1IYL - JenaLib

Asymmetric Unit (Jmol Viewer)

Asym. Unit - sites (Jmol Viewer)

Biological Unit 1 (Jmol Viewer)

Biol. Unit 1 - sites (Jmol Viewer)

Biological Unit 2 (Jmol Viewer)

Biological Unit 3 (Jmol Viewer)

Biological Unit 4 (Jmol Viewer)

Biological Unit 5 (Jmol Viewer)

Biological Unit 6 (Jmol Viewer)

Title :   CRYSTAL STRUCTURE OF CANDIDA ALBICANS N-MYRISTOYLTRANSFERASE WITH NON-PEPTIDIC INHIBITOR

Authors :   S. Sogabe, T. A. Fukami, K. Morikami, Y. Shiratori, Y. Aoki, A. D'Arcy, F. K. Winkler, D. W. Banner, T. Ohtsuka

Date :   29 Aug 02 (Deposition) - 30 Dec 02 (Release) - 13 Jul 11 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   3.20

Chains :   Asym. Unit : A,B,C,D
Biol. Unit 1: A  (1x)
Biol. Unit 2: B  (1x)
Biol. Unit 3: C  (1x)
Biol. Unit 4: D  (1x)
Biol. Unit 5: A,B  (1x)
Biol. Unit 6: C,D  (1x)

Keywords :   Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   S. Sogabe, M. Masubuchi, K. Sakata, T. A. Fukami, K. Morikami, Y. Shiratori, H. Ebiike, K. Kawasaki, Y. Aoki, N. Shimma, A. D'Arcy, F. K. Winkler, D. W. Banner, T. Ohtsuka
Crystal Structures Of Candida Albicans N-Myristoyltransferase With Two Distinct Inhibitors
Chem. Biol. V. 9 1119 2002
PubMed-ID: 12401496 | Reference-DOI: 10.1016/S1074-5521(02)00240-5

Molecule 1
	Chains	:	A, B, C, D
	EC Number	:	2.3.1.97
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Plasmid	:	PKF19
	Expression System Taxid	:	562
	Expression System Vector Type	:	PLASMID
	Organism Scientific	:	CANDIDA ALBICANS
	Organism Taxid	:	5476
	Synonym	:	GLYCYLPEPTIDE N-TETRADECANOYLTRANSFERASE

		1	2	3	4
Asymmetric Unit	:	A	B	C	D
Biological Unit 1 (1x)	:	A
Biological Unit 2 (1x)	:		B
Biological Unit 3 (1x)	:			C
Biological Unit 4 (1x)	:				D
Biological Unit 5 (1x)	:	A	B
Biological Unit 6 (1x)	:			C	D

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (1, 3)

No.	Name	Count	Type	Full Name
1	R64	3	Ligand/Ion	(1-METHYL-1H-IMIDAZOL-2-YL)-(3-METHYL-4-{3-[(PYRIDIN-3-YLMETHYL)-AMINO]-PROPOXY}-BENZOFURAN-2-YL)-METHANONE

Biological Unit 1 (1, 1)

No.	Name	Count	Type	Full Name
1	R64	1	Ligand/Ion	(1-METHYL-1H-IMIDAZOL-2-YL)-(3-METHYL-4-{3-[(PYRIDIN-3-YLMETHYL)-AMINO]-PROPOXY}-BENZOFURAN-2-YL)-METHANONE

Biological Unit 2 (1, 1)

No.	Name	Count	Type	Full Name
1	R64	1	Ligand/Ion	(1-METHYL-1H-IMIDAZOL-2-YL)-(3-METHYL-4-{3-[(PYRIDIN-3-YLMETHYL)-AMINO]-PROPOXY}-BENZOFURAN-2-YL)-METHANONE

Biological Unit 3 (1, 1)

No.	Name	Count	Type	Full Name
1	R64	1	Ligand/Ion	(1-METHYL-1H-IMIDAZOL-2-YL)-(3-METHYL-4-{3-[(PYRIDIN-3-YLMETHYL)-AMINO]-PROPOXY}-BENZOFURAN-2-YL)-METHANONE

Biological Unit 4 (0, 0)

No.	Name	Count	Type	Full Name
1	R64	-1	Ligand/Ion	(1-METHYL-1H-IMIDAZOL-2-YL)-(3-METHYL-4-{3-[(PYRIDIN-3-YLMETHYL)-AMINO]-PROPOXY}-BENZOFURAN-2-YL)-METHANONE

Biological Unit 5 (1, 2)

No.	Name	Count	Type	Full Name
1	R64	2	Ligand/Ion	(1-METHYL-1H-IMIDAZOL-2-YL)-(3-METHYL-4-{3-[(PYRIDIN-3-YLMETHYL)-AMINO]-PROPOXY}-BENZOFURAN-2-YL)-METHANONE

Biological Unit 6 (1, 1)

No.	Name	Count	Type	Full Name
1	R64	1	Ligand/Ion	(1-METHYL-1H-IMIDAZOL-2-YL)-(3-METHYL-4-{3-[(PYRIDIN-3-YLMETHYL)-AMINO]-PROPOXY}-BENZOFURAN-2-YL)-METHANONE

Asymmetric Unit (3, 3)

No.	Name	Evidence	Residues	Description
1	AC1	SOFTWARE	TYR A:107 , ASP A:110 , TYR A:119 , PHE A:176 , TYR A:225 , HIS A:227 , PHE A:240 , PHE A:339 , ASN A:392 , CYS A:393 , LEU A:394 , LEU A:451	BINDING SITE FOR RESIDUE R64 A 452
2	AC2	SOFTWARE	TYR B:107 , PHE B:117 , TYR B:119 , ASN B:175 , PHE B:176 , TYR B:225 , HIS B:227 , PHE B:240 , PHE B:339 , ILE B:352 , ASN B:392 , CYS B:393 , LEU B:451	BINDING SITE FOR RESIDUE R64 B 452
3	AC3	SOFTWARE	TYR C:107 , ILE C:111 , PHE C:117 , TYR C:119 , ASN C:175 , PHE C:176 , TYR C:225 , HIS C:227 , PHE C:240 , PHE C:339 , ASN C:392 , LEU C:394 , LEU C:451	BINDING SITE FOR RESIDUE R64 C 452

(no "SS Bond" information available for 1IYL)

Asymmetric Unit

No.	Residues
1	Thr A:68	-	Pro A:69

(no "SAP(SNP)/Variant" information available for 1IYL)

Asymmetric Unit (2, 8)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	NMT_1	PS00975	Myristoyl-CoA:protein N-myristoyltransferase signature 1.	NMT_CANAL	173-181	4	A:173-181 B:173-181 C:173-181 D:173-181
2	NMT_2	PS00976	Myristoyl-CoA:protein N-myristoyltransferase signature 2.	NMT_CANAL	407-413	4	A:407-413 B:407-413 C:407-413 D:407-413

Biological Unit 1 (2, 2)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	NMT_1	PS00975	Myristoyl-CoA:protein N-myristoyltransferase signature 1.	NMT_CANAL	173-181	1	A:173-181 - - -
2	NMT_2	PS00976	Myristoyl-CoA:protein N-myristoyltransferase signature 2.	NMT_CANAL	407-413	1	A:407-413 - - -

Biological Unit 2 (2, 2)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	NMT_1	PS00975	Myristoyl-CoA:protein N-myristoyltransferase signature 1.	NMT_CANAL	173-181	1	- B:173-181 - -
2	NMT_2	PS00976	Myristoyl-CoA:protein N-myristoyltransferase signature 2.	NMT_CANAL	407-413	1	- B:407-413 - -

Biological Unit 3 (2, 2)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	NMT_1	PS00975	Myristoyl-CoA:protein N-myristoyltransferase signature 1.	NMT_CANAL	173-181	1	- - C:173-181 -
2	NMT_2	PS00976	Myristoyl-CoA:protein N-myristoyltransferase signature 2.	NMT_CANAL	407-413	1	- - C:407-413 -

Biological Unit 4 (2, 2)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	NMT_1	PS00975	Myristoyl-CoA:protein N-myristoyltransferase signature 1.	NMT_CANAL	173-181	1	- - - D:173-181
2	NMT_2	PS00976	Myristoyl-CoA:protein N-myristoyltransferase signature 2.	NMT_CANAL	407-413	1	- - - D:407-413

Biological Unit 5 (2, 4)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	NMT_1	PS00975	Myristoyl-CoA:protein N-myristoyltransferase signature 1.	NMT_CANAL	173-181	2	A:173-181 B:173-181 - -
2	NMT_2	PS00976	Myristoyl-CoA:protein N-myristoyltransferase signature 2.	NMT_CANAL	407-413	2	A:407-413 B:407-413 - -

Biological Unit 6 (2, 4)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	NMT_1	PS00975	Myristoyl-CoA:protein N-myristoyltransferase signature 1.	NMT_CANAL	173-181	2	- - C:173-181 D:173-181
2	NMT_2	PS00976	Myristoyl-CoA:protein N-myristoyltransferase signature 2.	NMT_CANAL	407-413	2	- - C:407-413 D:407-413

(no "Exon" information available for 1IYL)

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:384
 aligned with NMT_CANAL | P30418 from UniProtKB/Swiss-Prot  Length:451

    Alignment length:384
                                    77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447    
            NMT_CANAL    68 TPEDVPNDPLPLISDFEWSTLDIDDNLQLDELYKLLYDNYVEDIDATFRFKYSHEFFQWALKPPGWRKDWHVGVRVKSTGKLVAFIAATPVTFKLNKSNKVIDSVEINFLCIHKKLRNKRLAPVLIKEITRRVNKQNIWQALYTGGSILPTPLTTCRYQHRPINWSKLHDVGFSHLPPNQTKSSMVASYTLPNNPKLKGLRPMTGKDVSTVLSLLYKYQERFDIVQLFTEEEFKHWMLGHDENSDSNVVKSYVVEDENGVITDYFSYYLLPFTVLDNAQHDELGIAYLFYYASDSFEKPNYKKRLNELITDALITSKKFGVDVFNCLTCQDNTYFLKDCKFGSGDGFLNYYLFNYRTFPMDGGIDKKTKEVVEDQTSGIGVVLL 451
               SCOP domains d1iyla1 A:68-224 N-myristoyl transferase, NMT                                                                                                                d1iyla2 A:225-451 N-myristoyl transferase, NMT                                                                                                                                                                                      SCOP domains
               CATH domains 1iylA01 A:68-206  [code=3.40.630.30, no name defined]                                                                                      1iylA02 A:207-451  [code=3.40.630.30, no name defined]                                                                                                                                                                                                CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...............eeeee....hhhhhhhhhhhhhhhh.......eee..hhhhhhhhhh....hhh.eeeeee.....eeeeeeeeeeeeee....eeeeeeeeeeeee.......hhhhhhhhhhhhhhhh.....eeeee.........eeeeeeee.hhhhhhhh.........hhhhhhhhh..........eee....hhhhhhhhhhhhhhhh.eee..hhhhhhhhhhh.........eeeeeee.....eeeeeeeee..eee..........eeeeeeeee......hhhhhhhhhhhhhhhhhhhhh..eeee....hhhhhhhhhh.eeeeeeeeeeee............................... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------NMT_1    ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NMT_2  -------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 1iyl A  68 TPEDVPNDPLPLISDFEWSTLDIDDNLQLDELYKLLYDNYVEDIDATFRFKYSHEFFQWALKPPGWRKDWHVGVRVKSTGKLVAFIAATPVTFKLNKSNKVIDSVEINFLCIHKKLRNKRLAPVLIKEITRRVNKQNIWQALYTGGSILPTPLTTCRYQHRPINWSKLHDVGFSHLPPNQTKSSMVASYTLPNNPKLKGLRPMTGKDVSTVLSLLYKYQERFDIVQLFTEEEFKHWMLGHDENSDSNVVKSYVVEDENGIITDYFSYYLLPFTVLDNAQHDELGIAYLFYYASDSFEKPNYKKRLNELITDALITSKKFGVDVFNCLTCQDNTYFLKDCKFGSGDGFLNYYLFNYRTFPMDGGIDKKTKEVVEDQTSGIGVVLL 451
                                    77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447

Chain B from PDB  Type:PROTEIN  Length:380
 aligned with NMT_CANAL | P30418 from UniProtKB/Swiss-Prot  Length:451

    Alignment length:380
                                    81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451
            NMT_CANAL    72 VPNDPLPLISDFEWSTLDIDDNLQLDELYKLLYDNYVEDIDATFRFKYSHEFFQWALKPPGWRKDWHVGVRVKSTGKLVAFIAATPVTFKLNKSNKVIDSVEINFLCIHKKLRNKRLAPVLIKEITRRVNKQNIWQALYTGGSILPTPLTTCRYQHRPINWSKLHDVGFSHLPPNQTKSSMVASYTLPNNPKLKGLRPMTGKDVSTVLSLLYKYQERFDIVQLFTEEEFKHWMLGHDENSDSNVVKSYVVEDENGVITDYFSYYLLPFTVLDNAQHDELGIAYLFYYASDSFEKPNYKKRLNELITDALITSKKFGVDVFNCLTCQDNTYFLKDCKFGSGDGFLNYYLFNYRTFPMDGGIDKKTKEVVEDQTSGIGVVLL 451
               SCOP domains d1iylb1 B:72-224 N-myristoyl transferase, NMT                                                                                                            d1iylb2 B:225-451 N-myristoyl transferase, NMT                                                                                                                                                                                      SCOP domains
               CATH domains 1iylB01 B:72-206  [code=3.40.630.30, no name defined]                                                                                  1iylB02 B:207-451  [code=3.40.630.30, no name defined]                                                                                                                                                                                                CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...........eeeee....hhhhhhhhhhhhhhhh.......eee....hhhhhhhh....hhh.eeeeee.......eeeeeeeeeeee.hhh...eeeeeeeeee.hhhh...hhhhhhhhhhhhhhh.....eee...........eeeeeeee.hhhhhhhh.........hhhhhhhhhh.........eee.....hhhhhhhhhhhhh...eee..hhhhhhhhhhh.........eeeeeee.....eeeeeeeee..eee.........eeeeeeeeee.hhh..hhhhhhhhhhhhhhhhhhh..eeeeeee...hhhhhhhhhh.eeeeeeee..ee............................... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -----------------------------------------------------------------------------------------------------NMT_1    ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NMT_2  -------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1iyl B  72 VPNDPLPLISDFEWSTLDIDDNLQLDELYKLLYDNYVEDIDATFRFKYSHEFFQWALKPPGWRKDWHVGVRVKSTGKLVAFIAATPVTFKLNKSNKVIDSVEINFLCIHKKLRNKRLAPVLIKEITRRVNKQNIWQALYTGGSILPTPLTTCRYQHRPINWSKLHDVGFSHLPPNQTKSSMVASYTLPNNPKLKGLRPMTGKDVSTVLSLLYKYQERFDIVQLFTEEEFKHWMLGHDENSDSNVVKSYVVEDENGIITDYFSYYLLPFTVLDNAQHDELGIAYLFYYASDSFEKPNYKKRLNELITDALITSKKFGVDVFNCLTCQDNTYFLKDCKFGSGDGFLNYYLFNYRTFPMDGGIDKKTKEVVEDQTSGIGVVLL 451
                                    81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451

Chain C from PDB  Type:PROTEIN  Length:381
 aligned with NMT_CANAL | P30418 from UniProtKB/Swiss-Prot  Length:451

    Alignment length:381
                                    80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450 
            NMT_CANAL    71 DVPNDPLPLISDFEWSTLDIDDNLQLDELYKLLYDNYVEDIDATFRFKYSHEFFQWALKPPGWRKDWHVGVRVKSTGKLVAFIAATPVTFKLNKSNKVIDSVEINFLCIHKKLRNKRLAPVLIKEITRRVNKQNIWQALYTGGSILPTPLTTCRYQHRPINWSKLHDVGFSHLPPNQTKSSMVASYTLPNNPKLKGLRPMTGKDVSTVLSLLYKYQERFDIVQLFTEEEFKHWMLGHDENSDSNVVKSYVVEDENGVITDYFSYYLLPFTVLDNAQHDELGIAYLFYYASDSFEKPNYKKRLNELITDALITSKKFGVDVFNCLTCQDNTYFLKDCKFGSGDGFLNYYLFNYRTFPMDGGIDKKTKEVVEDQTSGIGVVLL 451
               SCOP domains d1iylc1 C:71-224 N-myristoyl transferase, NMT                                                                                                             d1iylc2 C:225-451 N-myristoyl transferase, NMT                                                                                                                                                                                      SCOP domains
               CATH domains 1iylC01 C:71-206  [code=3.40.630.30, no name defined]                                                                                   1iylC02 C:207-451  [code=3.40.630.30, no name defined]                                                                                                                                                                                                CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ............eee......hhhhhhhhhhhhhhhh............hhhhhhhhhh....hhh.eeeeee.....eeeeeeeeeeeeee....eeeeeeeeeeeee........hhhhhhhhhhhhhhh.....eeeeee.......eeeeeeeee.hhhhhhhh.........hhhhhhhhh..........eee....hhhhhhhhhhhhhh...eeee.hhhhhhhhhhh.........eeeeeee.....eeeeeeeee...............eeee...ee......hhhhhhhhhhhhhhhhhhhhh..eeeee...hhhhh......eeeeeeeeeeee............................... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------NMT_1    ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NMT_2  -------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1iyl C  71 DVPNDPLPLISDFEWSTLDIDDNLQLDELYKLLYDNYVEDIDATFRFKYSHEFFQWALKPPGWRKDWHVGVRVKSTGKLVAFIAATPVTFKLNKSNKVIDSVEINFLCIHKKLRNKRLAPVLIKEITRRVNKQNIWQALYTGGSILPTPLTTCRYQHRPINWSKLHDVGFSHLPPNQTKSSMVASYTLPNNPKLKGLRPMTGKDVSTVLSLLYKYQERFDIVQLFTEEEFKHWMLGHDENSDSNVVKSYVVEDENGIITDYFSYYLLPFTVLDNAQHDELGIAYLFYYASDSFEKPNYKKRLNELITDALITSKKFGVDVFNCLTCQDNTYFLKDCKFGSGDGFLNYYLFNYRTFPMDGGIDKKTKEVVEDQTSGIGVVLL 451
                                    80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450

Chain D from PDB  Type:PROTEIN  Length:380
 aligned with NMT_CANAL | P30418 from UniProtKB/Swiss-Prot  Length:451

    Alignment length:380
                                    81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451
            NMT_CANAL    72 VPNDPLPLISDFEWSTLDIDDNLQLDELYKLLYDNYVEDIDATFRFKYSHEFFQWALKPPGWRKDWHVGVRVKSTGKLVAFIAATPVTFKLNKSNKVIDSVEINFLCIHKKLRNKRLAPVLIKEITRRVNKQNIWQALYTGGSILPTPLTTCRYQHRPINWSKLHDVGFSHLPPNQTKSSMVASYTLPNNPKLKGLRPMTGKDVSTVLSLLYKYQERFDIVQLFTEEEFKHWMLGHDENSDSNVVKSYVVEDENGVITDYFSYYLLPFTVLDNAQHDELGIAYLFYYASDSFEKPNYKKRLNELITDALITSKKFGVDVFNCLTCQDNTYFLKDCKFGSGDGFLNYYLFNYRTFPMDGGIDKKTKEVVEDQTSGIGVVLL 451
               SCOP domains d1iyld1 D:72-224 N-myristoyl transferase, NMT                                                                                                            d1iyld2 D:225-451 N-myristoyl transferase, NMT                                                                                                                                                                                      SCOP domains
               CATH domains 1iylD01 D:72-206  [code=3.40.630.30, no name defined]                                                                                  1iylD02 D:207-451  [code=3.40.630.30, no name defined]                                                                                                                                                                                                CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...........eeeee....hhhhhhhhhhhhhhhh........ee...hhhhhhh......hhh.eeeeee.....eeeeeeeeeee..........eeeeeeeeee.hhhh..hhhhhhhhhhhhhhhh....eee................eeee.hhhhhhhhh............hhhhhh...............hhhhhhhhhhhhhhh........hhhhhhhhhh...........ee..............ee....ee........ee..ee............hhhhhhhhhhhhhhhh.......eeee.....hhhhhh..............ee............................... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -----------------------------------------------------------------------------------------------------NMT_1    ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NMT_2  -------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1iyl D  72 VPNDPLPLISDFEWSTLDIDDNLQLDELYKLLYDNYVEDIDATFRFKYSHEFFQWALKPPGWRKDWHVGVRVKSTGKLVAFIAATPVTFKLNKSNKVIDSVEINFLCIHKKLRNKRLAPVLIKEITRRVNKQNIWQALYTGGSILPTPLTTCRYQHRPINWSKLHDVGFSHLPPNQTKSSMVASYTLPNNPKLKGLRPMTGKDVSTVLSLLYKYQERFDIVQLFTEEEFKHWMLGHDENSDSNVVKSYVVEDENGIITDYFSYYLLPFTVLDNAQHDELGIAYLFYYASDSFEKPNYKKRLNELITDALITSKKFGVDVFNCLTCQDNTYFLKDCKFGSGDGFLNYYLFNYRTFPMDGGIDKKTKEVVEDQTSGIGVVLL 451
                                    81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric Unit

Classes(

)

Folds(

)

Superfamilies( (-)

)

Families(

)

Protein Domains( (-)

)

Organisms( (-)

)

Class: Alpha and beta proteins (a+b) (23004)

Fold: Acyl-CoA N-acyltransferases (Nat) (250)

Superfamily: Acyl-CoA N-acyltransferases (Nat) (250)

Family: N-myristoyl transferase, NMT (7)

Protein domain: N-myristoyl transferase, NMT (7)

Yeast (Candida albicans) [TaxId: 5476] (3)

1a	d1iyla1	A:68-224
1b	d1iyla2	A:225-451
1c	d1iylb1	B:72-224
1d	d1iylb2	B:225-451
1e	d1iylc1	C:71-224
1f	d1iylc2	C:225-451
1g	d1iyld1	D:72-224
1h	d1iyld2	D:225-451

Asymmetric Unit

Classes(

)

Architectures( (-)

)

Topologies( (-)

)

Homologous Superfamilies( (-)

)

Organisms( (-)

)

Class: Alpha Beta (26913)

Architecture: 3-Layer(aba) Sandwich (12045)

Topology: Aminopeptidase (284)

Homologous Superfamily: [code=3.40.630.30, no name defined] (126)

Candida albicans. Organism_taxid: 5476. (2)

1a	1iylA01	A:68-206
1b	1iylC02	C:207-451
1c	1iylD02	D:207-451
1d	1iylC01	C:71-206
1e	1iylB01	B:72-206
1f	1iylD01	D:72-206
1g	1iylA02	A:207-451
1h	1iylB02	B:207-451

(no "Pfam Domain" information available for 1IYL)

Asymmetric Unit(hide GO term definitions)

Chain A,B,C,D (NMT_CANAL | P30418)

molecular function
	GO:0008144	drug binding	Interacting selectively and non-covalently with a drug, any naturally occurring or synthetic substance, other than a nutrient, that, when administered or applied to an organism, affects the structure or functioning of the organism; in particular, any such substance used in the diagnosis, prevention, or treatment of disease.
	GO:0004379	glycylpeptide N-tetradecanoyltransferase activity	Catalysis of the reaction: tetradecanoyl-CoA + glycyl-peptide = CoA + N-tetradecanoylglycyl-peptide.
	GO:0016740	transferase activity	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.
	GO:0016746	transferase activity, transferring acyl groups	Catalysis of the transfer of an acyl group from one compound (donor) to another (acceptor).
biological process
	GO:0018008	N-terminal peptidyl-glycine N-myristoylation	The myristoylation of the N-terminal glycine of proteins to form the derivative N-myristoyl-glycine.
	GO:0006499	N-terminal protein myristoylation	The covalent attachment of a myristoyl group to the N-terminal amino acid residue of a protein.
	GO:0009405	pathogenesis	The set of specific processes that generate the ability of an organism to induce an abnormal, generally detrimental state in another organism.
cellular component
	GO:0005737	cytoplasm	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

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	NMT_CANAL \| P30418	:	1iyk 1nmt

1iyk	1IYK CONTAINS THE SAME PROTEIN COMPLEXED WITH PEPTIDIC INHIBITOR.

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (1, 3)

Sites (3, 3)

SS Bonds (0, 0)

Cis Peptide Bonds (1, 1)

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PROSITE Motifs (2, 8)

Exons (0, 0)

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SCOP Domains (1, 8)

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Gene Ontology (8, 8)

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Related Entries

Entries Sharing at Least One Protein Chain (UniProt ID)

Related Entries Specified in the PDB File