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(-) Description

Title :  STRUCTURE OF A PILIN MONOMER FROM PSEUDOMONAS AERUGINOSA: IMPLICATIONS FOR THE ASSEMBLY OF PILI.
 
Authors :  D. W. Keizer, C. M. Slupsky, A. P. Campbell, R. T. Irvin, B. D. Sykes
Date :  13 Dec 00  (Deposition) - 02 May 01  (Release) - 24 Feb 09  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (10x)
Keywords :  Fimbria, Methylation, Contractile Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  D. W. Keizer, C. M. Slupsky, M. Kalisiak, A. P. Campbell, M. P. Crump, P. A. Sastry, B. Hazes, R. T. Irvin, B. D. Sykes
Structure Of A Pilin Monomer From Pseudomonas Aeruginosa: Implications For The Assembly Of Pili.
J. Biol. Chem. V. 276 24186 2001
PubMed-ID: 11294863  |  Reference-DOI: 10.1074/JBC.M100659200
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - FIMBRIAL PROTEIN
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PRLD
    Expression System Strain: DH5ALPHA
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Fragment: PILIN (RESIDUES 29-150)
    Organism Scientific: PSEUDOMONAS AERUGINOSA
    Organism Taxid: 287
    Strain: K122-4
    Synonym: PILIN

 Structural Features

(-) Chains, Units

  
NMR Structure (10x): 

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 1HPW)

(-) Sites  (0, 0)

(no "Site" information available for 1HPW)

(-) SS Bonds  (2, 2)

NMR Structure
No.Residues
1A:57 -A:93
2A:129 -A:142

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 1HPW)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1HPW)

(-) PROSITE Motifs  (1, 1)

NMR Structure (1, 1)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1PROKAR_NTER_METHYLPS00409 Prokaryotic N-terminal methylation site.FMP1_PSEAI6-26  1A:25-25

(-) Exons   (0, 0)

(no "Exon" information available for 1HPW)

(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:129
 aligned with FMP1_PSEAI | P17838 from UniProtKB/Swiss-Prot  Length:157

    Alignment length:154
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153    
           FMP1_PSEAI     4 AQKGFTLIELMIVVAIIGILAAIAIPAYQDYTARAQLSERMTLASGLKTKVSDIFSQDGSCPANTAATAGIEKDTDINGKYVAKVTTGGTAAASGGCTIVATMKASDVATPLRGKTLTLTLGNADKGSYTWACTSNADNKYLPKTCQTATTTTP 157
               SCOP domains d1hp                        wa_  A: Pilin P1                                                                                                               SCOP domains
               CATH domains 1hpw                        A00  A:22-150 Glycoprotein, Type 4 Pilin                                                                                       CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....------------------------...-..hhhhhhhhhhhhhhhhhhhhhhhhh.....................................eeeeeee...........eeeeeee.........eeeeee..........ee...... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --PROKAR_NTER_METHYL   ----------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1hpw A  22 ALEG------------------------TEF-ARAQLSEAMTLASGLKTKVSDIFSQDGSCPANTAATAGIEKDTDINGKYVAKVTTGGTAAASGGCTIVATMKASDVATPLRGKTLTLTLGNADKGSYTWACTSNADNKYLPKTCQTATTTTP 150
                               |     -         -        27| |     36        46        56        66        76        86        96       106       116       126       136       146    
                              25                       26 | |                                                                                                                         
                                                         28 |                                                                                                                         
                                                           29
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 1)

NMR Structure
(-)
Class: Alpha and beta proteins (a+b) (23004)

(-) CATH Domains  (1, 1)

NMR Structure
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 1HPW)

(-) Gene Ontology  (2, 2)

NMR Structure(hide GO term definitions)
Chain A   (FMP1_PSEAI | P17838)
biological process
    GO:0007155    cell adhesion    The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules.
cellular component
    GO:0009289    pilus    A proteinaceous hair-like appendage on the surface of bacteria ranging from 2-8 nm in diameter.

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  1hpw
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  FMP1_PSEAI | P17838
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        FMP1_PSEAI | P17838: 1qve 1rg0

(-) Related Entries Specified in the PDB File

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