1H5N - JenaLib

Asymmetric Unit (Jmol Viewer)

Asym. Unit - sites (Jmol Viewer)

Biological Unit 1 (Jmol Viewer)

Biol. Unit 1 - sites (Jmol Viewer)

Biological Unit 2 (Jmol Viewer)

Title :   DMSO REDUCTASE MODIFIED BY THE PRESENCE OF DMS AND AIR

Authors :   S. Bailey, B. Adams, A. T. Smith, R. L. Richards, D. J. Lowe, R. C. Bray

Date :   22 May 01 (Deposition) - 17 May 02 (Release) - 14 Nov 12 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.00

Chains :   Asym. Unit : A,C
Biol. Unit 1: A  (1x)
Biol. Unit 2: C  (1x)

Keywords :   Oxidoreductase, Reductase, Dmso, Dms, Molybdopterin (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   R. C. Bray, B. Adams, A. T. Smith, R. L. Richards, D. J. Lowe, S. Bailey
Reactions Of Dimethyl Sulphoxide Reductase In The Presence Of Dimethylsulphide And The Structure Of The Dimethylsulphide-Modified Enzyme
Biochemistry V. 40 9810 2001
PubMed-ID: 11502174 | Reference-DOI: 10.1021/BI010559R

Molecule 1 - DMSO REDUCTASE
	Cellular Location	:	PERIPLASM
	Chains	:	A, C
	Organism Scientific	:	RHODOBACTER CAPSULATUS
	Organism Taxid	:	1061
	Strain	:	H123

		1	2
Asymmetric Unit	:	A	C
Biological Unit 1 (1x)	:	A
Biological Unit 2 (1x)	:		C

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (3, 8)

No.	Name	Count	Type	Full Name
1	6MO	2	Ligand/Ion	MOLYBDENUM(VI) ION
2	PGD	4	Ligand/Ion	2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE
3	SO4	2	Ligand/Ion	SULFATE ION

Biological Unit 1 (3, 4)

No.	Name	Count	Type	Full Name
1	6MO	1	Ligand/Ion	MOLYBDENUM(VI) ION
2	PGD	2	Ligand/Ion	2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE
3	SO4	1	Ligand/Ion	SULFATE ION

Biological Unit 2 (3, 4)

No.	Name	Count	Type	Full Name
1	6MO	1	Ligand/Ion	MOLYBDENUM(VI) ION
2	PGD	2	Ligand/Ion	2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE
3	SO4	1	Ligand/Ion	SULFATE ION

Asymmetric Unit (8, 8)

No.	Name	Evidence	Residues	Description
1	AC1	SOFTWARE	LYS A:117 , ARG A:121 , ASN A:124 , TRP A:196 , HOH A:2133 , HOH A:2652	BINDING SITE FOR RESIDUE SO4 A1785
2	AC2	SOFTWARE	LYS C:117 , ARG C:121 , ASN C:124 , TRP C:196 , HOH C:2117 , HOH C:2581 , HOH C:2582	BINDING SITE FOR RESIDUE SO4 C1785
3	AC3	SOFTWARE	TYR A:114 , GLY A:115 , TRP A:116 , LYS A:117 , SER A:118 , TYR A:146 , SER A:147 , ARG A:326 , GLY A:432 , GLY A:433 , ASN A:434 , HIS A:438 , GLN A:440 , HIS A:458 , ASP A:459 , PHE A:460 , THR A:463 , ALA A:475 , ARG A:481 , ASP A:511 , ALA A:641 , HIS A:643 , LEU A:648 , HIS A:649 , SER A:650 , GLN A:651 , GLU A:715 , ASN A:737 , GLY A:754 , GLN A:755 , PGD A:1783 , 6MO A:1784 , HOH A:2131 , HOH A:2592 , HOH A:2647 , HOH A:2648	BINDING SITE FOR RESIDUE PGD A1782
4	AC4	SOFTWARE	TRP A:116 , SER A:147 , ALA A:185 , LYS A:190 , THR A:191 , GLN A:193 , ILE A:194 , ILE A:220 , ASP A:221 , PRO A:222 , THR A:225 , PRO A:240 , GLN A:241 , ASP A:243 , GLY A:321 , TRP A:322 , SER A:323 , ARG A:326 , MET A:327 , HIS A:359 , SER A:642 , HIS A:643 , PRO A:644 , ARG A:647 , LEU A:648 , HIS A:649 , GLN A:755 , PGD A:1782 , 6MO A:1784 , HOH A:2186 , HOH A:2533 , HOH A:2623 , HOH A:2650	BINDING SITE FOR RESIDUE PGD A1783
5	AC5	SOFTWARE	SER A:147 , PGD A:1782 , PGD A:1783	BINDING SITE FOR RESIDUE 6MO A1784
6	AC6	SOFTWARE	TYR C:114 , GLY C:115 , TRP C:116 , LYS C:117 , SER C:118 , TYR C:146 , SER C:147 , ARG C:326 , GLY C:432 , GLY C:433 , ASN C:434 , HIS C:438 , GLN C:440 , HIS C:458 , ASP C:459 , PHE C:460 , THR C:463 , ALA C:475 , ARG C:481 , ASP C:511 , ALA C:641 , HIS C:643 , HIS C:649 , SER C:650 , GLN C:651 , GLU C:715 , ASN C:737 , GLY C:754 , GLN C:755 , PGD C:1783 , 6MO C:1784 , HOH C:2524 , HOH C:2577 , HOH C:2578 , HOH C:2579	BINDING SITE FOR RESIDUE PGD C1782
7	AC7	SOFTWARE	TRP C:116 , SER C:147 , ALA C:185 , LYS C:190 , THR C:191 , GLN C:193 , ILE C:194 , ILE C:220 , ASP C:221 , PRO C:222 , THR C:225 , PRO C:240 , GLN C:241 , ASP C:243 , GLY C:321 , TRP C:322 , SER C:323 , ARG C:326 , MET C:327 , HIS C:359 , SER C:642 , HIS C:643 , PRO C:644 , ARG C:647 , LEU C:648 , HIS C:649 , GLN C:755 , PGD C:1782 , 6MO C:1784 , HOH C:2161 , HOH C:2469 , HOH C:2471 , HOH C:2580	BINDING SITE FOR RESIDUE PGD C1783
8	AC8	SOFTWARE	SER C:147 , PGD C:1782 , PGD C:1783	BINDING SITE FOR RESIDUE 6MO C1784

(no "SS Bond" information available for 1H5N)

(no "Cis Peptide Bond" information available for 1H5N)

(no "SAP(SNP)/Variant" information available for 1H5N)

Asymmetric Unit (2, 4)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	MOLYBDOPTERIN_PROK_2	PS00490	Prokaryotic molybdopterin oxidoreductases signature 2.	DSTOR_RHOCA	505-522	2	A:463-480 C:463-480
2	MOLYBDOPTERIN_PROK_3	PS00932	Prokaryotic molybdopterin oxidoreductases signature 3.	DSTOR_RHOCA	718-745	2	A:676-703 C:676-703

Biological Unit 1 (2, 2)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	MOLYBDOPTERIN_PROK_2	PS00490	Prokaryotic molybdopterin oxidoreductases signature 2.	DSTOR_RHOCA	505-522	1	A:463-480 -
2	MOLYBDOPTERIN_PROK_3	PS00932	Prokaryotic molybdopterin oxidoreductases signature 3.	DSTOR_RHOCA	718-745	1	A:676-703 -

Biological Unit 2 (2, 2)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	MOLYBDOPTERIN_PROK_2	PS00490	Prokaryotic molybdopterin oxidoreductases signature 2.	DSTOR_RHOCA	505-522	1	- C:463-480
2	MOLYBDOPTERIN_PROK_3	PS00932	Prokaryotic molybdopterin oxidoreductases signature 3.	DSTOR_RHOCA	718-745	1	- C:676-703

(no "Exon" information available for 1H5N)

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:765
 aligned with DSTOR_RHOCA | Q52675 from UniProtKB/Swiss-Prot  Length:823

    Alignment length:778
                                    55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415       425       435       445       455       465       475       485       495       505       515       525       535       545       555       565       575       585       595       605       615       625       635       645       655       665       675       685       695       705       715       725       735       745       755       765       775       785       795       805       815        
          DSTOR_RHOCA    46 ANGTVMSGSHWGVFTATVENGRATAFTPWEKDPHPTPMLEGVLDSIYSPTRIKYPMVRREFLEKGVNADRSTRGNGDFVRVSWDQALDLVAAEVKRVEETYGPQGVFGGSYGWKSPGRLHNCTTLLRRMLTLAGGYVNGAGDYSTGAAQVIMPHVVGTLEVYEQQTAWPVLAENTEVMVFWAADPIKTSQIGWVIPEHGAYPGLEALKAKGTKVIVIDPVRTKTVEFFGADHVTPKPQTDVAIMLGMAHTLVAEDLYDKDFIANYTSGFDKFLPYLMGETDSTPKTAEWASDISGVPAETIKELARLFISKRTMLAAGWSMQRMHHGEQAHWMLVTLASMLGQIGLPGGGFGLSYHYSGGGTPSTSGPALSGITDGGAATKGPEWLAASGASVIPVARVVDMLENPGAEFDFNGTRSKFPDVKMAYWVGGNPFVHHQDRNRMVKAWEKLETFIVHDFQWTPTARHADIVLPATTSYERNDIETIGDYSNTGILAMKKIVEPLYEARSDYDIFAAVAERLGKGKEFTEGKDEMGWIKSFYDDAAKQGKAGGVEMPAFDAFWAEGIVEFPVTDGADFVRYASFREDPLLNPLGTPTGLIEIYSKNIEKMGYDDCPAHPTWMEPLERLDGPGAKYPLHIAASHPFNRLHSQLNGTVLREGYAVQGHEPCLMHPDDAAARGIADGDVVRVHNDRGQILTGVKVTDAVMKGVIQIYEGGWYDPSDVTEPGTLDKYGDVNVLSADIGTSKLAQGNCGQTVLAEVEKYTGPAVTLTGFVAPKAAE 823
               SCOP domains d1h5na2 A:4-625 Dimethylsulfoxide reductase (DMSO reductase)                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  d1h5na1 A:626-781 Dimethylsulfoxide reductase (DMSO reductase)                                                                                               SCOP domains
               CATH domains -1h5nA03                     ---------------------1h5nA01 A:54-145,A:378-481,A:507-529  [code=3.40.50.740, no name defined]                   -1h5nA02 A:147-366,A:579-604 Dimethylsulfoxide Reductase, domain 2                                                                                                                                                           -----------1h5             nA01 A:54-145,A:378-481,A:507-529  [code=3.40.50.740, no name defined]                  1h5nA03           -------1h5nA01                1h5nA03 A:5-32,A:482-499,A:530-570       --------1h5nA02                   -------1h5nA04 A:612-774  [code=2.40.40.20, no name defined]                                                                                                              ------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeee..eeeeeeee..eeeeeee.........hhhhhhhhhhh.......eeehhhhhhhhhhhhhhh....eee.hhhhhhhhhhhhhhhhhhhhh...ee.............hhhhhhhhhhhhh....eee......hhhhhhhhhh..........hhhhhhhhh.eeeee..hhhhhh.........hhhhhhhhhhhh..eeeee....hhhhhhhh.eee.....hhhhhhhhhhhhhhhh...hhhhhhhheehhhhhhhhhh........hhhhhhhhhh.hhhhhhhhhhhhhhh.eeeee.hhhhh....hhhhhhhhhhhhhhh.......eee.........................-------------..eee..hhhhhhhh...eeee..eeee.....eeeee..hhhhhh.hhhhhhhhhhhh.eeeeee...hhhhhh..eeee..hhhhh.eeeee......eeeee...........hhhhhhhhhhhhh.hhhhhhh..hhhhhhhhhhhhhhhhhhhh.....hhhhhhhhheee....hhhhh..hhhhhhh............ee..hhhhhhhh.........................eeee..............hhhhhhh......eeeehhhhhhh.......eeeee....eeeeeeee.......eee......................hhhhh..................eeeeee.............hhhhh Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MOLYBDOPTERIN_PROK---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MOLYBDOPTERIN_PROK_3        ------------------------------------------------------------------------------ PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1h5n A   4 ANGTVMSGSHWGVFTATVENGRATAFTPWEKDPHPSPMLAGVLDSIYSPTRIKYPMVRREFLEKGVNADRSTRGNGDFVRVSWDQALDLVAAEVKRVEETYGPEGVFGGSYGWKSPGRLHNCTTLLRRMLTLAGGYVNGAGDYSTGAAQVIMPHVVGTLEVYEQQTAWPVLAENTEVMVFWAADPIKTSQIGWVIPEHGAYPGLEALKAKGTKVIVIDPVRTKTVEFFGAEHITPKPQTDVAIMLGMAHTLVAEDLYDKDFIANYTSGFDKFLPYLDGETDSTPKTAEWAEGISGVPAETIKELARLFESKRTMLAAGWSMQRMHHGEQAHWMLVTLASMLGQIGLPGGGFGLSYHYSGGGTPSTSGPALAGITDGG-------------ASVIPVARVVDMLENPGAEFDFNGTRSKFPDVKMAYWVGGNPFVHHQDRNRMVKAWEKLETFVVHDFQWTPTARHADIVLPATTSYERNDIETIGDYSNTGILAMKKIVEPLYEARSDYDIFAAVAERLGKGAEFTEGKDEMGWIKSFYDDAAKQGKAAGVQMPAFDAFWAEGIVEFPVTDGADFVRYASFREDPLLNPLGTPTGLIEIYSKNIEKMGYDDCPAHPTWMEPLERLDGPGAKYPLHIAASHPFNRLHSQLNGTVLREGYAVQGHEPCLMHPDDAAARGIADGDVVRVHNDRGQILTGVKVTDAVMKGVIQIYEGGWYDPSDVTEPGTLDKYGDVNVLSADIGTSKLAQGNCGQTVLAEVEKYTGPAVTLTGFVAPKAAE 781
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373      |  -         -|      403       413       423       433       443       453       463       473       483       493       503       513       523       533       543       553       563       573       583       593       603       613       623       633       643       653       663       673       683       693       703       713       723       733       743       753       763       773        
                                                                                                                                                                                                                                                                                                                                                                                                                  380           394

Chain C from PDB  Type:PROTEIN  Length:766
 aligned with DSTOR_RHOCA | Q52675 from UniProtKB/Swiss-Prot  Length:823

    Alignment length:779
                                    54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364       374       384       394       404       414       424       434       444       454       464       474       484       494       504       514       524       534       544       554       564       574       584       594       604       614       624       634       644       654       664       674       684       694       704       714       724       734       744       754       764       774       784       794       804       814         
          DSTOR_RHOCA    45 LANGTVMSGSHWGVFTATVENGRATAFTPWEKDPHPTPMLEGVLDSIYSPTRIKYPMVRREFLEKGVNADRSTRGNGDFVRVSWDQALDLVAAEVKRVEETYGPQGVFGGSYGWKSPGRLHNCTTLLRRMLTLAGGYVNGAGDYSTGAAQVIMPHVVGTLEVYEQQTAWPVLAENTEVMVFWAADPIKTSQIGWVIPEHGAYPGLEALKAKGTKVIVIDPVRTKTVEFFGADHVTPKPQTDVAIMLGMAHTLVAEDLYDKDFIANYTSGFDKFLPYLMGETDSTPKTAEWASDISGVPAETIKELARLFISKRTMLAAGWSMQRMHHGEQAHWMLVTLASMLGQIGLPGGGFGLSYHYSGGGTPSTSGPALSGITDGGAATKGPEWLAASGASVIPVARVVDMLENPGAEFDFNGTRSKFPDVKMAYWVGGNPFVHHQDRNRMVKAWEKLETFIVHDFQWTPTARHADIVLPATTSYERNDIETIGDYSNTGILAMKKIVEPLYEARSDYDIFAAVAERLGKGKEFTEGKDEMGWIKSFYDDAAKQGKAGGVEMPAFDAFWAEGIVEFPVTDGADFVRYASFREDPLLNPLGTPTGLIEIYSKNIEKMGYDDCPAHPTWMEPLERLDGPGAKYPLHIAASHPFNRLHSQLNGTVLREGYAVQGHEPCLMHPDDAAARGIADGDVVRVHNDRGQILTGVKVTDAVMKGVIQIYEGGWYDPSDVTEPGTLDKYGDVNVLSADIGTSKLAQGNCGQTVLAEVEKYTGPAVTLTGFVAPKAAE 823
               SCOP domains d1h5nc2 C:3-625 Dimethylsulfoxide reductase (DMSO reductase)                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   d1h5nc1 C:626-781 Dimethylsulfoxide reductase (DMSO reductase)                                                                                               SCOP domains
               CATH domains --1h5nC03                     ---------------------1h5nC01 C:54-145,C:378-481,C:507-529  [code=3.40.50.740, no name defined]                   -1h5nC02 C:147-366,C:579-604 Dimethylsulfoxide Reductase, domain 2                                                                                                                                                           -----------1h5             nC01 C:54-145,C:378-481,C:507-529  [code=3.40.50.740, no name defined]                  1h5nC03           -------1h5nC01                1h5nC03 C:5-32,C:482-499,C:530-570       --------1h5nC02                   -------1h5nC04 C:612-774  [code=2.40.40.20, no name defined]                                                                                                              ------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeeee..eeeeeeee..eeeeeee.........hhhhhhhhhhh.......eeehhhhhhhhhhhhhhh....eee.hhhhhhhhhhhhhhhhhhhhh...ee.............hhhhhhhhhhhhh.............hhhhhhhhhh..........hhhhhhhhh.eeeee..hhhhhh.........hhhhhhhhhhhh..eeeee....hhhhhhhh.eee.....hhhhhhhhhhhhhhhh...hhhhhhhheehhhhhhhhhh........hhhhhhhhhh.hhhhhhhhhhhhhhh.eeeee.hhhhh...hhhhhhhhhhhhhhhh.......eee.........................-------------....hhhhhhhhhhh...eeee..eeee.....eeeee..hhhhhh.hhhhhhhhhhhh.eeeeee...hhhhhh..eeee..hhhhh.eeeee......eeeee...........hhhhhhhhhhhhh.hhhhhhh..hhhhhhhhhhhhhhhhhhhh.....hhhhhhhhheee....hhhhh..hhhhhhh............ee..hhhhhhhh.........................eeee..............hhhhhhh......eeeehhhhhhhh......eeeee....eeeeeeee.......eee......................hhhhh..................eeeeee.............hhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MOLYBDOPTERIN_PROK---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MOLYBDOPTERIN_PROK_3        ------------------------------------------------------------------------------ PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1h5n C   3 LANGTVMSGSHWGVFTATVENGRATAFTPWEKDPHPSPMLAGVLDSIYSPTRIKYPMVRREFLEKGVNADRSTRGNGDFVRVSWDQALDLVAAEVKRVEETYGPEGVFGGSYGWKSPGRLHNCTTLLRRMLTLAGGYVNGAGDYSTGAAQVIMPHVVGTLEVYEQQTAWPVLAENTEVMVFWAADPIKTSQIGWVIPEHGAYPGLEALKAKGTKVIVIDPVRTKTVEFFGAEHITPKPQTDVAIMLGMAHTLVAEDLYDKDFIANYTSGFDKFLPYLDGETDSTPKTAEWAEGISGVPAETIKELARLFESKRTMLAAGWSMQRMHHGEQAHWMLVTLASMLGQIGLPGGGFGLSYHYSGGGTPSTSGPALAGITDGG-------------ASVIPVARVVDMLENPGAEFDFNGTRSKFPDVKMAYWVGGNPFVHHQDRNRMVKAWEKLETFVVHDFQWTPTARHADIVLPATTSYERNDIETIGDYSNTGILAMKKIVEPLYEARSDYDIFAAVAERLGKGAEFTEGKDEMGWIKSFYDDAAKQGKAAGVQMPAFDAFWAEGIVEFPVTDGADFVRYASFREDPLLNPLGTPTGLIEIYSKNIEKMGYDDCPAHPTWMEPLERLDGPGAKYPLHIAASHPFNRLHSQLNGTVLREGYAVQGHEPCLMHPDDAAARGIADGDVVRVHNDRGQILTGVKVTDAVMKGVIQIYEGGWYDPSDVTEPGTLDKYGDVNVLSADIGTSKLAQGNCGQTVLAEVEKYTGPAVTLTGFVAPKAAE 781
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       | -         - |     402       412       422       432       442       452       462       472       482       492       502       512       522       532       542       552       562       572       582       592       602       612       622       632       642       652       662       672       682       692       702       712       722       732       742       752       762       772         
                                                                                                                                                                                                                                                                                                                                                                                                                   380           394

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

(no "Pfam Domain" information available for 1H5N)

Asymmetric Unit(hide GO term definitions)

Chain A,C (DSTOR_RHOCA | Q52675)

molecular function
	GO:0009055	electron carrier activity	Any molecular entity that serves as an electron acceptor and electron donor in an electron transport chain. An electron transport chain is a process in which a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient.
	GO:0046872	metal ion binding	Interacting selectively and non-covalently with any metal ion.
	GO:0030151	molybdenum ion binding	Interacting selectively and non-covalently with molybdenum (Mo) ions.
	GO:0016491	oxidoreductase activity	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
	GO:0050626	trimethylamine-N-oxide reductase (cytochrome c) activity	Catalysis of the reaction: trimethylamine + 2 (ferricytochrome c)-subunit + H2O = trimethylamine-N-oxide + 2 (ferrocytochrome c)-subunit + 2 H+.
biological process
	GO:0055114	oxidation-reduction process	A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
cellular component
	GO:0042597	periplasmic space	The region between the inner (cytoplasmic) and outer membrane (Gram-negative Bacteria) or cytoplasmic membrane and cell wall (Fungi and Gram-positive Bacteria).

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	Cis Peptide Bonds
(no "Cis Peptide Bonds" information available for 1h5n)

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		Domain Information	:	XDom
		Interatomic Contacts of Structural Units	:	CSU
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	DSTOR_RHOCA \| Q52675
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UniProtKB/Swiss-Prot
	DSTOR_RHOCA \| Q52675	:	1dmr 1dms 1e18 1e5v 1e60 1e61 2dmr 3dmr 4dmr

1dmr	OXIDIZED DMSO REDUCTASE FROM RHODOBACTER CAPSULATUS
1e18	TUNGSTEN-SUSBSTITUTED DMSO REDUCTASE FROM RHODOBACTER CAPSULATUS
1e5v	OXIDIZED DMSO REDUCTASE EXPOSED TO HEPES BUFFER
1e60	OXIDIZED DMSO REDUCTASE EXPOSED TO HEPES - STRUCTURE II BUFFER
1e61	OXIDIZED DMSO REDUCTASE EXPOSED TO HEPES - STRUCTURE II BUFFER
2dmr	DITHIONITE REDUCED DMSO REDUCTASE FROM RHODOBACTER CAPSULATUS
3dmr	STRUCTURE OF DMSO REDUCTASE FROM RHODOBACTER CAPSULATUS AT PH 7.0
4dmr	REDUCED DMSO REDUCTASE FROM RHODOBACTER CAPSULATUS WITH BOUND DMSO SUBSTRATE

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (3, 8)

Sites (8, 8)

SS Bonds (0, 0)

Cis Peptide Bonds (0, 0)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (2, 4)

Exons (0, 0)

Sequences/Alignments

Classification and Annotation

SCOP Domains (2, 4)

CATH Domains (4, 8)

Pfam Domains (0, 0)

Gene Ontology (7, 7)

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Databases

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Related Entries

Entries Sharing at Least One Protein Chain (UniProt ID)

Related Entries Specified in the PDB File