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(-) Description

Title :  SOLUTION STRUCTURE OF GAMMA 1-H AND GAMMA 1-P THIONINS FROM BARLEY AND WHEAT ENDOSPERM DETERMINED BY 1H-NMR: A STRUCTURAL MOTIF COMMON TO TOXIC ARTHROPOD PROTEINS
 
Authors :  M. Bruix, M. A. Jimenez, J. Santoro, C. Gonzalez, F. J. Colilla, E. Mendez, M. Rico
Date :  29 Jul 92  (Deposition) - 31 Oct 93  (Release) - 24 Feb 09  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (8x)
Keywords :  Plant Toxin (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  M. Bruix, M. A. Jimenez, J. Santoro, C. Gonzalez, F. J. Colilla, E. Mendez, M. Rico
Solution Structure Of Gamma 1-H And Gamma 1-P Thionins From Barley And Wheat Endosperm Determined By 1H-Nmr: A Structural Motif Common To Toxic Arthropod Proteins.
Biochemistry V. 32 715 1993
PubMed-ID: 8380707  |  Reference-DOI: 10.1021/BI00053A041
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - GAMMA-1-P THIONIN
    Chains: A
    Engineered: YES
    Organism Scientific: TRITICUM TURGIDUM
    Organism Taxid: 4571

 Structural Features

(-) Chains, Units

  
NMR Structure (8x): 

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

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(-) Sites  (0, 0)

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(-) SS Bonds  (4, 4)

NMR Structure
No.Residues
1A:3 -A:47
2A:14 -A:34
3A:20 -A:41
4A:24 -A:43

(-) Cis Peptide Bonds  (0, 0)

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 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

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(-) PROSITE Motifs  (1, 1)

NMR Structure (1, 1)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1GAMMA_THIONINPS00940 Gamma-thionins family signature.DEF1_WHEAT1-24  1A:1-24

(-) Exons   (0, 0)

(no "Exon" information available for 1GPS)

(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:47
 aligned with DEF1_WHEAT | P20158 from UniProtKB/Swiss-Prot  Length:47

    Alignment length:47
                                    10        20        30        40       
            DEF1_WHEAT    1 KICRRRSAGFKGPCMSNKNCAQVCQQEGWGGGNCDGPFRRCKCIRQC 47
               SCOP domains d1gpsa_ A: gamma-Thionin                        SCOP domains
               CATH domains 1gpsA00 A:1-47                                  CATH domains
               Pfam domains ----------------------------------------------- Pfam domains
         Sec.struct. author eeeeee.........hhhhhhhhhhhhh..eeee....eeeeeeeee Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------- SAPs(SNPs)
                    PROSITE GAMMA_THIONIN           ----------------------- PROSITE
                 Transcript ----------------------------------------------- Transcript
                  1gps A  1 KICRRRSAGFKGPCMSNKNCAQVCQQEGWGGGNCDGPFRRCKCIRQC 47
                                    10        20        30        40
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 Classification and Annotation

(-) SCOP Domains  (1, 1)

NMR Structure
(-)
Class: Small proteins (3458)

(-) CATH Domains  (1, 1)

NMR Structure
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 1GPS)

(-) Gene Ontology  (3, 3)

NMR Structure(hide GO term definitions)
Chain A   (DEF1_WHEAT | P20158)
biological process
    GO:0006952    defense response    Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack.
    GO:0050832    defense response to fungus    Reactions triggered in response to the presence of a fungus that act to protect the cell or organism.
    GO:0031640    killing of cells of other organism    Any process in an organism that results in the killing of cells of another organism, including in some cases the death of the other organism. Killing here refers to the induction of death in one cell by another cell, not cell-autonomous death due to internal or other environmental conditions.

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