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(-) Description

Title :  SOLUTION STRUCTURE OF HUMAN P8-MTCP1, A CYSTEINE-RICH PROTEIN ENCODED BY THE MTCP1 ONCOGENE,REVEALS A NEW ALPHA-HELICAL ASSEMBLY MOTIF, NMR, MINIMIZED AVERAGE STRUCTURE
 
Authors :  P. Barthe, L. Chiche, M. P. Strub, C. Roumestand
Date :  26 Aug 97  (Deposition) - 04 Mar 98  (Release) - 24 Feb 09  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A
Keywords :  Hu-P8, Leukemia, Cysteine Motif (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  P. Barthe, Y. S. Yang, L. Chiche, F. Hoh, M. P. Strub, L. Guignard, J. Soulier, M. H. Stern, H. Van Tilbeurgh, J. M. Lhoste, C. Roumestand
Solution Structure Of Human P8Mtcp1, A Cysteine-Rich Protein Encoded By The Mtcp1 Oncogene, Reveals A New Alpha-Helical Assembly Motif.
J. Mol. Biol. V. 274 801 1997
PubMed-ID: 9405159  |  Reference-DOI: 10.1006/JMBI.1997.1438
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - HU-P8
    Cell: T-LYMPHOCYTE
    Cellular Location: MITOCHONDRIA
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI BL21
    Expression System Plasmid: PGEX2T
    Expression System Strain: BL21
    Expression System Taxid: 511693
    Gene: MTCP1
    Mutation: YES
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606

 Structural Features

(-) Chains, Units

  
NMR Structure : 

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 1HP8)

(-) Sites  (0, 0)

(no "Site" information available for 1HP8)

(-) SS Bonds  (3, 3)

NMR Structure
No.Residues
1A:7 -A:38
2A:17 -A:28
3A:39 -A:50

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 1HP8)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1HP8)

(-) PROSITE Motifs  (1, 1)

NMR Structure (1, 1)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1CHCHPS51808 Coiled coil-helix-coiled coil-helix (CHCH) domain profile.CMC4_HUMAN4-46  1A:4-46

(-) Exons   (2, 2)

NMR Structure (2, 2)
 ENSEMBLUniProtKBPDB
No.Transcript IDExonExon IDGenome LocationLengthIDLocationLengthCountLocationLength
1.1ENST000003694841ENSE00001450140X:154299637-154298969669CMC4_HUMAN-00--
1.4ENST000003694844ENSE00002169877X:154292308-15429224168CMC4_HUMAN1-20201A:1-2020
1.5bENST000003694845bENSE00001450138X:154290266-154289897370CMC4_HUMAN20-68491A:20-6849

(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:68
 aligned with CMC4_HUMAN | P56277 from UniProtKB/Swiss-Prot  Length:68

    Alignment length:68
                                    10        20        30        40        50        60        
            CMC4_HUMAN    1 MPQKDPCQKQACEIQKCLQANSYMESKCQAVIQELRKCCAQYPKGRSVVCSGFEKEEEENLTRKSASK 68
               SCOP domains d1hp8a_ A: p8-MTCP1                                                  SCOP domains
               CATH domains 1hp8A00 A:1-68 Cysteine Motif                                        CATH domains
               Pfam domains -------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......hhhhhhhhhhhhh........hhhhhhhhhhhh...hhh.hhhhhhhhhhhhhhhh..... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---CHCH  PDB: A:4-46 UniProt: 4-46            ---------------------- PROSITE
           Transcript 1 (1) Exon 1.4  PDB: A:1-2------------------------------------------------ Transcript 1 (1)
           Transcript 1 (2) -------------------Exon 1.5b  PDB: A:20-68 UniProt: 20-68            Transcript 1 (2)
                  1hp8 A  1 MPQKDPCQKQACEIQKCLQANSYMESKCQAVIQELRKCCAQYPKGRSVVCSGFEKEEEENLTRKSASK 68
                                    10        20        30        40        50        60
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 1)

NMR Structure
(-)
Class: All alpha proteins (14657)

(-) CATH Domains  (1, 1)

NMR Structure
(-)
Class: Mainly Alpha (13335)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 1HP8)

(-) Gene Ontology  (2, 2)

NMR Structure(hide GO term definitions)
Chain A   (CMC4_HUMAN | P56277)
biological process
    GO:0008283    cell proliferation    The multiplication or reproduction of cells, resulting in the expansion of a cell population.
cellular component
    GO:0005739    mitochondrion    A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.

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  1hp8
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        CMC4_HUMAN | P56277: 1ei0 2hp8

(-) Related Entries Specified in the PDB File

2hp8