1I3L - JenaLib

Asym./Biol. Unit (Jmol Viewer)

Asym./Biol. Unit - sites (Jmol Viewer)

Title :   MOLECULAR BASIS FOR SEVERE EPIMERASE-DEFICIENCY GALACTOSEMIA: X-RAY STRUCTURE OF THE HUMAN V94M-SUBSTITUTED UDP-GALACTOSE 4-EPIMERASE

Authors :   J. B. Thoden, T. M. Wohlers, J. L. Fridovich-Keil, H. M. Holden

Date :   15 Feb 01 (Deposition) - 20 Jun 01 (Release) - 24 Feb 09 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   1.50

Chains :   Asym./Biol. Unit : A,B

Keywords :   Epimerase Galactosemia Short-Chain Dehydrogenase, Isomerase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   J. B. Thoden, T. M. Wohlers, J. L. Fridovich-Keil, H. M. Holden
Molecular Basis For Severe Epimerase Deficiency Galactosemia. X-Ray Structure Of The Human V94M-Substituted Udp-Galactose 4-Epimerase.
J. Biol. Chem. V. 276 20617 2001
PubMed-ID: 11279193 | Reference-DOI: 10.1074/JBC.M101304200
(for further references see the PDB file header)

Molecule 1 - UDP-GLUCOSE 4-EPIMERASE
	Chains	:	A, B
	EC Number	:	5.1.3.2
	Engineered	:	YES
	Expression System	:	PICHIA PASTORIS
	Expression System Plasmid	:	PPIC3.5KHGALE
	Expression System Taxid	:	4922
	Expression System Vector Type	:	PLASMID
	Gene	:	HGALE
	Mutation	:	YES
	Organism Common	:	HUMAN
	Organism Scientific	:	HOMO SAPIENS
	Organism Taxid	:	9606
	Synonym	:	UDP-GALACTOSE 4-EPIMERASE

		1	2
Asymmetric/Biological Unit	:	A	B

Summary Information (see also Sequences/Alignments below)

Asymmetric/Biological Unit (5, 10)

No.	Name	Count	Type	Full Name
1	CL	3	Ligand/Ion	CHLORIDE ION
2	EDO	2	Ligand/Ion	1,2-ETHANEDIOL
3	GDU	2	Ligand/Ion	GALACTOSE-URIDINE-5'-DIPHOSPHATE
4	MG	1	Ligand/Ion	MAGNESIUM ION
5	NAD	2	Ligand/Ion	NICOTINAMIDE-ADENINE-DINUCLEOTIDE

Asymmetric Unit (10, 10)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	ASN A:155 , ASN A:187 , ASN A:206 , ASN A:207 , LEU A:208 , ASN A:224 , VAL A:225 , PHE A:226 , GLY A:237 , ARG A:239 , TYR A:241 , VAL A:277 , ARG A:300 , ASP A:303 , HOH A:1145 , HOH A:1322 , HOH A:1374 , HOH A:1397 , HOH A:1551 , HOH A:1968	BINDING SITE FOR RESIDUE GDU A 401
02	AC2	SOFTWARE	ALA B:93 , THR B:134 , ASN B:187 , ASN B:206 , ASN B:207 , LEU B:208 , ASN B:224 , VAL B:225 , PHE B:226 , GLY B:237 , ARG B:239 , TYR B:241 , VAL B:277 , ARG B:300 , ASP B:303 , HOH B:1107 , HOH B:1111 , HOH B:1367 , HOH B:1764 , HOH B:1976	BINDING SITE FOR RESIDUE GDU B 901
03	AC3	SOFTWARE	LYS A:100 , PRO A:101 , LEU A:102 , LYS B:120 , HOH B:1421	BINDING SITE FOR RESIDUE CL A 990
04	AC4	SOFTWARE	HOH A:1571 , PRO B:101 , LEU B:102	BINDING SITE FOR RESIDUE CL B 991
05	AC5	SOFTWARE	GLY B:270 , PRO B:311 , TRP B:320 , THR B:321 , ALA B:322 , HOH B:1139 , HOH B:1261	BINDING SITE FOR RESIDUE CL B 992
06	AC6	SOFTWARE	SER A:312 , HOH A:1642 , HOH A:1702 , HOH A:1703 , HOH B:1408 , HOH B:1446	BINDING SITE FOR RESIDUE MG A 993
07	AC7	SOFTWARE	GLY A:9 , GLY A:12 , TYR A:13 , ILE A:14 , ASP A:33 , ASN A:34 , PHE A:35 , HIS A:36 , ASN A:37 , ALA A:38 , MET A:65 , ASP A:66 , ILE A:67 , PHE A:88 , ALA A:89 , GLY A:90 , LYS A:92 , VAL A:107 , SER A:130 , SER A:131 , SER A:132 , TYR A:157 , LYS A:161 , TYR A:185 , PRO A:188 , HOH A:1119 , HOH A:1120 , HOH A:1138 , HOH A:1161 , HOH A:1364 , HOH A:1388 , HOH A:1394 , HOH A:1478 , HOH A:1578 , HOH A:1970	BINDING SITE FOR RESIDUE NAD A 400
08	AC8	SOFTWARE	GLY B:9 , GLY B:12 , TYR B:13 , ILE B:14 , ASP B:33 , ASN B:34 , HIS B:36 , ASN B:37 , MET B:65 , ASP B:66 , ILE B:67 , PHE B:88 , ALA B:89 , GLY B:90 , LYS B:92 , SER B:130 , SER B:131 , SER B:132 , TYR B:157 , LYS B:161 , TYR B:185 , PRO B:188 , HOH B:1105 , HOH B:1109 , HOH B:1117 , HOH B:1134 , HOH B:1146 , HOH B:1150 , HOH B:1535	BINDING SITE FOR RESIDUE NAD B 900
09	AC9	SOFTWARE	GLY A:42 , GLY A:43	BINDING SITE FOR RESIDUE EDO A 980
10	BC1	SOFTWARE	ILE B:204 , HOH B:1296 , HOH B:1363	BINDING SITE FOR RESIDUE EDO B 981

(no "SS Bond" information available for 1I3L)

Asymmetric/Biological Unit

No.	Residues
1	Leu A:142	-	Pro A:143
2	Leu B:142	-	Pro B:143

Asymmetric/Biological Unit (17, 34)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
01	UniProt	VAR_037733	A	25	V	GALE_HUMAN	Disease (EDG)	---	A/B	A	25	V
02	UniProt	VAR_002539	N	34	S	GALE_HUMAN	Disease (EDG)	121908046	A/B	N	34	S
03	UniProt	VAR_037734	R	40	C	GALE_HUMAN	Disease (EDG)	144492228	A/B	R	40	C
04	UniProt	VAR_037735	D	69	E	GALE_HUMAN	Disease (EDG)	---	A/B	D	69	E
05	UniProt	VAR_002540	G	90	E	GALE_HUMAN	Disease (EDG)	28940882	A/B	G	90	E
06	UniProt	VAR_010058	V	94	M	GALE_HUMAN	Disease (EDG)	121908047	A/B	M	94	M
07	UniProt	VAR_002541	D	103	G	GALE_HUMAN	Disease (EDG)	28940883	A/B	D	103	G
08	UniProt	VAR_037736	E	165	K	GALE_HUMAN	Disease (EDG)	528467258	A/B	E	165	K
09	UniProt	VAR_037737	R	169	W	GALE_HUMAN	Disease (EDG)	137853859	A/B	R	169	W
10	UniProt	VAR_002542	A	180	V	GALE_HUMAN	Polymorphism	3204468	A/B	V	180	V
11	UniProt	VAR_002543	L	183	P	GALE_HUMAN	Disease (EDG)	121908045	A/B	L	183	P
12	UniProt	VAR_037738	R	239	W	GALE_HUMAN	Disease (EDG)	137853860	A/B	R	239	W
13	UniProt	VAR_002544	K	257	R	GALE_HUMAN	Disease (EDG)	28940884	A/B	K	257	R
14	UniProt	VAR_037739	G	302	D	GALE_HUMAN	Disease (EDG)	137853861	A/B	G	302	D
15	UniProt	VAR_002545	L	313	M	GALE_HUMAN	Disease (EDG)	3180383	A/B	L	313	M
16	UniProt	VAR_002546	G	319	E	GALE_HUMAN	Disease (EDG)	28940885	A/B	G	319	E
17	UniProt	VAR_037740	R	335	H	GALE_HUMAN	Disease (EDG)	368637540	A/B	R	335	H

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

(no "PROSITE Motif" information available for 1I3L)

Asymmetric/Biological Unit (10, 20)

	ENSEMBL					UniProtKB			PDB
No.	Transcript ID	Exon	Exon ID	Genome Location	Length	ID	Location	Length	Count	Location	Length
1.1j	ENST00000374497	1j	ENSE00001850298	chr1:24126892-24126877	16	GALE_HUMAN	-	0	0	-	-
1.1n	ENST00000374497	1n	ENSE00001372948	chr1:24125926-24125856	71	GALE_HUMAN	-	0	0	-	-
1.2b	ENST00000374497	2b	ENSE00002180266	chr1:24125502-24125377	126	GALE_HUMAN	1-41	41	2	A:2-41 B:2-41	40 40
1.2e	ENST00000374497	2e	ENSE00001691927	chr1:24125220-24125105	116	GALE_HUMAN	41-79	39	2	A:41-79 B:41-79	39 39
1.2h	ENST00000374497	2h	ENSE00000758318	chr1:24124720-24124607	114	GALE_HUMAN	80-117	38	2	A:80-117 B:80-117	38 38
1.3b	ENST00000374497	3b	ENSE00000758319	chr1:24124361-24124185	177	GALE_HUMAN	118-176	59	2	A:118-176 B:118-176	59 59
1.4d	ENST00000374497	4d	ENSE00000758320	chr1:24123637-24123524	114	GALE_HUMAN	177-214	38	2	A:177-214 B:177-214	38 38
1.5	ENST00000374497	5	ENSE00000758321	chr1:24123432-24123366	67	GALE_HUMAN	215-237	23	2	A:215-237 B:215-237	23 23
1.6a	ENST00000374497	6a	ENSE00000758322	chr1:24123272-24123187	86	GALE_HUMAN	237-265	29	2	A:237-265 B:237-265	29 29
1.6d	ENST00000374497	6d	ENSE00002163869	chr1:24123076-24122999	78	GALE_HUMAN	266-291	26	2	A:266-291 B:266-291	26 26
1.6e	ENST00000374497	6e	ENSE00002170745	chr1:24122755-24122641	115	GALE_HUMAN	292-330	39	2	A:292-330 B:292-330	39 39
1.6h	ENST00000374497	6h	ENSE00001893164	chr1:24122497-24122090	408	GALE_HUMAN	330-348	19	2	A:330-348 B:330-346	19 17

Asymmetric/Biological Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:347
 aligned with GALE_HUMAN | Q14376 from UniProtKB/Swiss-Prot  Length:348

    Alignment length:347
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       
           GALE_HUMAN     2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKVVARREGDVAACYANPSLAQEELGWTAALGLDRMCEDLWRWQKQNPSGFGTQA 348
               SCOP domains d1i3la_ A: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)                                                                                                                                                                                                                                                                               SCOP domains
               CATH domains -1i3lA02 A:3-189,A:240-270 NAD(P)-binding Rossmann-like Domain                                                                                                                              1i3lA01 A:190-239,A:271-346                       1i3lA02 A:3-189,A:240-270      1i3lA01 A:190-239,A:271-346 UDP-galactose 4-epimerase, domain 1             -- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeee...hhhhhhhhhhhhhh...eeeee............hhhhhhhhhhhh...eeee....hhhhhhhhhhhh.eeeeee............hhhhhhhhhhhhhhhhhhhhhhh...eeeeeee.hhhh.................hhhhhhhhhhhhhhhhhhhhh...eeeeeee.eee.................hhhhhhhhhhh.....eeee...........ee.eeehhhhhhhhhhhhhhhh....eeeeee.....eehhhhhhhhhhhhh....eeee........ee...hhhhhhh.......hhhhhhhhhhhhhhhh........ Sec.struct. author
                 SAPs(SNPs) -----------------------V--------S-----C----------------------------E--------------------E---M--------G-------------------------------------------------------------K---W----------V--P-------------------------------------------------------W-----------------R--------------------------------------------D----------M-----E---------------H------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.2b  PDB: A:2-41 UniProt: 1-41    --------------------------------------Exon 1.2h  PDB: A:80-117              Exon 1.3b  PDB: A:118-176 UniProt: 118-176                 Exon 1.4d  PDB: A:177-214             Exon 1.5  PDB: A:215-23----------------------------Exon 1.6d  PDB: A:266-291 Exon 1.6e  PDB: A:292-330              ------------------ Transcript 1 (1)
           Transcript 1 (2) ---------------------------------------Exon 1.2e  PDB: A:41-79 UniProt: 41-79 -------------------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.6a  PDB: A:237-265    ----------------------------------------------------------------Exon 1.6h           Transcript 1 (2)
                 1i3l A   2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYSFMAVIHFAGLKAMGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNVVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKVVARREGDVAACYANPSLAQEELGWTAALGLDRMCEDLWRWQKQNPSGFGTQA 348
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341

Chain B from PDB  Type:PROTEIN  Length:345
 aligned with GALE_HUMAN | Q14376 from UniProtKB/Swiss-Prot  Length:348

    Alignment length:345
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341     
           GALE_HUMAN     2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKVVARREGDVAACYANPSLAQEELGWTAALGLDRMCEDLWRWQKQNPSGFGT 346
               SCOP domains d1i3lb_ B: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)                                                                                                                                                                                                                                                                             SCOP domains
               CATH domains -1i3lB02 B:3-189,B:240-270 NAD(P)-binding Rossmann-like Domain                                                                                                                              1i3lB01 B:190-239,B:271-346                       1i3lB02 B:3-189,B:240-270      1i3lB01 B:190-239,B:271-346 UDP-galactose 4-epimerase, domain 1              CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeee...hhhhhhhhhhhhhh...eeeee............hhhhhhhhhhhh...eeee....hhhhhhhhhhhh.eeeeee............hhhhhhhhhhhhhhhhhhhhhhh...eeeeeee.hhhh.................hhhhhhhhhhhhhhhhhhhhh...eeeeeee.eee.................hhhhhhhhhhh.....eeee...........ee.eeehhhhhhhhhhhhhhhh....eeeeee.....eehhhhhhhhhhhhh....eeee........ee...hhhhhhhh......hhhhhhhhhhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) -----------------------V--------S-----C----------------------------E--------------------E---M--------G-------------------------------------------------------------K---W----------V--P-------------------------------------------------------W-----------------R--------------------------------------------D----------M-----E---------------H----------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.2b  PDB: B:2-41 UniProt: 1-41    --------------------------------------Exon 1.2h  PDB: B:80-117              Exon 1.3b  PDB: B:118-176 UniProt: 118-176                 Exon 1.4d  PDB: B:177-214             Exon 1.5  PDB: B:215-23----------------------------Exon 1.6d  PDB: B:266-291 Exon 1.6e  PDB: B:292-330              ---------------- Transcript 1 (1)
           Transcript 1 (2) ---------------------------------------Exon 1.2e  PDB: B:41-79 UniProt: 41-79 -------------------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.6a  PDB: B:237-265    ----------------------------------------------------------------Exon 1.6h         Transcript 1 (2)
                 1i3l B   2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYSFMAVIHFAGLKAMGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNVVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKVVARREGDVAACYANPSLAQEELGWTAALGLDRMCEDLWRWQKQNPSGFGT 346
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric/Biological Unit

Classes(

)

Folds(

)

Superfamilies( (-)

)

Families(

)

Protein Domains( (-)

)

Organisms( (-)

)

Class: Alpha and beta proteins (a/b) (23833)

Fold: NAD(P)-binding Rossmann-fold domains (1604)

Superfamily: NAD(P)-binding Rossmann-fold domains (1604)

Family: Tyrosine-dependent oxidoreductases (503)

Protein domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) (26)

Human (Homo sapiens) [TaxId: 9606] (7)

1a	d1i3la_	A:
1b	d1i3lb_	B:

Asymmetric/Biological Unit

Classes(

)

Architectures( (-)

)

Topologies( (-)

)

Homologous Superfamilies( (-)

)

Organisms( (-)

)

Class: Alpha Beta (26913)

Architecture: 3-Layer(aba) Sandwich (12045)

Topology: Rossmann fold (7312)

Homologous Superfamily: NAD(P)-binding Rossmann-like Domain (1244)

Human (Homo sapiens) (188)

1a	1i3lA02	A:3-189,A:240-270
1b	1i3lB02	B:3-189,B:240-270

Architecture: Alpha-Beta Complex (3881)

Topology: UDP-galactose 4-epimerase; domain 1 (99)

Homologous Superfamily: UDP-galactose 4-epimerase, domain 1 (99)

Human (Homo sapiens) (8)

2a	1i3lA01	A:190-239,A:271-346
2b	1i3lB01	B:190-239,B:271-346

(no "Pfam Domain" information available for 1I3L)

Asymmetric/Biological Unit(hide GO term definitions)

Chain A,B (GALE_HUMAN | Q14376)

molecular function
	GO:0003974	UDP-N-acetylglucosamine 4-epimerase activity	Catalysis of the reaction: UDP-N-acetyl-D-glucosamine = UDP-N-acetyl-D-galactosamine.
	GO:0003978	UDP-glucose 4-epimerase activity	Catalysis of the reaction: UDP-glucose = UDP-galactose.
	GO:0016853	isomerase activity	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5.
	GO:0042803	protein homodimerization activity	Interacting selectively and non-covalently with an identical protein to form a homodimer.
	GO:0016857	racemase and epimerase activity, acting on carbohydrates and derivatives	Catalysis of a reaction that alters the configuration of one or more chiral centers in a carbohydrate molecule.
biological process
	GO:0005975	carbohydrate metabolic process	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
	GO:0019388	galactose catabolic process	The chemical reactions and pathways resulting in the breakdown of galactose, the aldohexose galacto-hexose.
	GO:0006012	galactose metabolic process	The chemical reactions and pathways involving galactose, the aldohexose galacto-hexose. D-galactose is widely distributed in combined form in plants, animals and microorganisms as a constituent of oligo- and polysaccharides; it also occurs in galactolipids and as its glucoside in lactose and melibiose.
cellular component
	GO:0005829	cytosol	The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
	GO:0070062	extracellular exosome	A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm.

Asymmetric/Biological Unit
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	Cis Peptide Bonds
		Leu A:142 - Pro A:143	[ RasMol ]
		Leu B:142 - Pro B:143	[ RasMol ]

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Access by PDB/NDB ID
	1i3l
		Family and Domain Information	:	ProDom \| SYSTERS
		General Structural Information	:	GlycoscienceDB \| MMDB \| NDB \| OCA \| PDB \| PDBe \| PDBj \| PDBsum \| PDBWiki \| PQS \| PROTEOPEDIA
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Access by UniProt ID/Accession number
	GALE_HUMAN \| Q14376
		Comparative Protein Structure Models	:	ModBase
		Genomic Information	:	Ensembl
		Protein-protein Interaction	:	DIP
		Sequence, Family and Domain Information	:	InterPro \| Pfam \| SMART \| UniProtKB/SwissProt

Access by Enzyme Classificator (EC Number)
	5.1.3.2
		General Enzyme Information	:	BRENDA \| EC-PDB \| Enzyme \| IntEnz
		Pathway	:	KEGG \| MetaCyc

Access by Disease Identifier (MIM ID)
	230350
		Disease Information	:	OMIM

Access by GenAge ID
	(no 'GenAge ID' available)
		Age Related Information	:	GenAge

Access by PDB/NDB ID
		Domain Information	:	XDom
		Interatomic Contacts of Structural Units	:	CSU
		Ligand-protein Contacts	:	LPC
		Protein Cavities	:	castP
		Sequence and Secondary Structure	:	PDBCartoon
		Structure Alignment	:	STRAP(Java WebStart application, automatic local installation, requires Java; full application with system access!)
		Structure and Sequence Browser	:	STING

Access by UniProt ID/Accession number
	GALE_HUMAN \| Q14376
		Protein Disorder Prediction	:	DisEMBL \| FoldIndex \| GLOBPLOT (for more information see DisProt)

UniProtKB/Swiss-Prot
	GALE_HUMAN \| Q14376	:	1ek5 1ek6 1hzj 1i3k 1i3m 1i3n

1i3k	MOLECULAR BASIS FOR SEVERE EPIMERASE-DEFICIENCY GALACTOSEMIA: X-RAY STRUCTURE OF THE HUMAN V94M-SUBSTITUTED UDP-GALACTOSE 4-EPIMERASE
1i3m	MOLECULAR BASIS FOR SEVERE EPIMERASE-DEFICIENCY GALACTOSEMIA: X-RAY STRUCTURE OF THE HUMAN V94M-SUBSTITUTED UDP-GALACTOSE 4-EPIMERASE
1i3n	MOLECULAR BASIS FOR SEVERE EPIMERASE-DEFICIENCY GALACTOSEMIA: X-RAY STRUCTURE OF THE HUMAN V94M-SUBSTIRUTED UDP-GALACTOSE 4-EPIMERASE

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (5, 10)

Sites (10, 10)

SS Bonds (0, 0)

Cis Peptide Bonds (2, 2)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (17, 34)

PROSITE Motifs (0, 0)

Exons (10, 20)

Sequences/Alignments

Classification and Annotation

SCOP Domains (1, 2)

CATH Domains (2, 4)

Pfam Domains (0, 0)

Gene Ontology (10, 10)

Visualization

Interactive Views

Still Images

Databases and Analysis Tools

Databases

Analysis Tools

Related Entries

Entries Sharing at Least One Protein Chain (UniProt ID)

Related Entries Specified in the PDB File