Chain A from PDB Type:PROTEIN Length:130
aligned with SICP_SALTS | E1WAC4 from UniProtKB/Swiss-Prot Length:116
Alignment length:130
1
- | 6 16 26 36 46 56 66 76 86 96 106 116
SICP_SALTS - --------------MGLPLTFDDNNQCLLLLDSDIFTSIEAKDDIWLLNGMIIPLSPVCGDSIWRQIMVINGELAANNEGTLAYIDAAETLLLIHAITDLTNTYHIISQLESFVNQQEALKNILQEYAKV 116
SCOP domains d1jyoa_ A: Virulence effector SptP secretion chaperone SicP SCOP domains
CATH domains 1jyoA00 A:1-130 [code=3.30.1460.10, no name defined] CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author hhhhhhhhhhhhhhhh.........eeeeee...eeeeeeee..eeeeeeeeee.....hhhhhhhhhhhhhhhhhh...eeeee....eeeeeeee....hhhhhhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------- Transcript
1jyo A 1 LQAHQDIIANIGEKLGLPLTFDDNNQCLLLLDSDIFTSIEAKDDIWLLNGMIIPLSPVCGDSIWRQIMVINGELAANNEGTLAYIDAAETLLLIHAITDLTNTYHIISQLESFVNQQEALKNILQEYAKV 130
10 20 30 40 50 60 70 80 90 100 110 120 130
Chain A from PDB Type:PROTEIN Length:130
aligned with SICP_SALTY | P0CL16 from UniProtKB/Swiss-Prot Length:116
Alignment length:130
1
- | 6 16 26 36 46 56 66 76 86 96 106 116
SICP_SALTY - --------------MGLPLTFDDNNQCLLLLDSDIFTSIEAKDDIWLLNGMIIPLSPVCGDSIWRQIMVINGELAANNEGTLAYIDAAETLLLIHAITDLTNTYHIISQLESFVNQQEALKNILQEYAKV 116
SCOP domains d1jyoa_ A: Virulence effector SptP secretion chaperone SicP SCOP domains
CATH domains 1jyoA00 A:1-130 [code=3.30.1460.10, no name defined] CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author hhhhhhhhhhhhhhhh.........eeeeee...eeeeeeee..eeeeeeeeee.....hhhhhhhhhhhhhhhhhh...eeeee....eeeeeeee....hhhhhhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------- Transcript
1jyo A 1 LQAHQDIIANIGEKLGLPLTFDDNNQCLLLLDSDIFTSIEAKDDIWLLNGMIIPLSPVCGDSIWRQIMVINGELAANNEGTLAYIDAAETLLLIHAITDLTNTYHIISQLESFVNQQEALKNILQEYAKV 130
10 20 30 40 50 60 70 80 90 100 110 120 130
Chain B from PDB Type:PROTEIN Length:130
aligned with SICP_SALTS | E1WAC4 from UniProtKB/Swiss-Prot Length:116
Alignment length:130
1
- | 6 16 26 36 46 56 66 76 86 96 106 116
SICP_SALTS - --------------MGLPLTFDDNNQCLLLLDSDIFTSIEAKDDIWLLNGMIIPLSPVCGDSIWRQIMVINGELAANNEGTLAYIDAAETLLLIHAITDLTNTYHIISQLESFVNQQEALKNILQEYAKV 116
SCOP domains d1jyob_ B: Virulence effector SptP secretion chaperone SicP SCOP domains
CATH domains 1jyoB00 B:1-130 [code=3.30.1460.10, no name defined] CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author hhhhhhhhhhhhhhhh.........eeeeee...eeeeeeee..eeeeeeeeee.....hhhhhhhhhhhhhhhhhh...eeeee....eeeeeeee....hhhhhhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------- Transcript
1jyo B 1 LQAHQDIIANIGEKLGLPLTFDDNNQCLLLLDSDIFTSIEAKDDIWLLNGMIIPLSPVCGDSIWRQIMVINGELAANNEGTLAYIDAAETLLLIHAITDLTNTYHIISQLESFVNQQEALKNILQEYAKV 130
10 20 30 40 50 60 70 80 90 100 110 120 130
Chain B from PDB Type:PROTEIN Length:130
aligned with SICP_SALTY | P0CL16 from UniProtKB/Swiss-Prot Length:116
Alignment length:130
1
- | 6 16 26 36 46 56 66 76 86 96 106 116
SICP_SALTY - --------------MGLPLTFDDNNQCLLLLDSDIFTSIEAKDDIWLLNGMIIPLSPVCGDSIWRQIMVINGELAANNEGTLAYIDAAETLLLIHAITDLTNTYHIISQLESFVNQQEALKNILQEYAKV 116
SCOP domains d1jyob_ B: Virulence effector SptP secretion chaperone SicP SCOP domains
CATH domains 1jyoB00 B:1-130 [code=3.30.1460.10, no name defined] CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author hhhhhhhhhhhhhhhh.........eeeeee...eeeeeeee..eeeeeeeeee.....hhhhhhhhhhhhhhhhhh...eeeee....eeeeeeee....hhhhhhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------- Transcript
1jyo B 1 LQAHQDIIANIGEKLGLPLTFDDNNQCLLLLDSDIFTSIEAKDDIWLLNGMIIPLSPVCGDSIWRQIMVINGELAANNEGTLAYIDAAETLLLIHAITDLTNTYHIISQLESFVNQQEALKNILQEYAKV 130
10 20 30 40 50 60 70 80 90 100 110 120 130
Chain C from PDB Type:PROTEIN Length:130
aligned with SICP_SALTS | E1WAC4 from UniProtKB/Swiss-Prot Length:116
Alignment length:130
1
- | 6 16 26 36 46 56 66 76 86 96 106 116
SICP_SALTS - --------------MGLPLTFDDNNQCLLLLDSDIFTSIEAKDDIWLLNGMIIPLSPVCGDSIWRQIMVINGELAANNEGTLAYIDAAETLLLIHAITDLTNTYHIISQLESFVNQQEALKNILQEYAKV 116
SCOP domains d1jyoc_ C: Virulence effector SptP secretion chaperone SicP SCOP domains
CATH domains 1jyoC00 C:1-130 [code=3.30.1460.10, no name defined] CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author hhhhhhhhhhhhhhhh.........eeeeee...eeeeeeee..eeeeeeeeee.....hhhhhhhhhhhhhhhhhh...eeeee....eeeeeeee....hhhhhhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------- Transcript
1jyo C 1 LQAHQDIIANIGEKLGLPLTFDDNNQCLLLLDSDIFTSIEAKDDIWLLNGMIIPLSPVCGDSIWRQIMVINGELAANNEGTLAYIDAAETLLLIHAITDLTNTYHIISQLESFVNQQEALKNILQEYAKV 130
10 20 30 40 50 60 70 80 90 100 110 120 130
Chain C from PDB Type:PROTEIN Length:130
aligned with SICP_SALTY | P0CL16 from UniProtKB/Swiss-Prot Length:116
Alignment length:130
1
- | 6 16 26 36 46 56 66 76 86 96 106 116
SICP_SALTY - --------------MGLPLTFDDNNQCLLLLDSDIFTSIEAKDDIWLLNGMIIPLSPVCGDSIWRQIMVINGELAANNEGTLAYIDAAETLLLIHAITDLTNTYHIISQLESFVNQQEALKNILQEYAKV 116
SCOP domains d1jyoc_ C: Virulence effector SptP secretion chaperone SicP SCOP domains
CATH domains 1jyoC00 C:1-130 [code=3.30.1460.10, no name defined] CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author hhhhhhhhhhhhhhhh.........eeeeee...eeeeeeee..eeeeeeeeee.....hhhhhhhhhhhhhhhhhh...eeeee....eeeeeeee....hhhhhhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------- Transcript
1jyo C 1 LQAHQDIIANIGEKLGLPLTFDDNNQCLLLLDSDIFTSIEAKDDIWLLNGMIIPLSPVCGDSIWRQIMVINGELAANNEGTLAYIDAAETLLLIHAITDLTNTYHIISQLESFVNQQEALKNILQEYAKV 130
10 20 30 40 50 60 70 80 90 100 110 120 130
Chain D from PDB Type:PROTEIN Length:130
aligned with SICP_SALTS | E1WAC4 from UniProtKB/Swiss-Prot Length:116
Alignment length:130
1
- | 6 16 26 36 46 56 66 76 86 96 106 116
SICP_SALTS - --------------MGLPLTFDDNNQCLLLLDSDIFTSIEAKDDIWLLNGMIIPLSPVCGDSIWRQIMVINGELAANNEGTLAYIDAAETLLLIHAITDLTNTYHIISQLESFVNQQEALKNILQEYAKV 116
SCOP domains d1jyod_ D: Virulence effector SptP secretion chaperone SicP SCOP domains
CATH domains 1jyoD00 D:1-130 [code=3.30.1460.10, no name defined] CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author hhhhhhhhhhhhhhhh.........eeeeee...eeeeeeee..eeeeeeeeee.....hhhhhhhhhhhhhhhhhh...eeeee....eeeeeeee....hhhhhhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------- Transcript
1jyo D 1 LQAHQDIIANIGEKLGLPLTFDDNNQCLLLLDSDIFTSIEAKDDIWLLNGMIIPLSPVCGDSIWRQIMVINGELAANNEGTLAYIDAAETLLLIHAITDLTNTYHIISQLESFVNQQEALKNILQEYAKV 130
10 20 30 40 50 60 70 80 90 100 110 120 130
Chain D from PDB Type:PROTEIN Length:130
aligned with SICP_SALTY | P0CL16 from UniProtKB/Swiss-Prot Length:116
Alignment length:130
1
- | 6 16 26 36 46 56 66 76 86 96 106 116
SICP_SALTY - --------------MGLPLTFDDNNQCLLLLDSDIFTSIEAKDDIWLLNGMIIPLSPVCGDSIWRQIMVINGELAANNEGTLAYIDAAETLLLIHAITDLTNTYHIISQLESFVNQQEALKNILQEYAKV 116
SCOP domains d1jyod_ D: Virulence effector SptP secretion chaperone SicP SCOP domains
CATH domains 1jyoD00 D:1-130 [code=3.30.1460.10, no name defined] CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author hhhhhhhhhhhhhhhh.........eeeeee...eeeeeeee..eeeeeeeeee.....hhhhhhhhhhhhhhhhhh...eeeee....eeeeeeee....hhhhhhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------- Transcript
1jyo D 1 LQAHQDIIANIGEKLGLPLTFDDNNQCLLLLDSDIFTSIEAKDDIWLLNGMIIPLSPVCGDSIWRQIMVINGELAANNEGTLAYIDAAETLLLIHAITDLTNTYHIISQLESFVNQQEALKNILQEYAKV 130
10 20 30 40 50 60 70 80 90 100 110 120 130
Chain E from PDB Type:PROTEIN Length:102
aligned with SPTP_SALTY | P74873 from UniProtKB/Swiss-Prot Length:543
Alignment length:102
45 55 65 75 85 95 105 115 125 135
SPTP_SALTY 36 DKAYVAPEKFSSKVLTWLGKMPLFKNTEVVQKHTENIRVQDQKILQTFLHALTEKYGETAVNDALLMSRINMNKPLTQRLAVQITECVKAADEGFINLIKSK 137
SCOP domains d1jyoe_ E: Virulence effector SptP domain SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------ CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author ...ee.........eeeee......hhhhhhhhhhhh...hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhh...hhhhh.eee..hhhhhhhhhhhhhhhhh Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------ Transcript
1jyo E 36 DKAYVAPEKFSSKVLTWLGKMPLFKNTEVVQKHTENIRVQDQKILQTFLHALTEKYGETAVNDALLMSRINMNKPLTQRLAVQITECVKAADEGFINLIKSK 137
45 55 65 75 85 95 105 115 125 135
Chain F from PDB Type:PROTEIN Length:104
aligned with SPTP_SALTY | P74873 from UniProtKB/Swiss-Prot Length:543
Alignment length:104
45 55 65 75 85 95 105 115 125 135
SPTP_SALTY 36 DKAYVAPEKFSSKVLTWLGKMPLFKNTEVVQKHTENIRVQDQKILQTFLHALTEKYGETAVNDALLMSRINMNKPLTQRLAVQITECVKAADEGFINLIKSKDN 139
SCOP domains d1jyof_ F: Virulence effector SptP domain SCOP domains
CATH domains -------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains (1) -----SicP-binding-1jyoF01 F:41-121 ------------------ Pfam domains (1)
Pfam domains (2) -----SicP-binding-1jyoF02 F:41-121 ------------------ Pfam domains (2)
Sec.struct. author ...ee.........eee........hhhhhhhhhhh....hhhhhhhhhhhhhhh..hhhhhhhhhhhhhh...hhhhh.eee..hhhhhhhhhhhhhhhhh.. Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------- Transcript
1jyo F 36 DKAYVAPEKFSSKVLTWLGKMPLFKNTEVVQKHTENIRVQDQKILQTFLHALTEKYGETAVNDALLMSRINMNKPLTQRLAVQITECVKAADEGFINLIKSKDN 139
45 55 65 75 85 95 105 115 125 135
Legend: |
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→ Mismatch |
(orange background) |
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→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |