1HJ0 - JenaLib

Title :   THYMOSIN BETA9

Authors :   R. Stoll, W. Voelter, T. A. Holak

Date :   05 Jan 01 (Deposition) - 04 Jan 02 (Release) - 24 Feb 09 (Revision)

Method :   SOLUTION NMR

Resolution :   NOT APPLICABLE

Chains :   NMR Structure  : A

Keywords :   Actin Binding Peptide, T-Cell Differentiation, Immunopotentiation, Thymus, Actin (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   R. Stoll, W. Voelter, T. A. Holak
Conformation Of Thymosin Beta9 In Water/Fluoroalcohol Solution Determined By Nmr Spectroscopy
Biopolymers V. 41 623 1997
PubMed-ID: 9108730 | Reference-DOI: 10.1002/(SICI)1097-0282(199705)41:6<623::AID- BIP3>3.0.CO;2-S

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (0, 0)

Sites (0, 0)

SS Bonds (0, 0)

Cis Peptide Bonds (0, 0)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (1, 1)

Exons (2, 2)

NMR Structure (2, 2)

	ENSEMBL					UniProtKB			PDB
No.	Transcript ID	Exon	Exon ID	Genome Location	Length	ID	Location	Length	Count	Location	Length
1.1	ENSBTAT00000007429	1	ENSBTAE00000269745	chr11:51855961-51855899	63	TYB10_BOVIN	-	0	0	-	-
1.2	ENSBTAT00000007429	2	ENSBTAE00000059700	chr11:51855621-51855507	115	TYB10_BOVIN	1-34	34	1	A:1-33	33
1.3	ENSBTAT00000007429	3	ENSBTAE00000059708	chr11:51855223-51854940	284	TYB10_BOVIN	34-42	9	1	A:33-41	9

Sequences/Alignments

NMR Structure

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
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	UniProt sequence: complete aligned part

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Chain A from PDB  Type:PROTEIN  Length:41
 aligned with TYB10_BOVIN | P21752 from UniProtKB/Swiss-Prot  Length:42

    Alignment length:41
                                    11        21        31        41 
           TYB10_BOVIN    2 ADKPDLGEINSFDKAKLKKTETQEKNTLPTKETIEQEKQAK 42
               SCOP domains d1hj0a_ A: Thymosin beta9                 SCOP domains
               CATH domains 1hj0A00 A:1-41 Single helix bin           CATH domains
               Pfam domains ----------------------------------------- Pfam domains
         Sec.struct. author ...hhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------------------- SAPs(SNPs)
                    PROSITE ----------------THYMOSIN_B4 ------------- PROSITE
           Transcript 1 (1) Exon 1.2  PDB: A:1-33            -------- Transcript 1 (1)
           Transcript 1 (2) --------------------------------Exon 1.3  Transcript 1 (2)
                  1hj0 A  1 ADKPDLGEINSFDKAKLKKTETQEKNTLPTKETIEQEKQAK 41
                                    10        20        30        40

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Classification and Annotation

SCOP Domains (1, 1)

CATH Domains (1, 1)

Pfam Domains (0, 0)

Gene Ontology (5, 5)

NMR Structure(hide GO term definitions)

Chain A (TYB10_BOVIN | P21752)

molecular function
	GO:0003779	actin binding	Interacting selectively and non-covalently with monomeric or multimeric forms of actin, including actin filaments.
	GO:0003785	actin monomer binding	Interacting selectively and non-covalently with monomeric actin, also known as G-actin.
biological process
	GO:0007015	actin filament organization	A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments. Includes processes that control the spatial distribution of actin filaments, such as organizing filaments into meshworks, bundles, or other structures, as by cross-linking.
cellular component
	GO:0005737	cytoplasm	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
	GO:0005856	cytoskeleton	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles.

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