1HQZ - JenaLib

Asymmetric Unit (Jmol Viewer)

Biological Unit 1 (Jmol Viewer)

Biological Unit 2 (Jmol Viewer)

Biological Unit 3 (Jmol Viewer)

Biological Unit 4 (Jmol Viewer)

Biological Unit 5 (Jmol Viewer)

Biological Unit 6 (Jmol Viewer)

Biological Unit 7 (Jmol Viewer)

Biological Unit 8 (Jmol Viewer)

Biological Unit 9 (Jmol Viewer)

Biological Unit 10 (Jmol Viewer)

Title :   COFILIN HOMOLOGY DOMAIN OF A YEAST ACTIN-BINDING PROTEIN ABP1P

Authors :   B. V. Strokopytov, A. A. Fedorov, N. Mahoney, D. G. Drubin, S. C. Almo, S. New York Sgx Research Center For Structural Genomics (Nysgx

Date :   20 Dec 00 (Deposition) - 21 Dec 01 (Release) - 16 Nov 11 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.10

Chains :   Asym. Unit : 1,2,3,4,5,6,7,8,9
Biol. Unit 1: 1  (1x)
Biol. Unit 2: 2  (1x)
Biol. Unit 3: 3  (1x)
Biol. Unit 4: 4  (1x)
Biol. Unit 5: 5  (1x)
Biol. Unit 6: 6  (1x)
Biol. Unit 7: 7  (1x)
Biol. Unit 8: 8  (1x)
Biol. Unit 9: 9  (1x)
Biol. Unit 10: 9  (2x)

Keywords :   Cofilin Homology Domain, Actin Binding, New York Sgx Research Center For Structural Genomics, Nysgxrc, Structural Genomics, Psi, Protein Structure Initiative, Structural Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   B. V. Strokopytov, A. Fedorov, N. M. Mahoney, M. Kessels, D. G. Drubin, S. C. Almo
Phased Translation Function Revisited: Structure Solution O The Cofilin-Homology Domain From Yeast Actin-Binding Protei 1 Using Six-Dimensional Searches.
Acta Crystallogr. , Sect. D V. 61 285 2005
PubMed-ID: 15735338 | Reference-DOI: 10.1107/S0907444904033037
(for further references see the PDB file header)

Molecule 1 - ACTIN-BINDING PROTEIN
	Chains	:	1, 2, 3, 4, 5, 6, 7, 8, 9
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Taxid	:	562
	Fragment	:	N-TERMINAL DOMAIN, RESIDUES 1-141
	Organism Common	:	BAKER'S YEAST
	Organism Scientific	:	SACCHAROMYCES CEREVISIAE
	Organism Taxid	:	4932
	Synonym	:	ABP1P

		1	2	3	4	5	6	7	8	9
Asymmetric Unit	:	1	2	3	4	5	6	7	8	9
Biological Unit 1 (1x)	:	1
Biological Unit 2 (1x)	:		2
Biological Unit 3 (1x)	:			3
Biological Unit 4 (1x)	:				4
Biological Unit 5 (1x)	:					5
Biological Unit 6 (1x)	:						6
Biological Unit 7 (1x)	:							7
Biological Unit 8 (1x)	:								8
Biological Unit 9 (1x)	:									9
Biological Unit 10 (2x)	:									9

Summary Information (see also Sequences/Alignments below)

(no "Ligand,Modified Residues,Ions" information available for 1HQZ)

(no "Site" information available for 1HQZ)

(no "SS Bond" information available for 1HQZ)

(no "Cis Peptide Bond" information available for 1HQZ)

(no "SAP(SNP)/Variant" information available for 1HQZ)

Asymmetric Unit (1, 9)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	ADF_H	PS51263	ADF-H domain profile.	ABP1_YEAST	7-136	9	1:7-136 2:7-136 3:7-136 4:7-136 5:7-136 6:7-136 7:7-135 8:7-136 9:7-136

Biological Unit 1 (1, 1)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	ADF_H	PS51263	ADF-H domain profile.	ABP1_YEAST	7-136	1	1:7-136 - - - - - - - -

Biological Unit 2 (1, 1)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	ADF_H	PS51263	ADF-H domain profile.	ABP1_YEAST	7-136	1	- 2:7-136 - - - - - - -

Biological Unit 3 (1, 1)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	ADF_H	PS51263	ADF-H domain profile.	ABP1_YEAST	7-136	1	- - 3:7-136 - - - - - -

Biological Unit 4 (1, 1)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	ADF_H	PS51263	ADF-H domain profile.	ABP1_YEAST	7-136	1	- - - 4:7-136 - - - - -

Biological Unit 5 (1, 1)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	ADF_H	PS51263	ADF-H domain profile.	ABP1_YEAST	7-136	1	- - - - 5:7-136 - - - -

Biological Unit 6 (1, 1)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	ADF_H	PS51263	ADF-H domain profile.	ABP1_YEAST	7-136	1	- - - - - 6:7-136 - - -

Biological Unit 7 (1, 1)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	ADF_H	PS51263	ADF-H domain profile.	ABP1_YEAST	7-136	1	- - - - - - 7:7-135 - -

Biological Unit 8 (1, 1)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	ADF_H	PS51263	ADF-H domain profile.	ABP1_YEAST	7-136	1	- - - - - - - 8:7-136 -

Biological Unit 9 (1, 1)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	ADF_H	PS51263	ADF-H domain profile.	ABP1_YEAST	7-136	1	- - - - - - - - 9:7-136

Biological Unit 10 (1, 2)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	ADF_H	PS51263	ADF-H domain profile.	ABP1_YEAST	7-136	2	- - - - - - - - 9:7-136

Asymmetric Unit (1, 9)

	ENSEMBL					UniProtKB			PDB
No.	Transcript ID	Exon	Exon ID	Genome Location	Length	ID	Location	Length	Count	Location	Length
1.1	YCR088W	1	YCR088W.1	III:265065-266843	1779	ABP1_YEAST	1-592	592	9	1:3-141 2:3-141 3:3-137 4:2-138 5:3-138 6:2-138 7:2-135 8:5-136 9:2-138	139 139 135 137 136 137 134 132 137

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain 1 from PDB  Type:PROTEIN  Length:139
 aligned with ABP1_YEAST | P15891 from UniProtKB/Swiss-Prot  Length:592

    Alignment length:139
                                    12        22        32        42        52        62        72        82        92       102       112       122       132         
           ABP1_YEAST     3 LEPIDYTTHSREIDAEYLKIVRGSDPDTTWLIISPNAKKEYEPESTGSSFHDFLQLFDETKVQYGLARVSPPGSDVEKIIIIGWCPDSAPLKTRASFAANFAAVANNLFKGYHVQVTARDEDDLDENELLMKISNAAGA 141
               SCOP domains d1hqz1_ 1: Cofilin-like domain of actin-binding protein abp1p                                                                               SCOP domains
               CATH domains 1hqz100 1:3-141 Severin                                                                                                                     CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........hhhhhhhhhhhhhhh......eeeeee.....eeeeeee.hhhhhhh.......eeeeeee........eeeeeee.....hhhhhhhhhhhhhhhhhhh.....eeeee.hhhhhhhhhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----ADF_H  PDB: 1:7-136 UniProt: 7-136                                                                                                ----- PROSITE
               Transcript 1 Exon 1.1  PDB: 1:3-141 UniProt: 1-592 [INCOMPLETE]                                                                                          Transcript 1
                 1hqz 1   3 LEPIDYTTHSREIDAEYLKIVRGSDPDTTWLIISPNAKKEYEPESTGSSFHDFLQLFDETKVQYGLARVSPPGSDVEKIIIIGWCPDSAPLKTRASFAANFAAVANNLFKGYHVQVTARDEDDLDENELLMKISNAAGA 141
                                    12        22        32        42        52        62        72        82        92       102       112       122       132

Chain 2 from PDB  Type:PROTEIN  Length:139
 aligned with ABP1_YEAST | P15891 from UniProtKB/Swiss-Prot  Length:592

    Alignment length:139
                                    12        22        32        42        52        62        72        82        92       102       112       122       132         
           ABP1_YEAST     3 LEPIDYTTHSREIDAEYLKIVRGSDPDTTWLIISPNAKKEYEPESTGSSFHDFLQLFDETKVQYGLARVSPPGSDVEKIIIIGWCPDSAPLKTRASFAANFAAVANNLFKGYHVQVTARDEDDLDENELLMKISNAAGA 141
               SCOP domains d1hqz2_ 2: Cofilin-like domain of actin-binding protein abp1p                                                                               SCOP domains
               CATH domains 1hqz200 2:3-141 Severin                                                                                                                     CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........hhhhhhhhhhhhhhh......eeeeee.....eeeeeee.hhhhhh........eeeeeee........eeeeeee.....hhhhhhhhhhhhhhhhhhh.....eeeee.hhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----ADF_H  PDB: 2:7-136 UniProt: 7-136                                                                                                ----- PROSITE
               Transcript 1 Exon 1.1  PDB: 2:3-141 UniProt: 1-592 [INCOMPLETE]                                                                                          Transcript 1
                 1hqz 2   3 LEPIDYTTHSREIDAEYLKIVRGSDPDTTWLIISPNAKKEYEPESTGSSFHDFLQLFDETKVQYGLARVSPPGSDVEKIIIIGWCPDSAPLKTRASFAANFAAVANNLFKGYHVQVTARDEDDLDENELLMKISNAAGA 141
                                    12        22        32        42        52        62        72        82        92       102       112       122       132

Chain 3 from PDB  Type:PROTEIN  Length:135
 aligned with ABP1_YEAST | P15891 from UniProtKB/Swiss-Prot  Length:592

    Alignment length:135
                                    12        22        32        42        52        62        72        82        92       102       112       122       132     
           ABP1_YEAST     3 LEPIDYTTHSREIDAEYLKIVRGSDPDTTWLIISPNAKKEYEPESTGSSFHDFLQLFDETKVQYGLARVSPPGSDVEKIIIIGWCPDSAPLKTRASFAANFAAVANNLFKGYHVQVTARDEDDLDENELLMKISN 137
               SCOP domains d1hqz3_ 3: Cofilin-like domain of actin-binding protein abp1p                                                                           SCOP domains
               CATH domains 1hqz300 3:3-137 Severin                                                                                                                 CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........hhhhhhhhhhhhhhh......eeeeee.....eeeeeee.hhhhhh........eeeeeee........eeeeeee.....hhhhhhhhhhhhhhhhhhh.....eeeee.hhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----ADF_H  PDB: 3:7-136 UniProt: 7-136                                                                                                - PROSITE
               Transcript 1 Exon 1.1  PDB: 3:3-137 UniProt: 1-592 [INCOMPLETE]                                                                                      Transcript 1
                 1hqz 3   3 LEPIDYTTHSREIDAEYLKIVRGSDPDTTWLIISPNAKKEYEPESTGSSFHDFLQLFDETKVQYGLARVSPPGSDVEKIIIIGWCPDSAPLKTRASFAANFAAVANNLFKGYHVQVTARDEDDLDENELLMKISN 137
                                    12        22        32        42        52        62        72        82        92       102       112       122       132

Chain 4 from PDB  Type:PROTEIN  Length:137
 aligned with ABP1_YEAST | P15891 from UniProtKB/Swiss-Prot  Length:592

    Alignment length:137
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       
           ABP1_YEAST     2 ALEPIDYTTHSREIDAEYLKIVRGSDPDTTWLIISPNAKKEYEPESTGSSFHDFLQLFDETKVQYGLARVSPPGSDVEKIIIIGWCPDSAPLKTRASFAANFAAVANNLFKGYHVQVTARDEDDLDENELLMKISNA 138
               SCOP domains d1hqz4_ 4: Cofilin-like domain of actin-binding protein abp1p                                                                             SCOP domains
               CATH domains 1hqz400 4:2-138 Severin                                                                                                                   CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .........hhhhhhhhhhhhhh.......eeeeee.....eeeeeee.hhhhhh........eeeeeee........eeeeeee.....hhhhhhhhhhhhhhhhhhh.....eeeee.hhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -----ADF_H  PDB: 4:7-136 UniProt: 7-136                                                                                                -- PROSITE
               Transcript 1 Exon 1.1  PDB: 4:2-138 UniProt: 1-592 [INCOMPLETE]                                                                                        Transcript 1
                 1hqz 4   2 ALEPIDYTTHSREIDAEYLKIVRGSDPDTTWLIISPNAKKEYEPESTGSSFHDFLQLFDETKVQYGLARVSPPGSDVEKIIIIGWCPDSAPLKTRASFAANFAAVANNLFKGYHVQVTARDEDDLDENELLMKISNA 138
                                    11        21        31        41        51        61        71        81        91       101       111       121       131

Chain 5 from PDB  Type:PROTEIN  Length:136
 aligned with ABP1_YEAST | P15891 from UniProtKB/Swiss-Prot  Length:592

    Alignment length:136
                                    12        22        32        42        52        62        72        82        92       102       112       122       132      
           ABP1_YEAST     3 LEPIDYTTHSREIDAEYLKIVRGSDPDTTWLIISPNAKKEYEPESTGSSFHDFLQLFDETKVQYGLARVSPPGSDVEKIIIIGWCPDSAPLKTRASFAANFAAVANNLFKGYHVQVTARDEDDLDENELLMKISNA 138
               SCOP domains d1hqz5_ 5: Cofilin-like domain of actin-binding protein abp1p                                                                            SCOP domains
               CATH domains 1hqz500 5:3-138 Severin                                                                                                                  CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........hhhhhhhhhhhhhhh......eeeeee.....eeeeeee.hhhhhh........eeeeeee........eeeeeee.....hhhhhhhhhhhhhhhhhhh.....eeeee.hhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----ADF_H  PDB: 5:7-136 UniProt: 7-136                                                                                                -- PROSITE
               Transcript 1 Exon 1.1  PDB: 5:3-138 UniProt: 1-592 [INCOMPLETE]                                                                                       Transcript 1
                 1hqz 5   3 LEPIDYTTHSREIDAEYLKIVRGSDPDTTWLIISPNAKKEYEPESTGSSFHDFLQLFDETKVQYGLARVSPPGSDVEKIIIIGWCPDSAPLKTRASFAANFAAVANNLFKGYHVQVTARDEDDLDENELLMKISNA 138
                                    12        22        32        42        52        62        72        82        92       102       112       122       132

Chain 6 from PDB  Type:PROTEIN  Length:137
 aligned with ABP1_YEAST | P15891 from UniProtKB/Swiss-Prot  Length:592

    Alignment length:137
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       
           ABP1_YEAST     2 ALEPIDYTTHSREIDAEYLKIVRGSDPDTTWLIISPNAKKEYEPESTGSSFHDFLQLFDETKVQYGLARVSPPGSDVEKIIIIGWCPDSAPLKTRASFAANFAAVANNLFKGYHVQVTARDEDDLDENELLMKISNA 138
               SCOP domains d1hqz6_ 6: Cofilin-like domain of actin-binding protein abp1p                                                                             SCOP domains
               CATH domains 1hqz600 6:2-138 Severin                                                                                                                   CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .........hhhhhhhhhhhhhhh......eeeeee.....eeeeeee.hhhhhh........eeeeeee........eeeeeee.....hhhhhhhhhhhhhhhhhhh.....eeeee.hhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -----ADF_H  PDB: 6:7-136 UniProt: 7-136                                                                                                -- PROSITE
               Transcript 1 Exon 1.1  PDB: 6:2-138 UniProt: 1-592 [INCOMPLETE]                                                                                        Transcript 1
                 1hqz 6   2 ALEPIDYTTHSREIDAEYLKIVRGSDPDTTWLIISPNAKKEYEPESTGSSFHDFLQLFDETKVQYGLARVSPPGSDVEKIIIIGWCPDSAPLKTRASFAANFAAVANNLFKGYHVQVTARDEDDLDENELLMKISNA 138
                                    11        21        31        41        51        61        71        81        91       101       111       121       131

Chain 7 from PDB  Type:PROTEIN  Length:134
 aligned with ABP1_YEAST | P15891 from UniProtKB/Swiss-Prot  Length:592

    Alignment length:134
                                    11        21        31        41        51        61        71        81        91       101       111       121       131    
           ABP1_YEAST     2 ALEPIDYTTHSREIDAEYLKIVRGSDPDTTWLIISPNAKKEYEPESTGSSFHDFLQLFDETKVQYGLARVSPPGSDVEKIIIIGWCPDSAPLKTRASFAANFAAVANNLFKGYHVQVTARDEDDLDENELLMKI 135
               SCOP domains d1hqz7_ 7: Cofilin-like domain of actin-binding protein abp1p                                                                          SCOP domains
               CATH domains 1hqz700 7:2-135 Severin                                                                                                                CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .........hhhhhhhhhhhhhhh......eeeeee.....eeeeeee.hhhhhh........eeeeeee........eeeeeee.....hhhhhhhhhhhhhhhhhhh.....eeeee.hhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -----ADF_H  PDB: 7:7-135 UniProt: 7-136                                                                                                PROSITE
               Transcript 1 Exon 1.1  PDB: 7:2-135 UniProt: 1-592 [INCOMPLETE]                                                                                     Transcript 1
                 1hqz 7   2 ALEPIDYTTHSREIDAEYLKIVRGSDPDTTWLIISPNAKKEYEPESTGSSFHDFLQLFDETKVQYGLARVSPPGSDVEKIIIIGWCPDSAPLKTRASFAANFAAVANNLFKGYHVQVTARDEDDLDENELLMKI 135
                                    11        21        31        41        51        61        71        81        91       101       111       121       131

Chain 8 from PDB  Type:PROTEIN  Length:132
 aligned with ABP1_YEAST | P15891 from UniProtKB/Swiss-Prot  Length:592

    Alignment length:132
                                    14        24        34        44        54        64        74        84        94       104       114       124       134  
           ABP1_YEAST     5 PIDYTTHSREIDAEYLKIVRGSDPDTTWLIISPNAKKEYEPESTGSSFHDFLQLFDETKVQYGLARVSPPGSDVEKIIIIGWCPDSAPLKTRASFAANFAAVANNLFKGYHVQVTARDEDDLDENELLMKIS 136
               SCOP domains d1hqz8_ 8: Cofilin-like domain of actin-binding protein abp1p                                                                        SCOP domains
               CATH domains 1hqz800 8:5-136 Severin                                                                                                              CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ......hhhhhhhhhhhhhhh......eeeeee.....eeeeeee.hhhhhh........eeeeeee........eeeeeee.....hhhhhhhhhhhhhhhhhhh.....eeeee.hhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE --ADF_H  PDB: 8:7-136 UniProt: 7-136                                                                                                 PROSITE
               Transcript 1 Exon 1.1  PDB: 8:5-136 UniProt: 1-592 [INCOMPLETE]                                                                                   Transcript 1
                 1hqz 8   5 PIDYTTHSREIDAEYLKIVRGSDPDTTWLIISPNAKKEYEPESTGSSFHDFLQLFDETKVQYGLARVSPPGSDVEKIIIIGWCPDSAPLKTRASFAANFAAVANNLFKGYHVQVTARDEDDLDENELLMKIS 136
                                    14        24        34        44        54        64        74        84        94       104       114       124       134

Chain 9 from PDB  Type:PROTEIN  Length:137
 aligned with ABP1_YEAST | P15891 from UniProtKB/Swiss-Prot  Length:592

    Alignment length:137
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       
           ABP1_YEAST     2 ALEPIDYTTHSREIDAEYLKIVRGSDPDTTWLIISPNAKKEYEPESTGSSFHDFLQLFDETKVQYGLARVSPPGSDVEKIIIIGWCPDSAPLKTRASFAANFAAVANNLFKGYHVQVTARDEDDLDENELLMKISNA 138
               SCOP domains d1hqz9_ 9: Cofilin-like domain of actin-binding protein abp1p                                                                             SCOP domains
               CATH domains 1hqz900 9:2-138 Severin                                                                                                                   CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .........hhhhhhhhhhhhhhh......eeeeee.....eeeeeee.hhhhhh........eeeeeee........eeeeeee.....hhhhhhhhhhhhhhhhhhh.....eeeee.hhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -----ADF_H  PDB: 9:7-136 UniProt: 7-136                                                                                                -- PROSITE
               Transcript 1 Exon 1.1  PDB: 9:2-138 UniProt: 1-592 [INCOMPLETE]                                                                                        Transcript 1
                 1hqz 9   2 ALEPIDYTTHSREIDAEYLKIVRGSDPDTTWLIISPNAKKEYEPESTGSSFHDFLQLFDETKVQYGLARVSPPGSDVEKIIIIGWCPDSAPLKTRASFAANFAAVANNLFKGYHVQVTARDEDDLDENELLMKISNA 138
                                    11        21        31        41        51        61        71        81        91       101       111       121       131

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric Unit

Classes(

)

Folds(

)

Superfamilies( (-)

)

Families(

)

Protein Domains( (-)

)

Organisms( (-)

)

Class: Alpha and beta proteins (a+b) (23004)

Fold: Gelsolin-like (96)

Superfamily: Actin depolymerizing proteins (88)

Family: Cofilin-like (32)

Protein domain: Cofilin-like domain of actin-binding protein abp1p (1)

Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] (1)

1a	d1hqz1_	1:
1b	d1hqz2_	2:
1c	d1hqz3_	3:
1d	d1hqz4_	4:
1e	d1hqz5_	5:
1f	d1hqz6_	6:
1g	d1hqz7_	7:
1h	d1hqz8_	8:
1i	d1hqz9_	9:

Asymmetric Unit

Classes(

)

Architectures( (-)

)

Topologies( (-)

)

Homologous Superfamilies( (-)

)

Organisms( (-)

)

Class: Alpha Beta (26913)

Architecture: 3-Layer(aba) Sandwich (12045)

Topology: Severin (74)

Homologous Superfamily: Severin (74)

Baker's yeast (Saccharomyces cerevisiae) (9)

1a	1hqz800	8:5-136
1b	1hqz400	4:2-138
1c	1hqz600	6:2-138
1d	1hqz900	9:2-138
1e	1hqz100	1:3-141
1f	1hqz200	2:3-141
1g	1hqz700	7:2-135
1h	1hqz300	3:3-137
1i	1hqz500	5:3-138

(no "Pfam Domain" information available for 1HQZ)

Asymmetric Unit(hide GO term definitions)

Chain 1,2,3,4,5,6,7,8,9 (ABP1_YEAST | P15891)

molecular function
	GO:0003779	actin binding	Interacting selectively and non-covalently with monomeric or multimeric forms of actin, including actin filaments.
	GO:0051015	actin filament binding	Interacting selectively and non-covalently with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits.
	GO:0005515	protein binding	Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
biological process
	GO:0000147	actin cortical patch assembly	Assembly of an actin cortical patch, a discrete actin-containing structure found at the plasma membrane of fungal cells.
	GO:0051016	barbed-end actin filament capping	The binding of a protein or protein complex to the barbed (or plus) end of an actin filament, thus preventing the addition, exchange or removal of further actin subunits.
	GO:0008104	protein localization	Any process in which a protein is transported to, or maintained in, a specific location.
cellular component
	GO:0030479	actin cortical patch	An endocytic patch that consists of an actin-containing structure found at the plasma membrane in cells; formed of networks of branched actin filaments that lie just beneath the plasma membrane and assemble, move, and disassemble rapidly. An example of this is the actin cortical patch found in Saccharomyces cerevisiae.
	GO:0005938	cell cortex	The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins.
	GO:0005737	cytoplasm	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
	GO:0005856	cytoskeleton	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles.
	GO:0005622	intracellular	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.

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(no "Related Entries Specified in the PDB File" available for 1HQZ)

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