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(-) Description

Title :  CRYSTAL STRUCTURE OF CITRATE SYNTHASE FROM THERMUS THERMOPHILUS HB8
 
Authors :  M. Murakami, E. Kanamori, S. Kawaguchi, S. Kuramitsu, T. Kouyama, Rike Structural Genomics/Proteomics Initiative (Rsgi)
Date :  20 Jun 02  (Deposition) - 29 Jul 03  (Release) - 04 Nov 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.30
Chains :  Asym. Unit :  A,B,C,D
Biol. Unit 1:  A,B  (1x)
Biol. Unit 2:  C,D  (1x)
Keywords :  Enzyme-Products Complex, Riken Structural Genomics/Proteomics Initiative, Rsgi, Structural Genomics, Lyase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  E. Kanamori, S. Kawaguchi, S. Kuramitsu, T. Kouyama, M. Murakami
Structural Comparison Between The Open And Closed Forms Of Citrate Synthase From Thermus Thermophilus Hb8
Biophys Physicobio. V. 12 47 2015
PubMed: search  |  Reference-DOI: 10.2142/BIOPHYSICO.12.0_47

(-) Compounds

Molecule 1 - CITRATE SYNTHASE
    Chains: A, B, C, D
    EC Number: 4.1.3.7
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET-3A
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: HB8
    Organism Scientific: THERMUS THERMOPHILUS
    Organism Taxid: 274

 Structural Features

(-) Chains, Units

  1234
Asymmetric Unit : ABCD
Biological Unit 1 (1x): AB  
Biological Unit 2 (1x):   CD

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (4, 22)

Asymmetric Unit (4, 22)
No.NameCountTypeFull Name
1CIT4Ligand/IonCITRIC ACID
2COA4Ligand/IonCOENZYME A
3GOL4Ligand/IonGLYCEROL
4SO410Ligand/IonSULFATE ION
Biological Unit 1 (4, 11)
No.NameCountTypeFull Name
1CIT2Ligand/IonCITRIC ACID
2COA2Ligand/IonCOENZYME A
3GOL2Ligand/IonGLYCEROL
4SO45Ligand/IonSULFATE ION
Biological Unit 2 (4, 11)
No.NameCountTypeFull Name
1CIT2Ligand/IonCITRIC ACID
2COA2Ligand/IonCOENZYME A
3GOL2Ligand/IonGLYCEROL
4SO45Ligand/IonSULFATE ION

(-) Sites  (22, 22)

Asymmetric Unit (22, 22)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREALA B:67 , ARG B:70 , ARG B:71 , ARG C:70 , ARG C:71 , HOH C:559BINDING SITE FOR RESIDUE SO4 C 381
02AC2SOFTWAREILE A:20 , GLY A:185 , PHE A:186 , ARG B:357 , PRO B:358 , GLY B:359 , ALA B:360BINDING SITE FOR RESIDUE SO4 B 382
03AC3SOFTWAREARG A:357 , PRO A:358 , GLY A:359 , ALA A:360 , CYS B:18 , ILE B:20 , GLY B:185 , PHE B:186 , HOH B:641BINDING SITE FOR RESIDUE SO4 B 383
04AC4SOFTWAREARG B:137 , LYS B:142 , ASN B:162BINDING SITE FOR RESIDUE SO4 B 385
05AC5SOFTWAREARG D:70 , ARG D:71BINDING SITE FOR RESIDUE SO4 D 386
06AC6SOFTWAREALA A:67 , ARG A:70 , ARG A:71BINDING SITE FOR RESIDUE SO4 A 387
07AC7SOFTWAREARG C:137 , LYS C:142BINDING SITE FOR RESIDUE SO4 C 388
08AC8SOFTWAREARG C:357 , GLY C:359 , ALA C:360 , ILE D:20 , GLY D:185 , PHE D:186 , HOH D:899BINDING SITE FOR RESIDUE SO4 D 389
09AC9SOFTWAREILE C:20 , GLY C:185 , PHE C:186 , HOH C:893 , ARG D:357 , GLY D:359 , ALA D:360BINDING SITE FOR RESIDUE SO4 C 390
10BC1SOFTWAREARG A:137 , LYS A:142 , ASN A:162 , HOH A:721 , ARG D:137 , LYS D:142 , GLY D:163BINDING SITE FOR RESIDUE SO4 A 391
11BC2SOFTWAREALA A:222 , ARG A:252 , ILE A:253 , GLY A:255 , MET A:256 , GLY A:257 , LYS A:262 , ARG A:305 , ILE A:307 , ASN A:310 , ASP A:312 , CIT A:405 , HOH A:502 , HOH A:788BINDING SITE FOR RESIDUE COA A 401
12BC3SOFTWAREARG A:354 , ARG B:218 , ALA B:222 , ARG B:252 , ILE B:253 , GLY B:255 , MET B:256 , GLY B:257 , HIS B:258 , ARG B:259 , LEU B:302 , ILE B:307 , ASN B:310 , ASP B:312 , CIT B:406 , HOH B:528 , HOH B:601BINDING SITE FOR RESIDUE COA B 402
13BC4SOFTWAREARG C:218 , ALA C:222 , ARG C:252 , ILE C:253 , GLY C:255 , MET C:256 , GLY C:257 , HIS C:258 , ARG C:259 , LEU C:302 , ASN C:310 , ASP C:312 , CIT C:407 , HOH C:769 , ARG D:354BINDING SITE FOR RESIDUE COA C 403
14BC5SOFTWAREARG C:354 , LEU C:355 , GLU D:8 , ARG D:218 , ARG D:252 , ILE D:253 , GLY D:255 , MET D:256 , GLY D:257 , HIS D:258 , ARG D:259 , LEU D:302 , ILE D:307 , ASN D:310 , ASP D:312 , CIT D:408 , HOH D:801 , HOH D:802 , HOH D:944BINDING SITE FOR RESIDUE COA D 404
15BC6SOFTWAREHIS A:184 , ASN A:187 , HIS A:219 , GLY A:220 , HIS A:258 , ARG A:267 , ASP A:312 , ARG A:337 , COA A:401 , HOH A:501 , HOH A:503 , ARG B:357BINDING SITE FOR RESIDUE CIT A 405
16BC7SOFTWAREARG A:357 , HIS B:184 , ASN B:187 , HIS B:219 , GLY B:220 , HIS B:258 , ARG B:267 , VAL B:311 , ASP B:312 , PHE B:333 , ARG B:337 , COA B:402 , HOH B:602 , HOH B:603BINDING SITE FOR RESIDUE CIT B 406
17BC8SOFTWAREHIS C:184 , ASN C:187 , HIS C:219 , GLY C:220 , HIS C:258 , ARG C:267 , ASP C:312 , PHE C:333 , ARG C:337 , COA C:403 , HOH C:702 , HOH C:703 , ARG D:357BINDING SITE FOR RESIDUE CIT C 407
18BC9SOFTWAREARG C:357 , HIS D:184 , ASN D:187 , HIS D:219 , HIS D:258 , ARG D:267 , ASP D:312 , PHE D:333 , ARG D:337 , COA D:404 , HOH D:802 , HOH D:803BINDING SITE FOR RESIDUE CIT D 408
19CC1SOFTWARETYR A:30 , LEU A:51 , HIS A:52 , ARG A:114 , LEU A:346 , GLU A:347 , GLU A:350 , HOH A:891BINDING SITE FOR RESIDUE GOL A 411
20CC2SOFTWARETYR B:30 , LEU B:51 , HIS B:52 , GLY B:53 , ARG B:114 , LEU B:346 , GLU B:347 , GLU B:350BINDING SITE FOR RESIDUE GOL B 412
21CC3SOFTWAREARG C:16 , TYR C:30 , LEU C:51 , HIS C:52 , ARG C:114 , LEU C:346 , GLU C:347 , GLU C:350BINDING SITE FOR RESIDUE GOL C 413
22CC4SOFTWARELEU D:51 , HIS D:52 , ARG D:114BINDING SITE FOR RESIDUE GOL D 414

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1IXE)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 1IXE)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1IXE)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 1IXE)

(-) Exons   (0, 0)

(no "Exon" information available for 1IXE)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:371
 aligned with Q5SIM6_THET8 | Q5SIM6 from UniProtKB/TrEMBL  Length:377

    Alignment length:374
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372    
         Q5SIM6_THET8     3 VARGLEGVLFTESRMCYIDGQQGKLYYYGIPIQELAEKSSFEETTFLLLHGRLPRRQELEEFSAALARRRALPAHLLESFKRYPVSAHPMSFLRTAVSEFGMLDPTEGDISREALYEKGLDLIAKFATIVAANKRLKEGKEPIPPREDLSHAANFLYMANGVEPSPEQARLMDAALILHAEHGFNASTFTAIAAFSTETDLYSAITAAVASLKGPRHGGANEAVMRMIQEIGTPERAREWVREKLAKKERIMGMGHRVYKAFDPRAGVLEKLARLVAEKHGHSKEYQILKIVEEEAGKVLNPRGIYPNVDFYSGVVYSDLGFSLEFFTPIFAVARISGWVGHILEYQELDNRLLRPGAKYVGELDVPYVPLEAR 376
               SCOP domains d1ixea_ A: Citrate synthase                                                                                                                                                                                                                                                                                                                                                            SCOP domains
               CATH domains ----------1ixeA01 A:13-220,A:323-356 Citrate Synthase, domain 1                                                                                                                                                           1ixeA02 A:221-322 Cytochrome P450-Terp, domain 2                                                      1ixeA01 A:13-220,A:323-356        -------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhh..eeeee..eeee....eeee..eehhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhh....hhhhhhhhh......hhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhh...........hhhhhhhhhhhh...hhhhhhhhhhhhhhhh....hhhhhhhhhhhh...hhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhh...............hhhhhhhhhhhhhhhh---hhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhh......eeee.........hhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1ixe A   3 VARGLEGVLFTESRMCYIDGQQGKLYYYGIPIQELAEKSSFEETTFLLLHGRLPRRQELEEFSAALARRRALPAHLLESFKRYPVSAHPMSFLRTAVSEFGMLDPTEGDISREALYEKGLDLIAKFATIVAANKRLKEGKEPIPPREDLSHAANFLYMANGVEPSPEQARLMDAALILHAEHGFNASTFTAIAAFSTETDLYSAITAAVASLKGPRHGGANEAVMRMIQEIGTPERAREWVREKLAKKERIMGMGHRVYKAFDPRAGVLEKLARLVAE---HSKEYQILKIVEEEAGKVLNPRGIYPNVDFYSGVVYSDLGFSLEFFTPIFAVARISGWVGHILEYQELDNRLLRPGAKYVGELDVPYVPLEAR 376
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       | - |     292       302       312       322       332       342       352       362       372    
                                                                                                                                                                                                                                                                                                               280 284                                                                                            


Chain A from PDB  Type:PROTEIN  Length:371
 aligned with Q9LCX9_THETH | Q9LCX9 from UniProtKB/TrEMBL  Length:377

    Alignment length:374
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372    
         Q9LCX9_THETH     3 VARGLEGVLFTESRMCYIDGQQGKLYYYGIPIQELAEKSSFEETTFLLLHGRLPRRQELEEFSAALARRRAMPAHLLESFKRYPVSAHPMSFLRTAVSEFGMLDPTEGDISREALYEKGLDLIAKFATIVAANKRLKEGKEPIPPREDLSHAANFLYMANGVEPSPEQARLMDAALILHAEHGFNASTFTAIAAFSTETDLYSAITAAVASLKGPRHGGANEAVMRMIQEIGTPERAREWVREKLAKKERIMGMGHRVYKAFDPRAGVLEKLARLVAEKHGHSKEYQILKIVEEEAGKVLNPRGIYPNVDFYSGVVYSDLGFSLEFFTPIFAVARISGWVGHILEYQELDNRLLRPGAKYVGELDVPYVPLEAR 376
               SCOP domains d1ixea_ A: Citrate synthase                                                                                                                                                                                                                                                                                                                                                            SCOP domains
               CATH domains ----------1ixeA01 A:13-220,A:323-356 Citrate Synthase, domain 1                                                                                                                                                           1ixeA02 A:221-322 Cytochrome P450-Terp, domain 2                                                      1ixeA01 A:13-220,A:323-356        -------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhh..eeeee..eeee....eeee..eehhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhh....hhhhhhhhh......hhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhh...........hhhhhhhhhhhh...hhhhhhhhhhhhhhhh....hhhhhhhhhhhh...hhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhh...............hhhhhhhhhhhhhhhh---hhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhh......eeee.........hhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1ixe A   3 VARGLEGVLFTESRMCYIDGQQGKLYYYGIPIQELAEKSSFEETTFLLLHGRLPRRQELEEFSAALARRRALPAHLLESFKRYPVSAHPMSFLRTAVSEFGMLDPTEGDISREALYEKGLDLIAKFATIVAANKRLKEGKEPIPPREDLSHAANFLYMANGVEPSPEQARLMDAALILHAEHGFNASTFTAIAAFSTETDLYSAITAAVASLKGPRHGGANEAVMRMIQEIGTPERAREWVREKLAKKERIMGMGHRVYKAFDPRAGVLEKLARLVAE---HSKEYQILKIVEEEAGKVLNPRGIYPNVDFYSGVVYSDLGFSLEFFTPIFAVARISGWVGHILEYQELDNRLLRPGAKYVGELDVPYVPLEAR 376
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       | - |     292       302       312       322       332       342       352       362       372    
                                                                                                                                                                                                                                                                                                               280 284                                                                                            


Chain B from PDB  Type:PROTEIN  Length:370
 aligned with Q5SIM6_THET8 | Q5SIM6 from UniProtKB/TrEMBL  Length:377

    Alignment length:374
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372    
         Q5SIM6_THET8     3 VARGLEGVLFTESRMCYIDGQQGKLYYYGIPIQELAEKSSFEETTFLLLHGRLPRRQELEEFSAALARRRALPAHLLESFKRYPVSAHPMSFLRTAVSEFGMLDPTEGDISREALYEKGLDLIAKFATIVAANKRLKEGKEPIPPREDLSHAANFLYMANGVEPSPEQARLMDAALILHAEHGFNASTFTAIAAFSTETDLYSAITAAVASLKGPRHGGANEAVMRMIQEIGTPERAREWVREKLAKKERIMGMGHRVYKAFDPRAGVLEKLARLVAEKHGHSKEYQILKIVEEEAGKVLNPRGIYPNVDFYSGVVYSDLGFSLEFFTPIFAVARISGWVGHILEYQELDNRLLRPGAKYVGELDVPYVPLEAR 376
               SCOP domains d1ixeb_ B: Citrate synthase                                                                                                                                                                                                                                                                                                                                                            SCOP domains
               CATH domains ----------1ixeB01 B:13-220,B:323-356 Citrate Synthase, domain 1                                                                                                                                                           1ixeB02 B:221-322 Cytochrome P450-Terp, domain 2                                                      1ixeB01 B:13-220,B:323-356        -------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhh..eeeee..eeee....eeee..eehhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhh...hhhhhhhhh......hhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhhhhhh...........hhhhhhhhhhhh...hhhhhhhhhhhhhhhh....hhhhhhhhhhhh...hhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhh...............hhhhhhhhhhhhhhhh----hhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhh......eeee.........hhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1ixe B   3 VARGLEGVLFTESRMCYIDGQQGKLYYYGIPIQELAEKSSFEETTFLLLHGRLPRRQELEEFSAALARRRALPAHLLESFKRYPVSAHPMSFLRTAVSEFGMLDPTEGDISREALYEKGLDLIAKFATIVAANKRLKEGKEPIPPREDLSHAANFLYMANGVEPSPEQARLMDAALILHAEHGFNASTFTAIAAFSTETDLYSAITAAVASLKGPRHGGANEAVMRMIQEIGTPERAREWVREKLAKKERIMGMGHRVYKAFDPRAGVLEKLARLVAE----SKEYQILKIVEEEAGKVLNPRGIYPNVDFYSGVVYSDLGFSLEFFTPIFAVARISGWVGHILEYQELDNRLLRPGAKYVGELDVPYVPLEAR 376
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       | -  |    292       302       312       322       332       342       352       362       372    
                                                                                                                                                                                                                                                                                                               280  285                                                                                           


Chain B from PDB  Type:PROTEIN  Length:370
 aligned with Q9LCX9_THETH | Q9LCX9 from UniProtKB/TrEMBL  Length:377

    Alignment length:374
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372    
         Q9LCX9_THETH     3 VARGLEGVLFTESRMCYIDGQQGKLYYYGIPIQELAEKSSFEETTFLLLHGRLPRRQELEEFSAALARRRAMPAHLLESFKRYPVSAHPMSFLRTAVSEFGMLDPTEGDISREALYEKGLDLIAKFATIVAANKRLKEGKEPIPPREDLSHAANFLYMANGVEPSPEQARLMDAALILHAEHGFNASTFTAIAAFSTETDLYSAITAAVASLKGPRHGGANEAVMRMIQEIGTPERAREWVREKLAKKERIMGMGHRVYKAFDPRAGVLEKLARLVAEKHGHSKEYQILKIVEEEAGKVLNPRGIYPNVDFYSGVVYSDLGFSLEFFTPIFAVARISGWVGHILEYQELDNRLLRPGAKYVGELDVPYVPLEAR 376
               SCOP domains d1ixeb_ B: Citrate synthase                                                                                                                                                                                                                                                                                                                                                            SCOP domains
               CATH domains ----------1ixeB01 B:13-220,B:323-356 Citrate Synthase, domain 1                                                                                                                                                           1ixeB02 B:221-322 Cytochrome P450-Terp, domain 2                                                      1ixeB01 B:13-220,B:323-356        -------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhh..eeeee..eeee....eeee..eehhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhh...hhhhhhhhh......hhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhhhhhh...........hhhhhhhhhhhh...hhhhhhhhhhhhhhhh....hhhhhhhhhhhh...hhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhh...............hhhhhhhhhhhhhhhh----hhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhh......eeee.........hhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1ixe B   3 VARGLEGVLFTESRMCYIDGQQGKLYYYGIPIQELAEKSSFEETTFLLLHGRLPRRQELEEFSAALARRRALPAHLLESFKRYPVSAHPMSFLRTAVSEFGMLDPTEGDISREALYEKGLDLIAKFATIVAANKRLKEGKEPIPPREDLSHAANFLYMANGVEPSPEQARLMDAALILHAEHGFNASTFTAIAAFSTETDLYSAITAAVASLKGPRHGGANEAVMRMIQEIGTPERAREWVREKLAKKERIMGMGHRVYKAFDPRAGVLEKLARLVAE----SKEYQILKIVEEEAGKVLNPRGIYPNVDFYSGVVYSDLGFSLEFFTPIFAVARISGWVGHILEYQELDNRLLRPGAKYVGELDVPYVPLEAR 376
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       | -  |    292       302       312       322       332       342       352       362       372    
                                                                                                                                                                                                                                                                                                               280  285                                                                                           


Chain C from PDB  Type:PROTEIN  Length:366
 aligned with Q5SIM6_THET8 | Q5SIM6 from UniProtKB/TrEMBL  Length:377

    Alignment length:374
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372    
         Q5SIM6_THET8     3 VARGLEGVLFTESRMCYIDGQQGKLYYYGIPIQELAEKSSFEETTFLLLHGRLPRRQELEEFSAALARRRALPAHLLESFKRYPVSAHPMSFLRTAVSEFGMLDPTEGDISREALYEKGLDLIAKFATIVAANKRLKEGKEPIPPREDLSHAANFLYMANGVEPSPEQARLMDAALILHAEHGFNASTFTAIAAFSTETDLYSAITAAVASLKGPRHGGANEAVMRMIQEIGTPERAREWVREKLAKKERIMGMGHRVYKAFDPRAGVLEKLARLVAEKHGHSKEYQILKIVEEEAGKVLNPRGIYPNVDFYSGVVYSDLGFSLEFFTPIFAVARISGWVGHILEYQELDNRLLRPGAKYVGELDVPYVPLEAR 376
               SCOP domains d1ixec_ C: Citrate synthase                                                                                                                                                                                                                                                                                                                                                            SCOP domains
               CATH domains ----------1ixeC01 C:13-220,C:323-356 Citrate Synthase, domain 1                                                                                                                                                           1ixeC02 C:221-322 Cytochrome P450-Terp, domain 2                                                      1ixeC01 C:13-220,C:323-356        -------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhh..eeeee..eeee....eeee..eehhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhh....hhhhhhhhh......hhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhh...........hhhhhhhhhhhh...hhhhhhhhhhhhhhhh....hhhhhhhhhhhh...hhhhhhhhhhhhhh.....hhhhhhhhhhhhhh...hhhhhhhhhhhh...............hhhhhhhhhhhhhh--------.hhhhhhhhhhhhhhhhhhh.......hhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhh......eeee.........hhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1ixe C   3 VARGLEGVLFTESRMCYIDGQQGKLYYYGIPIQELAEKSSFEETTFLLLHGRLPRRQELEEFSAALARRRALPAHLLESFKRYPVSAHPMSFLRTAVSEFGMLDPTEGDISREALYEKGLDLIAKFATIVAANKRLKEGKEPIPPREDLSHAANFLYMANGVEPSPEQARLMDAALILHAEHGFNASTFTAIAAFSTETDLYSAITAAVASLKGPRHGGANEAVMRMIQEIGTPERAREWVREKLAKKERIMGMGHRVYKAFDPRAGVLEKLARLV--------EYQILKIVEEEAGKVLNPRGIYPNVDFYSGVVYSDLGFSLEFFTPIFAVARISGWVGHILEYQELDNRLLRPGAKYVGELDVPYVPLEAR 376
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272     |   -    |  292       302       312       322       332       342       352       362       372    
                                                                                                                                                                                                                                                                                                             278      287                                                                                         


Chain C from PDB  Type:PROTEIN  Length:366
 aligned with Q9LCX9_THETH | Q9LCX9 from UniProtKB/TrEMBL  Length:377

    Alignment length:374
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372    
         Q9LCX9_THETH     3 VARGLEGVLFTESRMCYIDGQQGKLYYYGIPIQELAEKSSFEETTFLLLHGRLPRRQELEEFSAALARRRAMPAHLLESFKRYPVSAHPMSFLRTAVSEFGMLDPTEGDISREALYEKGLDLIAKFATIVAANKRLKEGKEPIPPREDLSHAANFLYMANGVEPSPEQARLMDAALILHAEHGFNASTFTAIAAFSTETDLYSAITAAVASLKGPRHGGANEAVMRMIQEIGTPERAREWVREKLAKKERIMGMGHRVYKAFDPRAGVLEKLARLVAEKHGHSKEYQILKIVEEEAGKVLNPRGIYPNVDFYSGVVYSDLGFSLEFFTPIFAVARISGWVGHILEYQELDNRLLRPGAKYVGELDVPYVPLEAR 376
               SCOP domains d1ixec_ C: Citrate synthase                                                                                                                                                                                                                                                                                                                                                            SCOP domains
               CATH domains ----------1ixeC01 C:13-220,C:323-356 Citrate Synthase, domain 1                                                                                                                                                           1ixeC02 C:221-322 Cytochrome P450-Terp, domain 2                                                      1ixeC01 C:13-220,C:323-356        -------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhh..eeeee..eeee....eeee..eehhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhh....hhhhhhhhh......hhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhh...........hhhhhhhhhhhh...hhhhhhhhhhhhhhhh....hhhhhhhhhhhh...hhhhhhhhhhhhhh.....hhhhhhhhhhhhhh...hhhhhhhhhhhh...............hhhhhhhhhhhhhh--------.hhhhhhhhhhhhhhhhhhh.......hhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhh......eeee.........hhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1ixe C   3 VARGLEGVLFTESRMCYIDGQQGKLYYYGIPIQELAEKSSFEETTFLLLHGRLPRRQELEEFSAALARRRALPAHLLESFKRYPVSAHPMSFLRTAVSEFGMLDPTEGDISREALYEKGLDLIAKFATIVAANKRLKEGKEPIPPREDLSHAANFLYMANGVEPSPEQARLMDAALILHAEHGFNASTFTAIAAFSTETDLYSAITAAVASLKGPRHGGANEAVMRMIQEIGTPERAREWVREKLAKKERIMGMGHRVYKAFDPRAGVLEKLARLV--------EYQILKIVEEEAGKVLNPRGIYPNVDFYSGVVYSDLGFSLEFFTPIFAVARISGWVGHILEYQELDNRLLRPGAKYVGELDVPYVPLEAR 376
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272     |   -    |  292       302       312       322       332       342       352       362       372    
                                                                                                                                                                                                                                                                                                             278      287                                                                                         


Chain D from PDB  Type:PROTEIN  Length:366
 aligned with Q5SIM6_THET8 | Q5SIM6 from UniProtKB/TrEMBL  Length:377

    Alignment length:374
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372    
         Q5SIM6_THET8     3 VARGLEGVLFTESRMCYIDGQQGKLYYYGIPIQELAEKSSFEETTFLLLHGRLPRRQELEEFSAALARRRALPAHLLESFKRYPVSAHPMSFLRTAVSEFGMLDPTEGDISREALYEKGLDLIAKFATIVAANKRLKEGKEPIPPREDLSHAANFLYMANGVEPSPEQARLMDAALILHAEHGFNASTFTAIAAFSTETDLYSAITAAVASLKGPRHGGANEAVMRMIQEIGTPERAREWVREKLAKKERIMGMGHRVYKAFDPRAGVLEKLARLVAEKHGHSKEYQILKIVEEEAGKVLNPRGIYPNVDFYSGVVYSDLGFSLEFFTPIFAVARISGWVGHILEYQELDNRLLRPGAKYVGELDVPYVPLEAR 376
               SCOP domains d1ixed_ D: Citrate synthase                                                                                                                                                                                                                                                                                                                                                            SCOP domains
               CATH domains ----------1ixeD01 D:13-220,D:323-356 Citrate Synthase, domain 1                                                                                                                                                           1ixeD02 D:221-322 Cytochrome P450-Terp, domain 2                                                      1ixeD01 D:13-220,D:323-356        -------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhh..eeeee..eeee....eeee..eehhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhh....hhhhhhhhh......hhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhhhhhh...........hhhhhhhhhhhh...hhhhhhhhhhhhhhhh....hhhhhhhhhhhh...hhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhh...............hhhhhhhhhhhhh--------hhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhh......eeee.........hhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1ixe D   3 VARGLEGVLFTESRMCYIDGQQGKLYYYGIPIQELAEKSSFEETTFLLLHGRLPRRQELEEFSAALARRRALPAHLLESFKRYPVSAHPMSFLRTAVSEFGMLDPTEGDISREALYEKGLDLIAKFATIVAANKRLKEGKEPIPPREDLSHAANFLYMANGVEPSPEQARLMDAALILHAEHGFNASTFTAIAAFSTETDLYSAITAAVASLKGPRHGGANEAVMRMIQEIGTPERAREWVREKLAKKERIMGMGHRVYKAFDPRAGVLEKLARL--------KEYQILKIVEEEAGKVLNPRGIYPNVDFYSGVVYSDLGFSLEFFTPIFAVARISGWVGHILEYQELDNRLLRPGAKYVGELDVPYVPLEAR 376
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272    |    -   |   292       302       312       322       332       342       352       362       372    
                                                                                                                                                                                                                                                                                                            277      286                                                                                          


Chain D from PDB  Type:PROTEIN  Length:366
 aligned with Q9LCX9_THETH | Q9LCX9 from UniProtKB/TrEMBL  Length:377

    Alignment length:374
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372    
         Q9LCX9_THETH     3 VARGLEGVLFTESRMCYIDGQQGKLYYYGIPIQELAEKSSFEETTFLLLHGRLPRRQELEEFSAALARRRAMPAHLLESFKRYPVSAHPMSFLRTAVSEFGMLDPTEGDISREALYEKGLDLIAKFATIVAANKRLKEGKEPIPPREDLSHAANFLYMANGVEPSPEQARLMDAALILHAEHGFNASTFTAIAAFSTETDLYSAITAAVASLKGPRHGGANEAVMRMIQEIGTPERAREWVREKLAKKERIMGMGHRVYKAFDPRAGVLEKLARLVAEKHGHSKEYQILKIVEEEAGKVLNPRGIYPNVDFYSGVVYSDLGFSLEFFTPIFAVARISGWVGHILEYQELDNRLLRPGAKYVGELDVPYVPLEAR 376
               SCOP domains d1ixed_ D: Citrate synthase                                                                                                                                                                                                                                                                                                                                                            SCOP domains
               CATH domains ----------1ixeD01 D:13-220,D:323-356 Citrate Synthase, domain 1                                                                                                                                                           1ixeD02 D:221-322 Cytochrome P450-Terp, domain 2                                                      1ixeD01 D:13-220,D:323-356        -------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhh..eeeee..eeee....eeee..eehhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhh....hhhhhhhhh......hhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhhhhhh...........hhhhhhhhhhhh...hhhhhhhhhhhhhhhh....hhhhhhhhhhhh...hhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhh...............hhhhhhhhhhhhh--------hhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhh......eeee.........hhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1ixe D   3 VARGLEGVLFTESRMCYIDGQQGKLYYYGIPIQELAEKSSFEETTFLLLHGRLPRRQELEEFSAALARRRALPAHLLESFKRYPVSAHPMSFLRTAVSEFGMLDPTEGDISREALYEKGLDLIAKFATIVAANKRLKEGKEPIPPREDLSHAANFLYMANGVEPSPEQARLMDAALILHAEHGFNASTFTAIAAFSTETDLYSAITAAVASLKGPRHGGANEAVMRMIQEIGTPERAREWVREKLAKKERIMGMGHRVYKAFDPRAGVLEKLARL--------KEYQILKIVEEEAGKVLNPRGIYPNVDFYSGVVYSDLGFSLEFFTPIFAVARISGWVGHILEYQELDNRLLRPGAKYVGELDVPYVPLEAR 376
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272    |    -   |   292       302       312       322       332       342       352       362       372    
                                                                                                                                                                                                                                                                                                            277      286
   Legend:   → Mismatch (orange background)
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 4)

Asymmetric Unit
(-)
Class: All alpha proteins (14657)

(-) CATH Domains  (2, 8)

Asymmetric Unit
(-)
Class: Mainly Alpha (13335)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 1IXE)

(-) Gene Ontology  (3, 6)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D   (Q5SIM6_THET8 | Q5SIM6)
molecular function
    GO:0016740    transferase activity    Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.
    GO:0046912    transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer    Catalysis of the transfer of an acyl group from one compound (donor) to another (acceptor), with the acyl group being converted into alkyl on transfer.
cellular component
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

Chain A,B,C,D   (Q9LCX9_THETH | Q9LCX9)
molecular function
    GO:0016740    transferase activity    Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.
    GO:0046912    transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer    Catalysis of the transfer of an acyl group from one compound (donor) to another (acceptor), with the acyl group being converted into alkyl on transfer.
cellular component
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

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(-) Related Entries Specified in the PDB File

1iom 1IOM CONTAINS THE SAME PROTEIN OF THE OPEN FORM. RELATED ID: TTK003000536.2 RELATED DB: TARGETDB