSVLAQLGEPDMRTPIAHTMAWPNRVNSGVKPLDFCKLSALTFAAPDYDRYPCLKLAMEAFEQGQAATTALNAANEITVAAFLAQQIRFTDIAALNLSVLEKMD-REPQCVDDVLSVDANAREVARKEVMRL 396
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210| | 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390
211 216 368 |
370
Chain C from PDB Type:PROTEIN Length:398
aligned with DXR_ECOLI | P45568 from UniProtKB/Swiss-Prot Length:398
Alignment length:398
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390
DXR_ECOLI 1 MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEFSPRYAVMDDEASAKLLKTMLQQQGSRTEVLSGQQAACDMAALEDVDQVMAAIVGAAGLLPTLAAIRAGKTILLANKESLVTCGRLFMDAVKQSKAQLLPVDSEHNAIFQSLPQPIQHNLGYADLEQNGVVSILLTGSGGPFRETPLRDLATMTPDQACRHPNWSMGRKISVDSATMMNKGLEYIEARWLFNASASQMEVLIHPQSVIHSMVRYQDGSVLAQLGEPDMRTPIAHTMAWPNRVNSGVKPLDFCKLSALTFAAPDYDRYPCLKLAMEAFEQGQAATTALNAANEITVAAFLAQQIRFTDIAALNLSVLEKMDMREPQCVDDVLSVDANAREVARKEVMRLAS 398
SCOP domains d1k5hc2 C:1-125,C:275-300 1-deoxy-D-xylulose-5-phosphate reductoisomerase d1k5hc3 C:126-274 1-deoxy-D-xylulose-5-phosphate reductoisomerase d1k5hc2 C:1-125,C:275-300 d1k5hc1 C:301-398 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain SCOP domains
CATH domains 1k5hC01 C:1-150 NAD(P)-binding Rossmann-like Domain -----------------------------------------------------------------------------------------------------------------------------------------------------------------1k5hC03 C:312-398 [code=1.10.1740.10, no name defined] CATH domains
Pfam domains (1) ---DXP_reductoisom-1k5hC04 C:4-132 -------------DXP_redisom_C-1k5hC01 C:146-239 -------------------------------DXPR_C-1k5hC07 C:271-389 --------- Pfam domains (1)
Pfam domains (2) ---DXP_reductoisom-1k5hC05 C:4-132 -------------DXP_redisom_C-1k5hC02 C:146-239 -------------------------------DXPR_C-1k5hC08 C:271-389 --------- Pfam domains (2)
Pfam domains (3) ---DXP_reductoisom-1k5hC06 C:4-132 -------------DXP_redisom_C-1k5hC03 C:146-239 -------------------------------DXPR_C-1k5hC09 C:271-389 --------- Pfam domains (3)
Sec.struct. author .eeeeee...hhhhhhhhhhhh.....eeeeeee...hhhhhhhhhhhhh..eeee.hhhhhhhhhhhhhh.......eehhhhhhhhhh.....eeee...hhhhhhhhhhhhhh..eeee....hhhhhhhhhhhhhhhhh.eeee.hhhhhhhhhh.hhhhhh......hhhh.eeeeeeee........hhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhhhhh.hhh.eeeee.....eeeeeee....eeeee....hhhhhhhhhhh...........hhhhh............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1k5h C 1 MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEFSPRYAVMDDEASAKLLKTMLQQQGSRTEVLSGQQAACDMAALEDVDQVMAAIVGAAGLLPTLAAIRAGKTILLANKESLVTCGRLFMDAVKQSKAQLLPVDSEHNAIFQSLPQPIQHNLGYADLEQNGVVSILLTGSGGPFRETPLRDLATMTPDQACRHPNWSMGRKISVDSATMMNKGLEYIEARWLFNASASQMEVLIHPQSVIHSMVRYQDGSVLAQLGEPDMRTPIAHTMAWPNRVNSGVKPLDFCKLSALTFAAPDYDRYPCLKLAMEAFEQGQAATTALNAANEITVAAFLAQQIRFTDIAALNLSVLEKMDMREPQCVDDVLSVDANAREVARKEVMRLAS 398
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390
Legend: |
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→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |