1IQZ - JenaLib

Title :   OXIDIZED [4FE-4S] FERREDOXIN FROM BACILLUS THERMOPROTEOLYTICUS (FORM I)

Authors :   K. Fukuyama, T. Okada, Y. Kakuta, Y. Takahashi

Date :   30 Aug 01 (Deposition) - 13 Feb 02 (Release) - 24 Feb 09 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   0.92

Chains :   Asym./Biol. Unit : A

Keywords :   Ferredoxin, Iron-Sulfer Protein, Ultlahigh Resolution Analysis, Geometry Of [4Fe-4S] Cluster, Electron Transport (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   K. Fukuyama, T. Okada, Y. Kakuta, Y. Takahashi
Atomic Resolution Structures Of Oxidized [4Fe-4S] Ferredoxin From Bacillus Thermoproteolyticus In Two Crystal Forms: Systematic Distortion Of [4Fe-4S] Cluster In The Protein.
J. Mol. Biol. V. 315 1155 2002
PubMed-ID: 11827483 | Reference-DOI: 10.1006/JMBI.2001.5292
(for further references see the PDB file header)

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (2, 2)

Sites (2, 2)

SS Bonds (0, 0)

Cis Peptide Bonds (0, 0)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (1, 1)

Exons (0, 0)

Sequences/Alignments

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Chain A from PDB  Type:PROTEIN  Length:81
 aligned with FER_BACTH | P10245 from UniProtKB/Swiss-Prot  Length:81

    Alignment length:81
                                    10        20        30        40        50        60        70        80 
             FER_BACTH    1 PKYTIVDKETCIACGACGAAAPDIYDYDEDGIAYVTLDDNQGIVEVPDILIDDMMDAFEGCPTDSIKVADEPFDGDPNKFE 81
               SCOP domains d1iqza_ A: Ferredoxin                                                             SCOP domains
               CATH domains 1iqzA00 A:1-81  [code=3.30.70.20, no name defined]                                CATH domains
               Pfam domains --------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeee........hhhhhhh...eee.....eee...........hhhhhhhhhhhhhhh....eeee............ Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -4FE4S_FER_2  PDB: A:2-30     --------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------- Transcript
                  1iqz A  1 PKYTIVDKETCIACGACGAAAPDIYDYDEDGIAYVTLDDNQGIVEVPDILIDDMMDAFEGCPTDSIKVADEPFDGDPNKFE 81
                                    10        20        30        40        50        60        70        80

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Classification and Annotation

SCOP Domains (1, 1)

CATH Domains (1, 1)

Pfam Domains (0, 0)

Gene Ontology (6, 6)

Asymmetric/Biological Unit(hide GO term definitions)

Chain A (FER_BACTH | P10245)

molecular function
	GO:0051539	4 iron, 4 sulfur cluster binding	Interacting selectively and non-covalently with a 4 iron, 4 sulfur (4Fe-4S) cluster; this cluster consists of four iron atoms, with the inorganic sulfur atoms found between the irons and acting as bridging ligands.
	GO:0009055	electron carrier activity	Any molecular entity that serves as an electron acceptor and electron donor in an electron transport chain. An electron transport chain is a process in which a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient.
	GO:0005506	iron ion binding	Interacting selectively and non-covalently with iron (Fe) ions.
	GO:0051536	iron-sulfur cluster binding	Interacting selectively and non-covalently with an iron-sulfur cluster, a combination of iron and sulfur atoms.
	GO:0046872	metal ion binding	Interacting selectively and non-covalently with any metal ion.
biological process
	GO:0055114	oxidation-reduction process	A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.

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