Chain A from PDB Type:PROTEIN Length:151
aligned with TCPG_MOUSE | P80318 from UniProtKB/Swiss-Prot Length:545
Alignment length:162
223 233 243 253 263 273 283 293 303 313 323 333 343 353 363 373
TCPG_MOUSE 214 VLRGVMINKDVTHPRMRRYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIHQLCEDIIQLKPDVVITEKGISDLAQHYLMRANVTAIRRVRKTDNNRIARACGARIVSRPEELREDDVGTGAGLLEIKKIGDEYFTFITDCKDPKACTIL 375
SCOP domains d1gn1a_ A: Thermosome, A-domain SCOP domains
CATH domains 1gn1A00 A:214-375 GroEL CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author ..eeeee...........eee...eeee........-----------.hhhhhhhhhhhhhhhhhhhhhhh....eeee....hhhhhhhhhh...eee...hhhhhhhhhhhhh.....hhhhhhhhhh...eeeeeeeee..eeeeeeeee......ee. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
1gn1 A 214 VLRGVMINKDVTHPRMRRYIKNPRIVLLDSSLEYKK-----------EEDFTRILQMEEEYIHQLCEDIIQLKPDVVITEKGISDLAQHYLMRANVTAIRRVRKTDNNRIARACGARIVSRPEELREDDVGTGAGLLEIKKIGDEYFTFITDCKDPKACTIL 375
223 233 243 | - 263 273 283 293 303 313 323 333 343 353 363 373
249 261
Chain B from PDB Type:PROTEIN Length:146
aligned with TCPG_MOUSE | P80318 from UniProtKB/Swiss-Prot Length:545
Alignment length:168
220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370
TCPG_MOUSE 211 DSCVLRGVMINKDVTHPRMRRYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIHQLCEDIIQLKPDVVITEKGISDLAQHYLMRANVTAIRRVRKTDNNRIARACGARIVSRPEELREDDVGTGAGLLEIKKIGDEYFTFITDCKDPKACTILLRG 378
SCOP domains d1gn1b_ B: Thermosome, A-domain SCOP domains
CATH domains 1gn1B00 B:211-378 GroEL CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author ....eeeeee...........eee...eeee.......----------------------..hhhhhhhhhhhhh...eeee....hhhhhhhhhhh..eee...hhhhhhhhhhhhh....................eeeeeee..eeeeeee........eeee.. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
1gn1 B 211 DSCVLRGVMINKDVTHPRMRRYIKNPRIVLLDSSLEYK----------------------EEEYIHQLCEDIIQLKPDVVITEKGISDLAQHYLMRANVTAIRRVRKTDNNRIARACGARIVSRPEELREDDVGTGAGLLEIKKIGDEYFTFITDCKDPKACTILLRG 378
220 230 240 | - - -| 280 290 300 310 320 330 340 350 360 370
248 271
Chain C from PDB Type:PROTEIN Length:140
aligned with TCPG_MOUSE | P80318 from UniProtKB/Swiss-Prot Length:545
Alignment length:165
220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370
TCPG_MOUSE 211 DSCVLRGVMINKDVTHPRMRRYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIHQLCEDIIQLKPDVVITEKGISDLAQHYLMRANVTAIRRVRKTDNNRIARACGARIVSRPEELREDDVGTGAGLLEIKKIGDEYFTFITDCKDPKACTIL 375
SCOP domains d1gn1c_ C: Thermosome, A-domain SCOP domains
CATH domains 1gn1C00 C:211-375 GroEL CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .....eeeee...........eee...eeee......-------------------------hhhhhhhhhhhhhh..eeee....hhhhhhhhhhh..eee...hhhhhhhhhhhhh..........hhhhh...eeeeeeeee..eeeeeeeee......ee. Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1gn1 C 211 DSCVLRGVMINKDVTHPRMRRYIKNPRIVLLDSSLEY-------------------------EYIHQLCEDIIQLKPDVVITEKGISDLAQHYLMRANVTAIRRVRKTDNNRIARACGARIVSRPEELREDDVGTGAGLLEIKKIGDEYFTFITDCKDPKACTIL 375
220 230 240 | - - - | 280 290 300 310 320 330 340 350 360 370
247 273
Chain D from PDB Type:PROTEIN Length:146
aligned with TCPG_MOUSE | P80318 from UniProtKB/Swiss-Prot Length:545
Alignment length:165
223 233 243 253 263 273 283 293 303 313 323 333 343 353 363 373
TCPG_MOUSE 214 VLRGVMINKDVTHPRMRRYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIHQLCEDIIQLKPDVVITEKGISDLAQHYLMRANVTAIRRVRKTDNNRIARACGARIVSRPEELREDDVGTGAGLLEIKKIGDEYFTFITDCKDPKACTILLRG 378
SCOP domains d1gn1d_ D: Thermosome, A-domain SCOP domains
CATH domains 1gn1D00 D:214-378 GroEL CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eeeeee...........eee...eeee......-------------------.hhhhhhhhhhhhhhhhh....eeee....hhhhhhhhhhh..eee...hhhhhhhhhhhhh.....hhhhhhhhhh...eeeeeeeee..eeeeeeeee......eeee.. Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1gn1 D 214 VLRGVMINKDVTHPRMRRYIKNPRIVLLDSSLEY-------------------ILQMEEEYIHQLCEDIIQLKPDVVITEKGISDLAQHYLMRANVTAIRRVRKTDNNRIARACGARIVSRPEELREDDVGTGAGLLEIKKIGDEYFTFITDCKDPKACTILLRG 378
223 233 243 | - - | 273 283 293 303 313 323 333 343 353 363 373
247 267
Chain E from PDB Type:PROTEIN Length:135
aligned with TCPG_MOUSE | P80318 from UniProtKB/Swiss-Prot Length:545
Alignment length:160
225 235 245 255 265 275 285 295 305 315 325 335 345 355 365 375
TCPG_MOUSE 216 RGVMINKDVTHPRMRRYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIHQLCEDIIQLKPDVVITEKGISDLAQHYLMRANVTAIRRVRKTDNNRIARACGARIVSRPEELREDDVGTGAGLLEIKKIGDEYFTFITDCKDPKACTIL 375
SCOP domains d1gn1e_ E: Thermosome, A-domain SCOP domains
CATH domains 1gn1E00 E:216-375 GroEL CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eeee...........eee...eeee......-------------------------.hhhhhhhhhhh....eeee....hhhhhhhhhhh..eee...hhhhhhhhhhhhh.....hhhhhhhhhh...eeeeeeeee..eeeeeeeee......... Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1gn1 E 216 RGVMINKDVTHPRMRRYIKNPRIVLLDSSLEY-------------------------EYIHQLCEDIIQLKPDVVITEKGISDLAQHYLMRANVTAIRRVRKTDNNRIARACGARIVSRPEELREDDVGTGAGLLEIKKIGDEYFTFITDCKDPKACTIL 375
225 235 245 | - - 275 285 295 305 315 325 335 345 355 365 375
247 273
Chain F from PDB Type:PROTEIN Length:152
aligned with TCPG_MOUSE | P80318 from UniProtKB/Swiss-Prot Length:545
Alignment length:165
222 232 242 252 262 272 282 292 302 312 322 332 342 352 362 372
TCPG_MOUSE 213 CVLRGVMINKDVTHPRMRRYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIHQLCEDIIQLKPDVVITEKGISDLAQHYLMRANVTAIRRVRKTDNNRIARACGARIVSRPEELREDDVGTGAGLLEIKKIGDEYFTFITDCKDPKACTILLR 377
SCOP domains d1gn1f_ F: Thermosome, A-domain SCOP domains
CATH domains 1gn1F00 F:213-377 GroEL CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..eeeeee...........eee...eeee........-------------........hhhhhhhhhhhhhhh...eeee....hhhhhhhhhhh..eee...hhhhhhhhhhhhh.....hhhhh........eeeeeeeee..eeeeeeeee.hhhhh.eee. Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1gn1 F 213 CVLRGVMINKDVTHPRMRRYIKNPRIVLLDSSLEYKK-------------DFTRILQMEEEYIHQLCEDIIQLKPDVVITEKGISDLAQHYLMRANVTAIRRVRKTDNNRIARACGARIVSRPEELREDDVGTGAGLLEIKKIGDEYFTFITDCKDPKACTILLR 377
222 232 242 | - -| 272 282 292 302 312 322 332 342 352 362 372
249 263
Chain G from PDB Type:PROTEIN Length:153
aligned with TCPG_MOUSE | P80318 from UniProtKB/Swiss-Prot Length:545
Alignment length:166
221 231 241 251 261 271 281 291 301 311 321 331 341 351 361 371
TCPG_MOUSE 212 SCVLRGVMINKDVTHPRMRRYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIHQLCEDIIQLKPDVVITEKGISDLAQHYLMRANVTAIRRVRKTDNNRIARACGARIVSRPEELREDDVGTGAGLLEIKKIGDEYFTFITDCKDPKACTILLR 377
SCOP domains d1gn1g_ G: Thermosome, A-domain SCOP domains
CATH domains 1gn1G00 G:212-377 GroEL CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ....eeeee...........eee...eeee.......-------------.hhhhhhhhhhhhhhhhhhhhhh....eeee....hhhhhhhhhhh..eee...hhhhhhhhhhhhh.....hhhhh........eeeeeeeee..eeeeeeeee......ee... Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1gn1 G 212 SCVLRGVMINKDVTHPRMRRYIKNPRIVLLDSSLEYK-------------EDFTRILQMEEEYIHQLCEDIIQLKPDVVITEKGISDLAQHYLMRANVTAIRRVRKTDNNRIARACGARIVSRPEELREDDVGTGAGLLEIKKIGDEYFTFITDCKDPKACTILLR 377
221 231 241 | - -| 271 281 291 301 311 321 331 341 351 361 371
248 262
Chain H from PDB Type:PROTEIN Length:145
aligned with TCPG_MOUSE | P80318 from UniProtKB/Swiss-Prot Length:545
Alignment length:162
224 234 244 254 264 274 284 294 304 314 324 334 344 354 364 374
TCPG_MOUSE 215 LRGVMINKDVTHPRMRRYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIHQLCEDIIQLKPDVVITEKGISDLAQHYLMRANVTAIRRVRKTDNNRIARACGARIVSRPEELREDDVGTGAGLLEIKKIGDEYFTFITDCKDPKACTILL 376
SCOP domains d1gn1h_ H: Thermosome, A-domain SCOP domains
CATH domains 1gn1H00 H:215-376 GroEL CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author .eeeee...........eee...eeee......-----------------.hhhhhhhhhhhhhhhhhhhh...eeee....hhhhhhhhhhh..eee...hhhhhhhhhhhhh.....hhhhhhhhhh...eeeeeeeee..eeeeeeeee......ee.. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
1gn1 H 215 LRGVMINKDVTHPRMRRYIKNPRIVLLDSSLEY-----------------TRILQMEEEYIHQLCEDIIQLKPDVVITEKGISDLAQHYLMRANVTAIRRVRKTDNNRIARACGARIVSRPEELREDDVGTGAGLLEIKKIGDEYFTFITDCKDPKACTILL 376
224 234 244 | - -| 274 284 294 304 314 324 334 344 354 364 374
247 265
Legend: |
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→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |