Chain A from PDB Type:PROTEIN Length:482
aligned with CH60_PARDE | Q9Z462 from UniProtKB/Swiss-Prot Length:545
Alignment length:525
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271 281 291 301 311 321 331 341 351 361 371 381 391 401 411 421 431 441 451 461 471 481 491 501 511 521
CH60_PARDE 2 AAKEVKFNSDARDRMLKGVNILADAVKVTLGPKGRNVVIDKSFGAPRITKDGVSVAKEIELSDKFENMGAQMVREVASRTNDEAGDGTTTATVLAQAIVREGLKAVAAGMNPMDLKRGIDVATAKVVEAIKSAARPVNDSSEVAQVGTISANGESFIGQQIAEAMQRVGNEGVITVEENKGMETEVEVVEGMQFDRGYLSPYFVTNADKMIAELEDAYILLHEKKLSSLQPMVPLLESVIQSQKPLLIVAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLQDIAILTGGQVISEDLGMKLENVTIDMLGRAKKVSINKDNTTIVDGAGEKAEIEARVSQIRQQIEETTSDYDREKLQERVAKLAGGVAVIRVGGMTEIEVKERKDRVDDALNATRAAVQEGIVVGGGVALVQGAKVLEGLSGANSDQDAGIAIIRRALEAPMRQIAENAGVDGAVVAGKVRESSDKAFGFNAQTEEYGDMFKFGVIDPAKVVRTALEDAASVAGLLITTEAMIAEKP 526
SCOP domains d1ioka1 A:2-136,A:410-526 GroEL, E domain d1ioka3 A:137-190,A:367-409 GroEL, I domain d1ioka2 A:191-366 GroEL, A domain d1ioka3 A:137-190,A:367-409 GroEL, I domaind1ioka1 A:2-136,A:410-526 GroEL, E domain SCOP domains
CATH domains 1iokA01 A:2-137,A:411-526 GROEL, domain 1 1iokA02 A:138-191,A:373-410 GROEL, domain 2 1iokA03 A:192-372 GroEL 1iokA02 A:138-191,A:373-410 1iokA01 A:2-137,A:411-526 GROEL, domain 1 CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..eeeeehhhhhhhhhhhhhhhhhhhhhhh.....eeee.......eee.hhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhh...........hhhhhhh...hhhhhhhhhhhhhhhh.......ee......eeeee..ee......hhhhh.......eeeeeeeeee..........-----------....eeee....-----------------.eeee.....hhhhhhhhhhhhhhh.---------------....eeeeeeee....eeee....hhhhhhhhhhhhhhhhh.....hhhhhhhhhhhh....eeeeee...hhhhhhhhhhhhhhhhhhhhhhhhhheee..hhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhh.....eeee....eeeehhhhh.eeehhhhhhhhhhhhhhhhhhhheeeeeee.. Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CHAPERONINS_-------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1iok A 2 AAKEVKFNSDARDRMLKGVNILADAVKVTLGPKGRNVVIDKSFGAPRITKDGVSVAKEIELSDKFENMGAQMVREVASRTNDEAGDGTTTATVLAQAIVREGLKAVAAGMNPMDLKRGIDVATAKVVEAIKSAARPVNDSSEVAQVGTISANGESFIGQQIAEAMQRVGNEGVITVEENKGMETEVEVVEGMQFDRGYLSPYFVTNADKMIAELEDAYILLHEKKLSSLQP-----------QKPLLIVAEDVE-----------------IAAVKAPGFGDRRKAMLQDIAILTGG---------------IDMLGRAKKVSINKDNTTIVDGAGEKAEIEARVSQIRQQIEETTSDYDREKLQERVAKLAGGVAVIRVGGMTEIEVKERKDRVDDALNATRAAVQEGIVVGGGVALVQGAKVLEGLSGANSDQDAGIAIIRRALEAPMRQIAENAGVDGAVVAGKVRESSDKAFGFNAQTEEYGDMFKFGVIDPAKVVRTALEDAASVAGLLITTEAMIAEKP 526
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231| - | 251 | - - | 281 291 | - - | 321 331 341 351 361 371 381 391 401 411 421 431 441 451 461 471 481 491 501 511 521
232 244 255 273 298 314
Chain B from PDB Type:PROTEIN Length:482
aligned with CH60_PARDE | Q9Z462 from UniProtKB/Swiss-Prot Length:545
Alignment length:525
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271 281 291 301 311 321 331 341 351 361 371 381 391 401 411 421 431 441 451 461 471 481 491 501 511 521
CH60_PARDE 2 AAKEVKFNSDARDRMLKGVNILADAVKVTLGPKGRNVVIDKSFGAPRITKDGVSVAKEIELSDKFENMGAQMVREVASRTNDEAGDGTTTATVLAQAIVREGLKAVAAGMNPMDLKRGIDVATAKVVEAIKSAARPVNDSSEVAQVGTISANGESFIGQQIAEAMQRVGNEGVITVEENKGMETEVEVVEGMQFDRGYLSPYFVTNADKMIAELEDAYILLHEKKLSSLQPMVPLLESVIQSQKPLLIVAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLQDIAILTGGQVISEDLGMKLENVTIDMLGRAKKVSINKDNTTIVDGAGEKAEIEARVSQIRQQIEETTSDYDREKLQERVAKLAGGVAVIRVGGMTEIEVKERKDRVDDALNATRAAVQEGIVVGGGVALVQGAKVLEGLSGANSDQDAGIAIIRRALEAPMRQIAENAGVDGAVVAGKVRESSDKAFGFNAQTEEYGDMFKFGVIDPAKVVRTALEDAASVAGLLITTEAMIAEKP 526
SCOP domains d1iokb1 B:2-136,B:410-526 GroEL, E domain d1iokb3 B:137-190,B:367-409 GroEL, I domain d1iokb2 B:191-366 GroEL, A domain d1iokb3 B:137-190,B:367-409 GroEL, I domaind1iokb1 B:2-136,B:410-526 GroEL, E domain SCOP domains
CATH domains 1iokB01 B:2-137,B:411-526 GROEL, domain 1 1iokB02 B:138-191,B:373-410 GROEL, domain 2 1iokB03 B:192-372 GroEL 1iokB02 B:138-191,B:373-410 1iokB01 B:2-137,B:411-526 GROEL, domain 1 CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..eeeeehhhhhhhhhhhhhhhhhhhhhhh.....eeee.......eee.hhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhh...........hhhhhhh...hhhhhhhhhhhhhhhh.......ee......eeeee..ee......hhhhh.......eeeeeeeeee..........-----------....eeee....-----------------.eeee.....hhhhhhhhhhhhhhh.---------------....eeeeeeee....eeee....hhhhhhhhhhhhhhhhh.....hhhhhhhhhhhh....eeeeee...hhhhhhhhhhhhhhhhhhhhhhhhhheee..hhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhh.....eeee....eeeehhhhh.eeehhhhhhhhhhhhhhhhhhhheeeeeee.. Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CHAPERONINS_-------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1iok B 2 AAKEVKFNSDARDRMLKGVNILADAVKVTLGPKGRNVVIDKSFGAPRITKDGVSVAKEIELSDKFENMGAQMVREVASRTNDEAGDGTTTATVLAQAIVREGLKAVAAGMNPMDLKRGIDVATAKVVEAIKSAARPVNDSSEVAQVGTISANGESFIGQQIAEAMQRVGNEGVITVEENKGMETEVEVVEGMQFDRGYLSPYFVTNADKMIAELEDAYILLHEKKLSSLQP-----------QKPLLIVAEDVE-----------------IAAVKAPGFGDRRKAMLQDIAILTGG---------------IDMLGRAKKVSINKDNTTIVDGAGEKAEIEARVSQIRQQIEETTSDYDREKLQERVAKLAGGVAVIRVGGMTEIEVKERKDRVDDALNATRAAVQEGIVVGGGVALVQGAKVLEGLSGANSDQDAGIAIIRRALEAPMRQIAENAGVDGAVVAGKVRESSDKAFGFNAQTEEYGDMFKFGVIDPAKVVRTALEDAASVAGLLITTEAMIAEKP 526
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231| - | 251 | - - | 281 291 | - - | 321 331 341 351 361 371 381 391 401 411 421 431 441 451 461 471 481 491 501 511 521
232 244 255 273 298 314
Chain C from PDB Type:PROTEIN Length:482
aligned with CH60_PARDE | Q9Z462 from UniProtKB/Swiss-Prot Length:545
Alignment length:525
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271 281 291 301 311 321 331 341 351 361 371 381 391 401 411 421 431 441 451 461 471 481 491 501 511 521
CH60_PARDE 2 AAKEVKFNSDARDRMLKGVNILADAVKVTLGPKGRNVVIDKSFGAPRITKDGVSVAKEIELSDKFENMGAQMVREVASRTNDEAGDGTTTATVLAQAIVREGLKAVAAGMNPMDLKRGIDVATAKVVEAIKSAARPVNDSSEVAQVGTISANGESFIGQQIAEAMQRVGNEGVITVEENKGMETEVEVVEGMQFDRGYLSPYFVTNADKMIAELEDAYILLHEKKLSSLQPMVPLLESVIQSQKPLLIVAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLQDIAILTGGQVISEDLGMKLENVTIDMLGRAKKVSINKDNTTIVDGAGEKAEIEARVSQIRQQIEETTSDYDREKLQERVAKLAGGVAVIRVGGMTEIEVKERKDRVDDALNATRAAVQEGIVVGGGVALVQGAKVLEGLSGANSDQDAGIAIIRRALEAPMRQIAENAGVDGAVVAGKVRESSDKAFGFNAQTEEYGDMFKFGVIDPAKVVRTALEDAASVAGLLITTEAMIAEKP 526
SCOP domains d1iokc1 C:2-136,C:410-526 GroEL, E domain d1iokc3 C:137-190,C:367-409 GroEL, I domain d1iokc2 C:191-366 GroEL, A domain d1iokc3 C:137-190,C:367-409 GroEL, I domaind1iokc1 C:2-136,C:410-526 GroEL, E domain SCOP domains
CATH domains 1iokC01 C:2-137,C:411-526 GROEL, domain 1 1iokC02 C:138-191,C:373-410 GROEL, domain 2 1iokC03 C:192-372 GroEL 1iokC02 C:138-191,C:373-410 1iokC01 C:2-137,C:411-526 GROEL, domain 1 CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..eeeeehhhhhhhhhhhhhhhhhhhhhhh.....eeee.......eee.hhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhh...........hhhhhhh...hhhhhhhhhhhhhhhh.......ee......eeeee..ee......hhhhh.......eeeeeeeeee..........-----------....eeee....-----------------.eeee.....hhhhhhhhhhhhhhh.---------------....eeeeeeee....eeee....hhhhhhhhhhhhhhhhh.....hhhhhhhhhhhh....eeeeee...hhhhhhhhhhhhhhhhhhhhhhhhhheee..hhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhh.....eeee....eeeehhhhh.eeehhhhhhhhhhhhhhhhhhhheeeeeee.. Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CHAPERONINS_-------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1iok C 2 AAKEVKFNSDARDRMLKGVNILADAVKVTLGPKGRNVVIDKSFGAPRITKDGVSVAKEIELSDKFENMGAQMVREVASRTNDEAGDGTTTATVLAQAIVREGLKAVAAGMNPMDLKRGIDVATAKVVEAIKSAARPVNDSSEVAQVGTISANGESFIGQQIAEAMQRVGNEGVITVEENKGMETEVEVVEGMQFDRGYLSPYFVTNADKMIAELEDAYILLHEKKLSSLQP-----------QKPLLIVAEDVE-----------------IAAVKAPGFGDRRKAMLQDIAILTGG---------------IDMLGRAKKVSINKDNTTIVDGAGEKAEIEARVSQIRQQIEETTSDYDREKLQERVAKLAGGVAVIRVGGMTEIEVKERKDRVDDALNATRAAVQEGIVVGGGVALVQGAKVLEGLSGANSDQDAGIAIIRRALEAPMRQIAENAGVDGAVVAGKVRESSDKAFGFNAQTEEYGDMFKFGVIDPAKVVRTALEDAASVAGLLITTEAMIAEKP 526
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231| - | 251 | - - | 281 291 | - - | 321 331 341 351 361 371 381 391 401 411 421 431 441 451 461 471 481 491 501 511 521
232 244 255 273 298 314
Chain D from PDB Type:PROTEIN Length:482
aligned with CH60_PARDE | Q9Z462 from UniProtKB/Swiss-Prot Length:545
Alignment length:525
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271 281 291 301 311 321 331 341 351 361 371 381 391 401 411 421 431 441 451 461 471 481 491 501 511 521
CH60_PARDE 2 AAKEVKFNSDARDRMLKGVNILADAVKVTLGPKGRNVVIDKSFGAPRITKDGVSVAKEIELSDKFENMGAQMVREVASRTNDEAGDGTTTATVLAQAIVREGLKAVAAGMNPMDLKRGIDVATAKVVEAIKSAARPVNDSSEVAQVGTISANGESFIGQQIAEAMQRVGNEGVITVEENKGMETEVEVVEGMQFDRGYLSPYFVTNADKMIAELEDAYILLHEKKLSSLQPMVPLLESVIQSQKPLLIVAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLQDIAILTGGQVISEDLGMKLENVTIDMLGRAKKVSINKDNTTIVDGAGEKAEIEARVSQIRQQIEETTSDYDREKLQERVAKLAGGVAVIRVGGMTEIEVKERKDRVDDALNATRAAVQEGIVVGGGVALVQGAKVLEGLSGANSDQDAGIAIIRRALEAPMRQIAENAGVDGAVVAGKVRESSDKAFGFNAQTEEYGDMFKFGVIDPAKVVRTALEDAASVAGLLITTEAMIAEKP 526
SCOP domains d1iokd1 D:2-136,D:410-526 GroEL, E domain d1iokd3 D:137-190,D:367-409 GroEL, I domain d1iokd2 D:191-366 GroEL, A domain d1iokd3 D:137-190,D:367-409 GroEL, I domaind1iokd1 D:2-136,D:410-526 GroEL, E domain SCOP domains
CATH domains 1iokD01 D:2-137,D:411-526 GROEL, domain 1 1iokD02 D:138-191,D:373-410 GROEL, domain 2 1iokD03 D:192-372 GroEL 1iokD02 D:138-191,D:373-410 1iokD01 D:2-137,D:411-526 GROEL, domain 1 CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..eeeeehhhhhhhhhhhhhhhhhhhhhhh.....eeee.......eee.hhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhh...........hhhhhhh...hhhhhhhhhhhhhhhh.......ee......eeeee..ee......hhhhh.......eeeeeeeeee..........-----------....eeee....-----------------.eeee.....hhhhhhhhhhhhhhh.---------------....eeeeeeee....eeee....hhhhhhhhhhhhhhhhh.....hhhhhhhhhhhh....eeeeee...hhhhhhhhhhhhhhhhhhhhhhhhhheee..hhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhh.....eeee....eeeehhhhh.eeehhhhhhhhhhhhhhhhhhhheeeeeee.. Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CHAPERONINS_-------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1iok D 2 AAKEVKFNSDARDRMLKGVNILADAVKVTLGPKGRNVVIDKSFGAPRITKDGVSVAKEIELSDKFENMGAQMVREVASRTNDEAGDGTTTATVLAQAIVREGLKAVAAGMNPMDLKRGIDVATAKVVEAIKSAARPVNDSSEVAQVGTISANGESFIGQQIAEAMQRVGNEGVITVEENKGMETEVEVVEGMQFDRGYLSPYFVTNADKMIAELEDAYILLHEKKLSSLQP-----------QKPLLIVAEDVE-----------------IAAVKAPGFGDRRKAMLQDIAILTGG---------------IDMLGRAKKVSINKDNTTIVDGAGEKAEIEARVSQIRQQIEETTSDYDREKLQERVAKLAGGVAVIRVGGMTEIEVKERKDRVDDALNATRAAVQEGIVVGGGVALVQGAKVLEGLSGANSDQDAGIAIIRRALEAPMRQIAENAGVDGAVVAGKVRESSDKAFGFNAQTEEYGDMFKFGVIDPAKVVRTALEDAASVAGLLITTEAMIAEKP 526
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231| - | 251 | - - | 281 291 | - - | 321 331 341 351 361 371 381 391 401 411 421 431 441 451 461 471 481 491 501 511 521
232 244 255 273 298 314
Chain E from PDB Type:PROTEIN Length:482
aligned with CH60_PARDE | Q9Z462 from UniProtKB/Swiss-Prot Length:545
Alignment length:525
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271 281 291 301 311 321 331 341 351 361 371 381 391 401 411 421 431 441 451 461 471 481 491 501 511 521
CH60_PARDE 2 AAKEVKFNSDARDRMLKGVNILADAVKVTLGPKGRNVVIDKSFGAPRITKDGVSVAKEIELSDKFENMGAQMVREVASRTNDEAGDGTTTATVLAQAIVREGLKAVAAGMNPMDLKRGIDVATAKVVEAIKSAARPVNDSSEVAQVGTISANGESFIGQQIAEAMQRVGNEGVITVEENKGMETEVEVVEGMQFDRGYLSPYFVTNADKMIAELEDAYILLHEKKLSSLQPMVPLLESVIQSQKPLLIVAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLQDIAILTGGQVISEDLGMKLENVTIDMLGRAKKVSINKDNTTIVDGAGEKAEIEARVSQIRQQIEETTSDYDREKLQERVAKLAGGVAVIRVGGMTEIEVKERKDRVDDALNATRAAVQEGIVVGGGVALVQGAKVLEGLSGANSDQDAGIAIIRRALEAPMRQIAENAGVDGAVVAGKVRESSDKAFGFNAQTEEYGDMFKFGVIDPAKVVRTALEDAASVAGLLITTEAMIAEKP 526
SCOP domains d1ioke1 E:2-136,E:410-526 GroEL, E domain d1ioke3 E:137-190,E:367-409 GroEL, I domain d1ioke2 E:191-366 GroEL, A domain d1ioke3 E:137-190,E:367-409 GroEL, I domaind1ioke1 E:2-136,E:410-526 GroEL, E domain SCOP domains
CATH domains 1iokE01 E:2-137,E:411-526 GROEL, domain 1 1iokE02 E:138-191,E:373-410 GROEL, domain 2 1iokE03 E:192-372 GroEL 1iokE02 E:138-191,E:373-410 1iokE01 E:2-137,E:411-526 GROEL, domain 1 CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..eeeeehhhhhhhhhhhhhhhhhhhhhhh.....eeee.......eee.hhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhh...........hhhhhhh...hhhhhhhhhhhhhhhh.......ee......eeeee..ee......hhhhh.......eeeeeeeeee..........-----------....eeee....-----------------.eeee.....hhhhhhhhhhhhhhh.---------------....eeeeeeee....eeee....hhhhhhhhhhhhhhhhh.....hhhhhhhhhhhh....eeeeee...hhhhhhhhhhhhhhhhhhhhhhhhhheee..hhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhh.....eeee....eeeehhhhh.eeehhhhhhhhhhhhhhhhhhhheeeeeee.. Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CHAPERONINS_-------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1iok E 2 AAKEVKFNSDARDRMLKGVNILADAVKVTLGPKGRNVVIDKSFGAPRITKDGVSVAKEIELSDKFENMGAQMVREVASRTNDEAGDGTTTATVLAQAIVREGLKAVAAGMNPMDLKRGIDVATAKVVEAIKSAARPVNDSSEVAQVGTISANGESFIGQQIAEAMQRVGNEGVITVEENKGMETEVEVVEGMQFDRGYLSPYFVTNADKMIAELEDAYILLHEKKLSSLQP-----------QKPLLIVAEDVE-----------------IAAVKAPGFGDRRKAMLQDIAILTGG---------------IDMLGRAKKVSINKDNTTIVDGAGEKAEIEARVSQIRQQIEETTSDYDREKLQERVAKLAGGVAVIRVGGMTEIEVKERKDRVDDALNATRAAVQEGIVVGGGVALVQGAKVLEGLSGANSDQDAGIAIIRRALEAPMRQIAENAGVDGAVVAGKVRESSDKAFGFNAQTEEYGDMFKFGVIDPAKVVRTALEDAASVAGLLITTEAMIAEKP 526
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231| - | 251 | - - | 281 291 | - - | 321 331 341 351 361 371 381 391 401 411 421 431 441 451 461 471 481 491 501 511 521
232 244 255 273 298 314
Chain F from PDB Type:PROTEIN Length:482
aligned with CH60_PARDE | Q9Z462 from UniProtKB/Swiss-Prot Length:545
Alignment length:525
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271 281 291 301 311 321 331 341 351 361 371 381 391 401 411 421 431 441 451 461 471 481 491 501 511 521
CH60_PARDE 2 AAKEVKFNSDARDRMLKGVNILADAVKVTLGPKGRNVVIDKSFGAPRITKDGVSVAKEIELSDKFENMGAQMVREVASRTNDEAGDGTTTATVLAQAIVREGLKAVAAGMNPMDLKRGIDVATAKVVEAIKSAARPVNDSSEVAQVGTISANGESFIGQQIAEAMQRVGNEGVITVEENKGMETEVEVVEGMQFDRGYLSPYFVTNADKMIAELEDAYILLHEKKLSSLQPMVPLLESVIQSQKPLLIVAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLQDIAILTGGQVISEDLGMKLENVTIDMLGRAKKVSINKDNTTIVDGAGEKAEIEARVSQIRQQIEETTSDYDREKLQERVAKLAGGVAVIRVGGMTEIEVKERKDRVDDALNATRAAVQEGIVVGGGVALVQGAKVLEGLSGANSDQDAGIAIIRRALEAPMRQIAENAGVDGAVVAGKVRESSDKAFGFNAQTEEYGDMFKFGVIDPAKVVRTALEDAASVAGLLITTEAMIAEKP 526
SCOP domains d1iokf1 F:2-136,F:410-526 GroEL, E domain d1iokf3 F:137-190,F:367-409 GroEL, I domain d1iokf2 F:191-366 GroEL, A domain d1iokf3 F:137-190,F:367-409 GroEL, I domaind1iokf1 F:2-136,F:410-526 GroEL, E domain SCOP domains
CATH domains 1iokF01 F:2-137,F:411-526 GROEL, domain 1 1iokF02 F:138-191,F:373-410 GROEL, domain 2 1iokF03 F:192-372 GroEL 1iokF02 F:138-191,F:373-410 1iokF01 F:2-137,F:411-526 GROEL, domain 1 CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..eeeeehhhhhhhhhhhhhhhhhhhhhhh.....eeee.......eee.hhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhh...........hhhhhhh...hhhhhhhhhhhhhhhh.......ee......eeeee..ee......hhhhh.......eeeeeeeeee..........-----------....eeee....-----------------.eeee.....hhhhhhhhhhhhhhh.---------------....eeeeeeee....eeee....hhhhhhhhhhhhhhhhh.....hhhhhhhhhhhh....eeeeee...hhhhhhhhhhhhhhhhhhhhhhhhhheee..hhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhh.....eeee....eeeehhhhh.eeehhhhhhhhhhhhhhhhhhhheeeeeee.. Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CHAPERONINS_-------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1iok F 2 AAKEVKFNSDARDRMLKGVNILADAVKVTLGPKGRNVVIDKSFGAPRITKDGVSVAKEIELSDKFENMGAQMVREVASRTNDEAGDGTTTATVLAQAIVREGLKAVAAGMNPMDLKRGIDVATAKVVEAIKSAARPVNDSSEVAQVGTISANGESFIGQQIAEAMQRVGNEGVITVEENKGMETEVEVVEGMQFDRGYLSPYFVTNADKMIAELEDAYILLHEKKLSSLQP-----------QKPLLIVAEDVE-----------------IAAVKAPGFGDRRKAMLQDIAILTGG---------------IDMLGRAKKVSINKDNTTIVDGAGEKAEIEARVSQIRQQIEETTSDYDREKLQERVAKLAGGVAVIRVGGMTEIEVKERKDRVDDALNATRAAVQEGIVVGGGVALVQGAKVLEGLSGANSDQDAGIAIIRRALEAPMRQIAENAGVDGAVVAGKVRESSDKAFGFNAQTEEYGDMFKFGVIDPAKVVRTALEDAASVAGLLITTEAMIAEKP 526
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231| - | 251 | - - | 281 291 | - - | 321 331 341 351 361 371 381 391 401 411 421 431 441 451 461 471 481 491 501 511 521
232 244 255 273 298 314
Chain G from PDB Type:PROTEIN Length:482
aligned with CH60_PARDE | Q9Z462 from UniProtKB/Swiss-Prot Length:545
Alignment length:525
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271 281 291 301 311 321 331 341 351 361 371 381 391 401 411 421 431 441 451 461 471 481 491 501 511 521
CH60_PARDE 2 AAKEVKFNSDARDRMLKGVNILADAVKVTLGPKGRNVVIDKSFGAPRITKDGVSVAKEIELSDKFENMGAQMVREVASRTNDEAGDGTTTATVLAQAIVREGLKAVAAGMNPMDLKRGIDVATAKVVEAIKSAARPVNDSSEVAQVGTISANGESFIGQQIAEAMQRVGNEGVITVEENKGMETEVEVVEGMQFDRGYLSPYFVTNADKMIAELEDAYILLHEKKLSSLQPMVPLLESVIQSQKPLLIVAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLQDIAILTGGQVISEDLGMKLENVTIDMLGRAKKVSINKDNTTIVDGAGEKAEIEARVSQIRQQIEETTSDYDREKLQERVAKLAGGVAVIRVGGMTEIEVKERKDRVDDALNATRAAVQEGIVVGGGVALVQGAKVLEGLSGANSDQDAGIAIIRRALEAPMRQIAENAGVDGAVVAGKVRESSDKAFGFNAQTEEYGDMFKFGVIDPAKVVRTALEDAASVAGLLITTEAMIAEKP 526
SCOP domains d1iokg1 G:2-136,G:410-526 GroEL, E domain d1iokg3 G:137-190,G:367-409 GroEL, I domain d1iokg2 G:191-366 GroEL, A domain d1iokg3 G:137-190,G:367-409 GroEL, I domaind1iokg1 G:2-136,G:410-526 GroEL, E domain SCOP domains
CATH domains 1iokG01 G:2-137,G:411-526 GROEL, domain 1 1iokG02 G:138-191,G:373-410 GROEL, domain 2 1iokG03 G:192-372 GroEL 1iokG02 G:138-191,G:373-410 1iokG01 G:2-137,G:411-526 GROEL, domain 1 CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..eeeeehhhhhhhhhhhhhhhhhhhhhhh.....eeee.......eee.hhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhh...........hhhhhhh...hhhhhhhhhhhhhhhh.......ee......eeeee..ee......hhhhh.......eeeeeeeeee..........-----------....eeee....-----------------.eeee.....hhhhhhhhhhhhhhh.---------------....eeeeeeee....eeee....hhhhhhhhhhhhhhhhh.....hhhhhhhhhhhh....eeeeee...hhhhhhhhhhhhhhhhhhhhhhhhhheee..hhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhh.....eeee....eeeehhhhh.eeehhhhhhhhhhhhhhhhhhhheeeeeee.. Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CHAPERONINS_-------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1iok G 2 AAKEVKFNSDARDRMLKGVNILADAVKVTLGPKGRNVVIDKSFGAPRITKDGVSVAKEIELSDKFENMGAQMVREVASRTNDEAGDGTTTATVLAQAIVREGLKAVAAGMNPMDLKRGIDVATAKVVEAIKSAARPVNDSSEVAQVGTISANGESFIGQQIAEAMQRVGNEGVITVEENKGMETEVEVVEGMQFDRGYLSPYFVTNADKMIAELEDAYILLHEKKLSSLQP-----------QKPLLIVAEDVE-----------------IAAVKAPGFGDRRKAMLQDIAILTGG---------------IDMLGRAKKVSINKDNTTIVDGAGEKAEIEARVSQIRQQIEETTSDYDREKLQERVAKLAGGVAVIRVGGMTEIEVKERKDRVDDALNATRAAVQEGIVVGGGVALVQGAKVLEGLSGANSDQDAGIAIIRRALEAPMRQIAENAGVDGAVVAGKVRESSDKAFGFNAQTEEYGDMFKFGVIDPAKVVRTALEDAASVAGLLITTEAMIAEKP 526
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231| - | 251 | - - | 281 291 | - - | 321 331 341 351 361 371 381 391 401 411 421 431 441 451 461 471 481 491 501 511 521
232 244 255 273 298 314
Legend: |
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→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |