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(-) Description

Title :  CRYSTAL STRUCTURE OF LIGAND-BINDING REPEAT CR7 FROM LRP
 
Authors :  M. Simonovic, K. Dolmer, W. Huang, D. K. Strickland, K. Volz, P. G. W. Gettins
Date :  21 May 01  (Deposition) - 19 Dec 01  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.85
Chains :  Asym./Biol. Unit :  A
Keywords :  Ligand Binding, Calcium Binding, Complement-Like Repeat, Lrp Receptor, Signaling Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  M. Simonovic, K. Dolmer, W. Huang, D. K. Strickland, K. Volz, P. G. Gettins
Calcium Coordination And Ph Dependence Of The Calcium Affinity Of Ligand-Binding Repeat Cr7 From The Lrp. Comparison With Related Domains From The Lrp And The Ldl Receptor.
Biochemistry V. 40 15127 2001
PubMed-ID: 11735395  |  Reference-DOI: 10.1021/BI015688M
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 1
    ChainsA
    EngineeredYES
    Expression SystemESCHERICHIA COLI BL21(DE3)
    Expression System PlasmidPGEX-2T
    Expression System StrainBL21 (DE3)
    Expression System Taxid469008
    Expression System Vector TypePLASMID
    FragmentCOMPLEMENT-LIKE REPEAT 7 (CR7), LDL-RECEPTOR CLASS A 7
    MutationYES
    Organism CommonHUMAN
    Organism ScientificHOMO SAPIENS
    Organism Taxid9606

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

Asymmetric/Biological Unit (1, 1)
No.NameCountTypeFull Name
1CA1Ligand/IonCALCIUM ION

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWARETRP A:22 , ASP A:25 , ASP A:27 , ASP A:29 , ASP A:35 , GLU A:36BINDING SITE FOR RESIDUE CA A 201

(-) SS Bonds  (3, 3)

Asymmetric/Biological Unit
No.Residues
1A:5 -A:17
2A:12 -A:30
3A:24 -A:41

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 1J8E)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1J8E)

(-) PROSITE Motifs  (2, 2)

Asymmetric/Biological Unit (2, 2)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1LDLRA_2PS50068 LDL-receptor class A (LDLRA) domain profile.LRP1_HUMAN26-65
71-109
853-891
894-932
935-972
975-1012
1014-1052
1061-1098
1103-1141
1144-1183
2523-2562
2565-2601
2604-2640
2638-2689
2695-2731
2733-2770
2773-2813
2817-2854
2857-2898
2903-2940
3333-3370
3373-3409
3412-3449
3452-3490
3493-3532
3535-3571
3574-3610
3612-3648
3653-3691
3694-3732
3740-3777
  1-
-
-
-
-
-
A:4-42
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
2LDLRA_1PS01209 LDL-receptor class A (LDLRA) domain signature.LRP1_HUMAN40-64
85-108
866-890
907-931
948-971
989-1011
1027-1051
1075-1097
1118-1140
1159-1182
2537-2561
2578-2600
2617-2639
2708-2730
2746-2769
2787-2812
2830-2853
2917-2939
3346-3369
3426-3448
3466-3489
3507-3531
3548-3570
3587-3609
3625-3647
3709-3731
3754-3776
  1-
-
-
-
-
-
A:17-41
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-

(-) Exons   (1, 1)

Asymmetric/Biological Unit (1, 1)
 ENSEMBLUniProtKBPDB
No.Transcript IDExonExon IDGenome LocationLengthIDLocationLengthCountLocationLength
1.1bENST000002430771bENSE00001217215chr12:57522282-57522814533LRP1_HUMAN1-23230--
1.2ENST000002430772ENSE00001107512chr12:57532242-57532364123LRP1_HUMAN23-64420--
1.3ENST000002430773ENSE00001107525chr12:57535157-57535294138LRP1_HUMAN64-110470--
1.4ENST000002430774ENSE00000838818chr12:57537462-57537581120LRP1_HUMAN110-150410--
1.5ENST000002430775ENSE00001107561chr12:57538755-57538883129LRP1_HUMAN150-193440--
1.6ENST000002430776ENSE00001107552chr12:57539010-57539273264LRP1_HUMAN193-281890--
1.9ENST000002430779ENSE00001320947chr12:57547991-57548153163LRP1_HUMAN281-335550--
1.10ENST0000024307710ENSE00001302177chr12:57548262-57548484223LRP1_HUMAN335-409750--
1.11ENST0000024307711ENSE00001330203chr12:57549877-57550066190LRP1_HUMAN410-473640--
1.12ENST0000024307712ENSE00001301122chr12:57550560-57550703144LRP1_HUMAN473-521490--
1.13ENST0000024307713ENSE00001298063chr12:57552185-57552421237LRP1_HUMAN521-600800--
1.14ENST0000024307714ENSE00001299981chr12:57553608-57553788181LRP1_HUMAN600-660610--
1.15ENST0000024307715ENSE00001327741chr12:57554676-57554898223LRP1_HUMAN660-734750--
1.16ENST0000024307716ENSE00001318771chr12:57556100-57556301202LRP1_HUMAN735-802680--
1.17ENST0000024307717ENSE00001295270chr12:57556641-57556766126LRP1_HUMAN802-844430--
1.18ENST0000024307718ENSE00001317407chr12:57559588-57559728141LRP1_HUMAN844-891480--
1.19ENST0000024307719ENSE00001324415chr12:57559867-57559992126LRP1_HUMAN891-933430--
1.20ENST0000024307720ENSE00001318999chr12:57560713-57560829117LRP1_HUMAN933-972400--
1.21ENST0000024307721ENSE00001290991chr12:57561227-5756130781LRP1_HUMAN972-999280--
1.22ENST0000024307722ENSE00001321501chr12:57562923-57563090168LRP1_HUMAN999-1055571A:1-44 (gaps)52
1.23ENST0000024307723ENSE00001316630chr12:57566951-57567133183LRP1_HUMAN1055-1116620--
1.24ENST0000024307724ENSE00001294437chr12:57567563-57567763201LRP1_HUMAN1116-1183680--
1.25ENST0000024307725ENSE00001312663chr12:57569243-57569488246LRP1_HUMAN1183-1265830--
1.26ENST0000024307726ENSE00001296112chr12:57569692-57569889198LRP1_HUMAN1265-1331670--
1.27ENST0000024307727ENSE00001319703chr12:57570824-57571028205LRP1_HUMAN1331-1399690--
1.28ENST0000024307728ENSE00001292073chr12:57571210-57571374165LRP1_HUMAN1399-1454560--
1.29ENST0000024307729ENSE00001325523chr12:57572142-57572386245LRP1_HUMAN1454-1536830--
1.30ENST0000024307730ENSE00001297961chr12:57572673-57572804132LRP1_HUMAN1536-1580450--
1.31ENST0000024307731ENSE00001311178chr12:57573112-57573339228LRP1_HUMAN1580-1656770--
1.32ENST0000024307732ENSE00001309278chr12:57573565-57573739175LRP1_HUMAN1656-1714590--
1.33ENST0000024307733ENSE00001328727chr12:57573830-5757392495LRP1_HUMAN1714-1746330--
1.34ENST0000024307734ENSE00001290948chr12:57574113-57574262150LRP1_HUMAN1746-1796510--
1.35ENST0000024307735ENSE00001314212chr12:57574450-57574590141LRP1_HUMAN1796-1843480--
1.36ENST0000024307736ENSE00001307564chr12:57574940-57575074135LRP1_HUMAN1843-1888460--
1.37ENST0000024307737ENSE00001305812chr12:57577162-57577293132LRP1_HUMAN1888-1932450--
1.38ENST0000024307738ENSE00001330334chr12:57577558-57577692135LRP1_HUMAN1932-1977460--
1.39ENST0000024307739ENSE00001292593chr12:57577868-57577997130LRP1_HUMAN1977-2020440--
1.40ENST0000024307740ENSE00001326661chr12:57578109-57578235127LRP1_HUMAN2020-2062430--
1.41ENST0000024307741ENSE00001308210chr12:57578622-57578773152LRP1_HUMAN2063-2113510--
1.42ENST0000024307742ENSE00001304021chr12:57578864-57578988125LRP1_HUMAN2113-2155430--
1.43ENST0000024307743ENSE00001323007chr12:57579314-57579691378LRP1_HUMAN2155-22811270--
1.44ENST0000024307744ENSE00001328642chr12:57581050-57581239190LRP1_HUMAN2281-2344640--
1.45ENST0000024307745ENSE00001316690chr12:57584588-57584792205LRP1_HUMAN2344-2412690--
1.46ENST0000024307746ENSE00001299409chr12:57585103-57585295193LRP1_HUMAN2413-2477650--
1.47ENST0000024307747ENSE00001316808chr12:57586628-57586753126LRP1_HUMAN2477-2519430--
1.48ENST0000024307748ENSE00001321088chr12:57586959-57587087129LRP1_HUMAN2519-2562440--
1.49ENST0000024307749ENSE00001319306chr12:57587349-57587468120LRP1_HUMAN2562-2602410--
1.50ENST0000024307750ENSE00001290843chr12:57587682-57587795114LRP1_HUMAN2602-2640390--
1.51ENST0000024307751ENSE00001319434chr12:57588137-57588286150LRP1_HUMAN2640-2690510--
1.52ENST0000024307752ENSE00001323838chr12:57588360-57588482123LRP1_HUMAN2690-2731420--
1.53ENST0000024307753ENSE00001318058chr12:57588768-57588884117LRP1_HUMAN2731-2770400--
1.54ENST0000024307754ENSE00001302141chr12:57589054-57589182129LRP1_HUMAN2770-2813440--
1.55ENST0000024307755ENSE00001289847chr12:57589441-57589563123LRP1_HUMAN2813-2854420--
1.56ENST0000024307756ENSE00001314255chr12:57589646-57589786141LRP1_HUMAN2854-2901480--
1.57ENST0000024307757ENSE00001291411chr12:57589870-57590060191LRP1_HUMAN2901-2964640--
1.58ENST0000024307758ENSE00001315700chr12:57590765-57590948184LRP1_HUMAN2965-3026620--
1.59ENST0000024307759ENSE00001292871chr12:57591082-5759116786LRP1_HUMAN3026-3054290--
1.60ENST0000024307760ENSE00001325742chr12:57591328-57591447120LRP1_HUMAN3055-3094400--
1.61ENST0000024307761ENSE00001298595chr12:57591939-57592126188LRP1_HUMAN3095-3157630--
1.62ENST0000024307762ENSE00001318488chr12:57592248-57592453206LRP1_HUMAN3157-3226700--
1.63ENST0000024307763ENSE00001305366chr12:57592995-57593183189LRP1_HUMAN3226-3289640--
1.64ENST0000024307764ENSE00001328542chr12:57593660-57593808149LRP1_HUMAN3289-3338500--
1.65ENST0000024307765ENSE00001291635chr12:57594225-5759431894LRP1_HUMAN3339-3370320--
1.66ENST0000024307766ENSE00001313605chr12:57594482-57594598117LRP1_HUMAN3370-3409400--
1.67ENST0000024307767ENSE00001307582chr12:57594817-57594936120LRP1_HUMAN3409-3449410--
1.68ENST0000024307768ENSE00001322267chr12:57595280-57595402123LRP1_HUMAN3449-3490420--
1.69ENST0000024307769ENSE00001314694chr12:57595563-57595688126LRP1_HUMAN3490-3532430--
1.70ENST0000024307770ENSE00001306379chr12:57596204-57596320117LRP1_HUMAN3532-3571400--
1.71ENST0000024307771ENSE00001324059chr12:57596964-57597070107LRP1_HUMAN3571-3606360--
1.72ENST0000024307772ENSE00001731153chr12:57597172-57597304133LRP1_HUMAN3607-3651450--
1.73ENST0000024307773ENSE00001760982chr12:57598193-57598312120LRP1_HUMAN3651-3691410--
1.74ENST0000024307774ENSE00001307523chr12:57598410-57598532123LRP1_HUMAN3691-3732420--
1.75ENST0000024307775ENSE00001295680chr12:57598892-57599032141LRP1_HUMAN3732-3779480--
1.76ENST0000024307776ENSE00001300743chr12:57599134-57599268135LRP1_HUMAN3779-3824460--
1.77ENST0000024307777ENSE00001330472chr12:57599341-57599460120LRP1_HUMAN3824-3864410--
1.78ENST0000024307778ENSE00001301800chr12:57600256-57600524269LRP1_HUMAN3864-3953900--
1.79ENST0000024307779ENSE00001297467chr12:57601821-57601999179LRP1_HUMAN3954-4013600--
1.80ENST0000024307780ENSE00001303363chr12:57602494-57602600107LRP1_HUMAN4013-4049370--
1.81ENST0000024307781ENSE00001322130chr12:57602866-57602982117LRP1_HUMAN4049-4088400--
1.82ENST0000024307782ENSE00001304178chr12:57603475-57603651177LRP1_HUMAN4088-4147600--
1.83ENST0000024307783ENSE00001290032chr12:57603812-57603952141LRP1_HUMAN4147-4194480--
1.84ENST0000024307784ENSE00001295389chr12:57604090-57604263174LRP1_HUMAN4194-4252590--
1.85ENST0000024307785ENSE00001316267chr12:57604501-57604662162LRP1_HUMAN4252-4306550--
1.86ENST0000024307786ENSE00001324584chr12:57604959-57605133175LRP1_HUMAN4306-4364590--
1.87ENST0000024307787ENSE00001317091chr12:57605270-57605371102LRP1_HUMAN4364-4398350--
1.88ENST0000024307788ENSE00001297966chr12:57605533-5760559765LRP1_HUMAN4398-4420230--
1.89ENST0000024307789ENSE00001319205chr12:57605710-5760580091LRP1_HUMAN4420-4450310--
1.90ENST0000024307790ENSE00001296038chr12:57605900-57606044145LRP1_HUMAN4450-4498490--
1.91ENST0000024307791ENSE00001319616chr12:57606198-57607123926LRP1_HUMAN4499-4544460--

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:44
 aligned with LRP1_HUMAN | Q07954 from UniProtKB/Swiss-Prot  Length:4544

    Alignment length:52
                                  1012      1022      1032      1042      1052  
          LRP1_HUMAN   1003 GDNSDEAGCSHSCSSTQFKCNSGRCIPEHWTCDGDNDCGDYSDETHANCTNQ 1054
               SCOP domains d        1j8ea_ A:                                   SCOP domains
               CATH domains 1        j8eA00 A:1-44                               CATH domains
               Pfam domains ---------------------------------------------------- Pfam domains
         Sec.struct. author .--------.......eee.....eee.hhh.........hhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------- SAPs(SNPs)
                PROSITE (1) LDLRA_2   -LDLRA_2  PDB: A:4-42 UniProt: 1014-1052-- PROSITE (1)
                PROSITE (2) LDLRA_1  ---------------LDLRA_1  PDB: A:17-41    --- PROSITE (2)
               Transcript 1 Exon 1.22  PDB: A:1-44 (gaps) UniProt: 999-1055      Transcript 1
                1j8e A    1 G--------SHSCSSTQFKCNSGRCIPEHWTCDGDNDCGDYSDETHANCTNQ   44
                            |        2        12        22        32        42  
                            |        2                                          
                            1                                                   

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 1)

Asymmetric/Biological Unit

(-) CATH Domains  (1, 1)

Asymmetric/Biological Unit

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 1J8E)

(-) Gene Ontology  (50, 50)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A   (LRP1_HUMAN | Q07954)
molecular function
    GO:0034185    apolipoprotein binding    Interacting selectively and non-covalently with an apolipoprotein, the protein component of a lipoprotein complex.
    GO:0005509    calcium ion binding    Interacting selectively and non-covalently with calcium ions (Ca2+).
    GO:0070325    lipoprotein particle receptor binding    Interacting selectively and non-covalently with a lipoprotein particle receptor.
    GO:0042954    lipoprotein transporter activity    Enables the directed movement of any conjugated, water-soluble protein in which the nonprotein group consists of a lipid or lipids, into, out of or within a cell, or between cells.
    GO:0005041    low-density lipoprotein receptor activity    Combining with a low-density lipoprotein particle and delivering the low-density lipoprotein into the cell via endocytosis.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0002020    protease binding    Interacting selectively and non-covalently with any protease or peptidase.
    GO:0005515    protein binding    Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
    GO:0032403    protein complex binding    Interacting selectively and non-covalently with any protein complex (a complex of two or more proteins that may include other nonprotein molecules).
    GO:0004872    receptor activity    Combining with an extracellular or intracellular messenger to initiate a change in cell activity.
biological process
    GO:0007568    aging    A developmental process that is a deterioration and loss of function over time. Aging includes loss of functions such as resistance to disease, homeostasis, and fertility, as well as wear and tear. Aging includes cellular senescence, but is more inclusive. May precede death and may succeed developmental maturation (GO:0021700).
    GO:0097242    amyloid-beta clearance    The process in which amyloid-beta is removed from the brain via receptors.
    GO:0035909    aorta morphogenesis    The process in which the anatomical structures of an aorta are generated and organized. An aorta is an artery that carries blood from the heart to other parts of the body.
    GO:0043277    apoptotic cell clearance    The recognition and removal of an apoptotic cell by a neighboring cell or by a phagocyte.
    GO:0008283    cell proliferation    The multiplication or reproduction of cells, resulting in the expansion of a cell population.
    GO:0021987    cerebral cortex development    The progression of the cerebral cortex over time from its initial formation until its mature state. The cerebral cortex is the outer layered region of the telencephalon.
    GO:0006897    endocytosis    A vesicle-mediated transport process in which cells take up external materials or membrane constituents by the invagination of a small region of the plasma membrane to form a new membrane-bounded vesicle.
    GO:0042157    lipoprotein metabolic process    The chemical reactions and pathways involving any conjugated, water-soluble protein in which the covalently attached nonprotein group consists of a lipid or lipids.
    GO:0042953    lipoprotein transport    The directed movement of any conjugated, water-soluble protein in which the nonprotein group consists of a lipid or lipids, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
    GO:0007275    multicellular organism development    The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult).
    GO:0030178    negative regulation of Wnt signaling pathway    Any process that stops, prevents, or reduces the frequency, rate or extent of the Wnt signaling pathway.
    GO:0043524    negative regulation of neuron apoptotic process    Any process that stops, prevents, or reduces the frequency, rate or extent of cell death by apoptotic process in neurons.
    GO:0010977    negative regulation of neuron projection development    Any process that decreases the rate, frequency or extent of neuron projection development. Neuron projection development is the process whose specific outcome is the progression of a neuron projection over time, from its formation to the mature structure. A neuron projection is any process extending from a neural cell, such as axons or dendrites (collectively called neurites).
    GO:2000587    negative regulation of platelet-derived growth factor receptor-beta signaling pathway    Any process that stops, prevents or reduces the frequency, rate or extent of platelet-derived growth factor receptor-beta signaling pathway.
    GO:0014912    negative regulation of smooth muscle cell migration    Any process that stops, prevents, or reduces the frequency, rate or extent of smooth muscle cell migration.
    GO:0010875    positive regulation of cholesterol efflux    Any process that increases the frequency, rate or extent of cholesterol efflux. Cholesterol efflux is the directed movement of cholesterol, cholest-5-en-3-beta-ol, out of a cell or organelle.
    GO:0032370    positive regulation of lipid transport    Any process that activates or increases the frequency, rate or extent of the directed movement of lipids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
    GO:0051222    positive regulation of protein transport    Any process that activates or increases the frequency, rate or extent of the directed movement of a protein into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
    GO:0007205    protein kinase C-activating G-protein coupled receptor signaling pathway    The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, where the pathway proceeds with activation of protein kinase C (PKC). PKC is activated by second messengers including diacylglycerol (DAG).
    GO:0006898    receptor-mediated endocytosis    An endocytosis process in which cell surface receptors ensure specificity of transport. A specific receptor on the cell surface binds tightly to the extracellular macromolecule (the ligand) that it recognizes; the plasma-membrane region containing the receptor-ligand complex then undergoes endocytosis, forming a transport vesicle containing the receptor-ligand complex and excluding most other plasma-membrane proteins. Receptor-mediated endocytosis generally occurs via clathrin-coated pits and vesicles.
    GO:0032956    regulation of actin cytoskeleton organization    Any process that modulates the frequency, rate or extent of the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins.
    GO:0032374    regulation of cholesterol transport    Any process that modulates the frequency, rate or extent of the directed movement of cholesterol into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
    GO:0032429    regulation of phospholipase A2 activity    Any process that modulates the activity of the enzyme phospholipase A2.
    GO:0001523    retinoid metabolic process    The chemical reactions and pathways involving retinoids, any member of a class of isoprenoids that contain or are derived from four prenyl groups linked head-to-tail. Retinoids include retinol and retinal and structurally similar natural derivatives or synthetic compounds, but need not have vitamin A activity.
cellular component
    GO:0005905    clathrin-coated pit    A part of the endomembrane system in the form of an invagination of a membrane upon which a clathrin coat forms, and that can be converted by vesicle budding into a clathrin-coated vesicle. Coated pits form on the plasma membrane, where they are involved in receptor-mediated selective transport of many proteins and other macromolecules across the cell membrane, in the trans-Golgi network, and on some endosomes.
    GO:0030136    clathrin-coated vesicle    A vesicle with a coat formed of clathrin connected to the membrane via one of the clathrin adaptor complexes.
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
    GO:0030425    dendrite    A neuron projection that has a short, tapering, often branched, morphology, receives and integrates signals from other neurons or from sensory stimuli, and conducts a nerve impulse towards the axon or the cell body. In most neurons, the impulse is conveyed from dendrites to axon via the cell body, but in some types of unipolar neuron, the impulse does not travel via the cell body.
    GO:0030666    endocytic vesicle membrane    The lipid bilayer surrounding an endocytic vesicle.
    GO:0005768    endosome    A vacuole to which materials ingested by endocytosis are delivered.
    GO:0005925    focal adhesion    Small region on the surface of a cell that anchors the cell to the extracellular matrix and that forms a point of termination of actin filaments.
    GO:0016021    integral component of membrane    The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
    GO:0005887    integral component of plasma membrane    The component of the plasma membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
    GO:0005765    lysosomal membrane    The lipid bilayer surrounding the lysosome and separating its contents from the cell cytoplasm.
    GO:0016020    membrane    A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
    GO:0043025    neuronal cell body    The portion of a neuron that includes the nucleus, but excludes cell projections such as axons and dendrites.
    GO:0005730    nucleolus    A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome.
    GO:0005634    nucleus    A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
    GO:0005886    plasma membrane    The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
    GO:0043235    receptor complex    Any protein complex that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function.

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        LRP1_HUMAN | Q079541cr8 1d2l 2fyj 2fyl 2knx 2kny

(-) Related Entries Specified in the PDB File

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