1G8J - JenaLib

Asymmetric Unit (Jmol Viewer)

Asym. Unit - sites (Jmol Viewer)

Biological Unit 1 (Jmol Viewer)

Biol. Unit 1 - sites (Jmol Viewer)

Biological Unit 2 (Jmol Viewer)

Title :   CRYSTAL STRUCTURE ANALYSIS OF ARSENITE OXIDASE FROM ALCALIGENES FAECALIS

Authors :   P. J. Ellis, T. Conrads, R. Hille, P. Kuhn

Date :   17 Nov 00 (Deposition) - 13 Dec 00 (Release) - 24 Feb 09 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.03

Chains :   Asym. Unit : A,B,C,D
Biol. Unit 1: A,B  (1x)
Biol. Unit 2: C,D  (1x)

Keywords :   Oxidase, Arsenite, Molybdopterin, [3Fe-4S] Cluster, [2Fe- 2S] Cluster, Rieske, Oxidoreductase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   P. J. Ellis, T. Conrads, R. Hille, P. Kuhn
Crystal Structure Of The 100 Kda Arsenite Oxidase From Alcaligenes Faecalis In Two Crystal Forms At 1. 64 A And 2. 03 A.
Structure V. 9 125 2001
PubMed-ID: 11250197 | Reference-DOI: 10.1016/S0969-2126(01)00566-4
(for further references see the PDB file header)

Molecule 1 - ARSENITE OXIDASE
	Chains	:	A, C
	Fragment	:	LARGE SUBUNIT
	Organism Scientific	:	ALCALIGENES FAECALIS
	Organism Taxid	:	511
	Strain	:	NCIB 8687

Molecule 2 - ARSENITE OXIDASE
	Chains	:	B, D
	Fragment	:	RIESKE SUBUNIT
	Organism Scientific	:	ALCALIGENES FAECALIS
	Organism Taxid	:	511
	Strain	:	NCIB 8687

		1	2	3	4
Asymmetric Unit	:	A	B	C	D
Biological Unit 1 (1x)	:	A	B
Biological Unit 2 (1x)	:			C	D

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (5, 12)

No.	Name	Count	Type	Full Name
1	4MO	2	Ligand/Ion	MOLYBDENUM(IV) ION
2	F3S	2	Ligand/Ion	FE3-S4 CLUSTER
3	FES	2	Ligand/Ion	FE2/S2 (INORGANIC) CLUSTER
4	MGD	4	Ligand/Ion	2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINEDINUCLEOTIDE
5	O	2	Ligand/Ion	OXYGEN ATOM

Biological Unit 1 (4, 5)

No.	Name	Count	Type	Full Name
1	4MO	1	Ligand/Ion	MOLYBDENUM(IV) ION
2	F3S	1	Ligand/Ion	FE3-S4 CLUSTER
3	FES	1	Ligand/Ion	FE2/S2 (INORGANIC) CLUSTER
4	MGD	2	Ligand/Ion	2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINEDINUCLEOTIDE
5	O	-1	Ligand/Ion	OXYGEN ATOM

Biological Unit 2 (4, 5)

No.	Name	Count	Type	Full Name
1	4MO	1	Ligand/Ion	MOLYBDENUM(IV) ION
2	F3S	1	Ligand/Ion	FE3-S4 CLUSTER
3	FES	1	Ligand/Ion	FE2/S2 (INORGANIC) CLUSTER
4	MGD	2	Ligand/Ion	2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINEDINUCLEOTIDE
5	O	-1	Ligand/Ion	OXYGEN ATOM

Asymmetric Unit (12, 12)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	GLY A:170 , HIS A:195 , ASN A:196 , LYS A:385 , TRP A:389 , HIS A:423 , GLY A:456 , CYS A:457 , ASN A:458 , THR A:462 , ILE A:513 , ASN A:514 , LEU A:515 , THR A:518 , ALA A:530 , ALA A:531 , ASP A:563 , ASN A:700 , ARG A:702 , GLN A:708 , THR A:709 , TYR A:711 , PHE A:774 , GLN A:781 , THR A:785 , TYR A:797 , LYS A:798 , MGD A:2002 , O A:2003 , 4MO A:2004 , HOH A:2008 , HOH A:2022 , HOH A:2061 , HOH A:2105 , HOH A:2116 , HOH A:2222	BINDING SITE FOR RESIDUE MGD A 2001
02	AC2	SOFTWARE	ARG A:101 , GLY A:232 , ASN A:233 , ASN A:234 , GLU A:237 , SER A:238 , GLN A:239 , VAL A:276 , ASP A:277 , PRO A:278 , ARG A:279 , THR A:281 , GLY A:304 , ASP A:306 , GLU A:384 , LYS A:385 , GLY A:386 , GLY A:422 , TRP A:697 , ASN A:699 , GLY A:701 , ARG A:702 , ASN A:703 , ASN A:704 , VAL A:706 , TRP A:707 , GLN A:708 , LYS A:798 , MGD A:2001 , O A:2003 , 4MO A:2004 , HOH A:2006 , HOH A:2015 , HOH A:2070	BINDING SITE FOR RESIDUE MGD A 2002
03	AC3	SOFTWARE	ASN A:196 , LYS A:385 , MGD A:2001 , MGD A:2002 , 4MO A:2004 , HOH A:2192	BINDING SITE FOR RESIDUE O A 2003
04	AC4	SOFTWARE	MGD A:2001 , MGD A:2002 , O A:2003	BINDING SITE FOR RESIDUE 4MO A 2004
05	AC5	SOFTWARE	CYS A:21 , CYS A:24 , GLY A:27 , CYS A:28 , TYR A:30 , SER A:99 , ARG A:101 , ASN A:241	BINDING SITE FOR RESIDUE F3S A 2005
06	AC6	SOFTWARE	CYS B:60 , HIS B:62 , MET B:63 , CYS B:78 , HIS B:81 , THR B:83	BINDING SITE FOR RESIDUE FES B 2006
07	AC7	SOFTWARE	GLY C:170 , HIS C:195 , ASN C:196 , LYS C:385 , TRP C:389 , HIS C:423 , GLY C:456 , CYS C:457 , ASN C:458 , THR C:462 , ILE C:513 , ASN C:514 , LEU C:515 , ALA C:530 , ALA C:531 , ASP C:563 , ASN C:700 , ARG C:702 , GLN C:708 , THR C:709 , TYR C:711 , PHE C:774 , GLN C:781 , THR C:785 , TYR C:797 , LYS C:798 , MGD C:3002 , O C:3003 , 4MO C:3004 , HOH C:3012 , HOH C:3064 , HOH C:3075 , HOH C:3077 , HOH C:3104 , HOH C:3148	BINDING SITE FOR RESIDUE MGD C 3001
08	AC8	SOFTWARE	CYS C:24 , ARG C:101 , GLY C:232 , ASN C:233 , ASN C:234 , GLU C:237 , SER C:238 , GLN C:239 , VAL C:276 , ASP C:277 , PRO C:278 , ARG C:279 , THR C:281 , GLY C:304 , ASP C:306 , GLU C:384 , LYS C:385 , GLY C:386 , ILE C:387 , GLY C:421 , GLY C:422 , HIS C:423 , TRP C:697 , ASN C:699 , GLY C:701 , ARG C:702 , ASN C:703 , ASN C:704 , VAL C:706 , TRP C:707 , GLN C:708 , LYS C:798 , MGD C:3001 , O C:3003 , 4MO C:3004 , HOH C:3041 , HOH C:3053 , HOH C:3059	BINDING SITE FOR RESIDUE MGD C 3002
09	AC9	SOFTWARE	LYS C:385 , GLY C:422 , MGD C:3001 , MGD C:3002 , 4MO C:3004 , HOH C:3133	BINDING SITE FOR RESIDUE O C 3003
10	BC1	SOFTWARE	MGD C:3001 , MGD C:3002 , O C:3003	BINDING SITE FOR RESIDUE 4MO C 3004
11	BC2	SOFTWARE	CYS C:21 , CYS C:24 , GLY C:27 , CYS C:28 , TYR C:30 , SER C:99 , ARG C:101 , ASN C:241	BINDING SITE FOR RESIDUE F3S C 3005
12	BC3	SOFTWARE	CYS D:60 , HIS D:62 , MET D:63 , CYS D:78 , HIS D:81 , THR D:83	BINDING SITE FOR RESIDUE FES D 3006

Asymmetric Unit

No.	Residues
1	B:65	-	B:80
2	D:65	-	D:80

Asymmetric Unit

No.	Residues
1	Leu A:643	-	Pro A:644
2	Tyr B:27	-	Pro B:28
3	Leu C:643	-	Pro C:644
4	Tyr D:27	-	Pro D:28

(no "SAP(SNP)/Variant" information available for 1G8J)

Asymmetric Unit (1, 2)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	RIESKE	PS51296	Rieske [2Fe-2S] iron-sulfur domain profile.	AIOB_ALCFA	62-158	2	B:20-116 D:20-116

Biological Unit 1 (1, 1)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	RIESKE	PS51296	Rieske [2Fe-2S] iron-sulfur domain profile.	AIOB_ALCFA	62-158	1	B:20-116 -

Biological Unit 2 (1, 1)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	RIESKE	PS51296	Rieske [2Fe-2S] iron-sulfur domain profile.	AIOB_ALCFA	62-158	1	- D:20-116

(no "Exon" information available for 1G8J)

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:820
 aligned with AIOA_ALCFA | Q7SIF4 from UniProtKB/Swiss-Prot  Length:826

    Alignment length:820
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       386       396       406       416       426       436       446       456       466       476       486       496       506       516       526       536       546       556       566       576       586       596       606       616       626       636       646       656       666       676       686       696       706       716       726       736       746       756       766       776       786       796       806       816       826
           AIOA_ALCFA     7 RITLPPANAQRTNMTCHFCIVGCGYHVYKWPELQEGGRAPEQNALGLDFRKQLPPLAVTLTPAMTNVVTEHNGRRYNIMVVPDKACVVNSGLSSTRGGKMASYMYTPTGDGKQRLKAPRLYAADQWVDTTWDHAMALYAGLIKKTLDKDGPQGVFFSCFDHGGAGGGFENTWGTGKLMFSAIQTPMVRIHNRPAYNSECHATREMGIGELNNAYEDAQLADVIWSIGNNPYESQTNYFLNHWLPNLQGATTSKKKERFPNENFPQARIIFVDPRETPSVAIARHVAGNDRVLHLAIEPGTDTALFNGLFTYVVEQGWIDKPFIEAHTKGFDDAVKTNRLSLDECSNITGVPVDMLKRAAEWSYKPKASGQAPRTMHAYEKGIIWGNDNYVIQSALLDLVIATHNVGRRGTGCVRMGGHQEGYTRPPYPGDKKIYIDQELIKGKGRIMTWWGCNNFQTSNNAQALREAILQRSAIVKQAMQKARGATTEEMVDVIYEATQNGGLFVTSINLYPTKLAEAAHLMLPAAHPGEMNLTSMNGERRIRLSEKFMDPPGTAMADCLIAARIANALRDMYQKDGKAEMAAQFEGFDWKTEEDAFNDGFRRAGQPGAPAIDSQGGSTGHLVTYDRLRKSGNNGVQLPVVSWDESKGLVGTEMLYTEGKFDTDDGKAHFKPAPWNGLPATVQQQKDKYRFWLNNGRNNEVWQTAYHDQYNSLMQERYPMAYIEMNPDDCKQLDVTGGDIVEVYNDFGSTFAMVYPVAEIKRGQTFMLFGYVNGIQGDVTTDWTDRNIIPYYKGTWGDIRKVGSMEEFKRTVSFKSRRFA 826
               SCOP domains d1g8ja2 A:6-682 Arsenite oxidase large subunit                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       d1g8ja1 A:683-825 Arsenite oxidase large subunit                                                                                                SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------1g8jA02 A:120-201,A:424-531,A:559-621  [code=3.40.50.740, no name defined]        1g8jA03 A:202-423,A:658-682 Dimethylsulfoxide Reductase, domain 2                                                                                                                                                             1g8jA02 A:120-201,A:424-531,A:559-621  [code=3.40.50.740, no name defined]                                  ---------------------------1g8jA02 A:120-201,A:424-531,A:559-621                          ------------------------------------1g8jA03                  1g8jA04 A:683-817  [code=2.40.40.20, no name defined]                                                                                  -------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .........eeeeee........eeeeeeee.......hhhh..................hhh.eeeee.....eeeeeeee.............hhhhh..................eee....eee.hhhhhhhhhhhhhhhhhhhhhhh.eeeee........hhhhhhhhhhhhhh......eee.........hhhhhhh.........hhhhhh.eeeee..hhhhhhhhhhhhhhhhhhh..hhhhhhhhh........eeeee....hhhhhhhhhhhh...eeee.....hhhhhhhhhhhhhhhhh..hhhhhhhheehhhhhhhhh..hhhhhhhhhh.hhhhhhhhhhhhhh.........eeeeehhhhhh..hhhhhhhhhhhhhhhh.........eee........ee.........hhhhhhhh....eeeee..hhhhhh.hhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhh....eeeeee...hhhhhh..eeee........eeee....eeeee...........hhhhhhhhhhhhhhhhhhhh.hhhhhhh.......hhhhhhhhhhhhh........ee.hhhhhhhhhhhhhhhhhhhhee....eee...eee.................ee.........hhhhhhhhhhh.eeeeee..........hhhhhhhhhhhh...eeeehhhhhhhhh....eeeeee....eeeeeeee.......eeeee......hhhhhh...............eeeeeeeeehhhhhhhh........ Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1g8j A   6 RITLPPANAQRTNMTCHFCIVGCGYHVYKWPELEEGGRAPEQNALGLDFRKQLPPLASTLTPAMTNVVTEHDGARYDIMVVPDKACVVNSGLSSTRGGKMASYMYTPTGDGKERLSAPRLYAADEWVDTTWDHAMALYAGLIKKTLDSDGPQGVFFSCFDHGGAGGGFENTWGTGKLMFSAIQTPMVRIHNRPAYNSECHATREMGIGELNNAYEDAQLADVIWSIGNNPYESQTNYFLNHWLPNLQGATTSKKKERFPNENFPQARIIFVDPRETPSVAIARHVAGNDRVLHLAIEPGTDTALFNGLFTYVVEQGWIDKPFIEAHTKGFDDAVKTNRLSLDECSNITGVPVDMLKRAAEWSYKPKASGQAPRTMHAYEKGIIWGNDNYVIQSALLDLVIATHNVGRRGTGCVRMGGHQEGYTRPPYPGDKKIYIDQELIKGKGRIMTWWGCNNFQTSNNAQALREAILQRSAIVKQAMQKARGATTEEMVDVIYEATQNGGLFVTSINLYPTKLAEAAHLMLPAAHPGEMNLTSMNGERRIRLSEKFMDPPGTAMADCLIAARIANALRDMYQKDGKAEMAAQFEGFDWKTEEDAFNDGFRRAGQPGAPAIDSQGGSTGHLVTYDRLRKSGNNGVQLPVVSWDESKGLVGTEMLYTEGKFDTDDGKAHFKPAPWNGLPATVQQQKDKYRFWLNNGRNNEVWQTAYHDQYNSLMQERYPMAYIEMNPDDCKQLDVTGGDIVEVYNDFGSTFAMVYPVAEIKRGQTFMLFGYVNGIQGDVTTDWTDRDIIPYYKGTWGDIRKVGSMSEFKRTVSFKSRRFG 825
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415       425       435       445       455       465       475       485       495       505       515       525       535       545       555       565       575       585       595       605       615       625       635       645       655       665       675       685       695       705       715       725       735       745       755       765       775       785       795       805       815       825

Chain B from PDB  Type:PROTEIN  Length:128
 aligned with AIOB_ALCFA | Q7SIF3 from UniProtKB/Swiss-Prot  Length:175

    Alignment length:128
                                    57        67        77        87        97       107       117       127       137       147       157       167        
           AIOB_ALCFA    48 YPATQVSVAKNLKANEPVSFTYPDTSSPCVAVKLGSPVPGGVGPNNDIVAYSVLCTHMGCPTSYDKSSKTFKCPCHFTEFDAEKAGQMICGQATENLPRVLLRYDEASDALTAVGVDGLIYGRQANVI 175
               SCOP domains d1g8jb_ B: Arsenite oxidase Rieske subunit                                                                                       SCOP domains
               CATH domains 1g8jB00 B:6-133 'Rieske'-like iron-sulphur domains                                                                               CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeee.hhh.....eeee......eeeeee..............eeeee..........eee....eee......eee......eee........eeeeeee....eeeeeeee........... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------RIESKE  PDB: B:20-116 UniProt: 62-158                                                            ----------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1g8j B   6 YPATAVSVAKNLAANEPSSFTYPDTSSPCVAVKLGAPVPGGVGPDDDIVAYSVLCTHMGCPTSYDSSSKTFSCPCHFTEFDAEKAGQMICGEATADLPRVLLRYDAASDALTAVGVDGLIYGRQANVI 133
                                    15        25        35        45        55        65        75        85        95       105       115       125

Chain C from PDB  Type:PROTEIN  Length:821
 aligned with AIOA_ALCFA | Q7SIF4 from UniProtKB/Swiss-Prot  Length:826

    Alignment length:821
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415       425       435       445       455       465       475       485       495       505       515       525       535       545       555       565       575       585       595       605       615       625       635       645       655       665       675       685       695       705       715       725       735       745       755       765       775       785       795       805       815       825 
           AIOA_ALCFA     6 DRITLPPANAQRTNMTCHFCIVGCGYHVYKWPELQEGGRAPEQNALGLDFRKQLPPLAVTLTPAMTNVVTEHNGRRYNIMVVPDKACVVNSGLSSTRGGKMASYMYTPTGDGKQRLKAPRLYAADQWVDTTWDHAMALYAGLIKKTLDKDGPQGVFFSCFDHGGAGGGFENTWGTGKLMFSAIQTPMVRIHNRPAYNSECHATREMGIGELNNAYEDAQLADVIWSIGNNPYESQTNYFLNHWLPNLQGATTSKKKERFPNENFPQARIIFVDPRETPSVAIARHVAGNDRVLHLAIEPGTDTALFNGLFTYVVEQGWIDKPFIEAHTKGFDDAVKTNRLSLDECSNITGVPVDMLKRAAEWSYKPKASGQAPRTMHAYEKGIIWGNDNYVIQSALLDLVIATHNVGRRGTGCVRMGGHQEGYTRPPYPGDKKIYIDQELIKGKGRIMTWWGCNNFQTSNNAQALREAILQRSAIVKQAMQKARGATTEEMVDVIYEATQNGGLFVTSINLYPTKLAEAAHLMLPAAHPGEMNLTSMNGERRIRLSEKFMDPPGTAMADCLIAARIANALRDMYQKDGKAEMAAQFEGFDWKTEEDAFNDGFRRAGQPGAPAIDSQGGSTGHLVTYDRLRKSGNNGVQLPVVSWDESKGLVGTEMLYTEGKFDTDDGKAHFKPAPWNGLPATVQQQKDKYRFWLNNGRNNEVWQTAYHDQYNSLMQERYPMAYIEMNPDDCKQLDVTGGDIVEVYNDFGSTFAMVYPVAEIKRGQTFMLFGYVNGIQGDVTTDWTDRNIIPYYKGTWGDIRKVGSMEEFKRTVSFKSRRFA 826
               SCOP domains d1g8jc2 C:5-682 Arsenite oxidase large subunit                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        d1g8jc1 C:683-825 Arsenite oxidase large subunit                                                                                                SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------1g8jC02 C:120-201,C:424-531,C:559-621  [code=3.40.50.740, no name defined]        1g8jC03 C:202-423,C:658-682 Dimethylsulfoxide Reductase, domain 2                                                                                                                                                             1g8jC02 C:120-201,C:424-531,C:559-621  [code=3.40.50.740, no name defined]                                  ---------------------------1g8jC02 C:120-201,C:424-531,C:559-621                          ------------------------------------1g8jC03                  1g8jC04 C:683-817  [code=2.40.40.20, no name defined]                                                                                  -------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..........eeeeee........eeeeeeee.......hhhhh.................hhh.eeeee.....eeeeeeee.............hhhhhhhhh..............eeee..eeee.hhhhhhhhhhhhhhhhhhhhhhh.eeeee........hhhhhhhhhhhhhh......eee.........hhhhhhh.........hhhhhh.eeeee..hhhhhhhhhhhhhhhhhhh..hhhhhhhhh........eeeee....hhhhhhhhhhhh...eeee.....hhhhhhhhhhhhhhhhh..hhhhhhhheehhhhhhhhh..hhhhhhhhhh.hhhhhhhhhhhhhh.........eeeeehhhhhh..hhhhhhhhhhhhhhhh........eeee........ee.........hhhhhhhhh...eeeee..hhhhhh.hhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhh.....eeeeee...hhhhhh..eeee........eeee....eeeee...........hhhhhhhhhhhhhhhhhhh..hhhhhhhh......hhhhhhhhh............ee.hhhhhhhhhhhhhhhhhhhhee..............................ee.........hhhhhhhhhhh.eeeeee..........hhhhhhhhhhhh...eeeehhhhhhhhh....eeeeeee..eeeeeeeee.......eeeee......hhhhhh...............eeeeeeeeehhhhhhhh........ Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1g8j C   5 DRITLPPANAQRTNMTCHFCIVGCGYHVYKWPELEEGGRAPEQNALGLDFRKQLPPLASTLTPAMTNVVTEHDGARYDIMVVPDKACVVNSGLSSTRGGKMASYMYTPTGDGKERLSAPRLYAADEWVDTTWDHAMALYAGLIKKTLDSDGPQGVFFSCFDHGGAGGGFENTWGTGKLMFSAIQTPMVRIHNRPAYNSECHATREMGIGELNNAYEDAQLADVIWSIGNNPYESQTNYFLNHWLPNLQGATTSKKKERFPNENFPQARIIFVDPRETPSVAIARHVAGNDRVLHLAIEPGTDTALFNGLFTYVVEQGWIDKPFIEAHTKGFDDAVKTNRLSLDECSNITGVPVDMLKRAAEWSYKPKASGQAPRTMHAYEKGIIWGNDNYVIQSALLDLVIATHNVGRRGTGCVRMGGHQEGYTRPPYPGDKKIYIDQELIKGKGRIMTWWGCNNFQTSNNAQALREAILQRSAIVKQAMQKARGATTEEMVDVIYEATQNGGLFVTSINLYPTKLAEAAHLMLPAAHPGEMNLTSMNGERRIRLSEKFMDPPGTAMADCLIAARIANALRDMYQKDGKAEMAAQFEGFDWKTEEDAFNDGFRRAGQPGAPAIDSQGGSTGHLVTYDRLRKSGNNGVQLPVVSWDESKGLVGTEMLYTEGKFDTDDGKAHFKPAPWNGLPATVQQQKDKYRFWLNNGRNNEVWQTAYHDQYNSLMQERYPMAYIEMNPDDCKQLDVTGGDIVEVYNDFGSTFAMVYPVAEIKRGQTFMLFGYVNGIQGDVTTDWTDRDIIPYYKGTWGDIRKVGSMSEFKRTVSFKSRRFG 825
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364       374       384       394       404       414       424       434       444       454       464       474       484       494       504       514       524       534       544       554       564       574       584       594       604       614       624       634       644       654       664       674       684       694       704       714       724       734       744       754       764       774       784       794       804       814       824

Chain D from PDB  Type:PROTEIN  Length:129
 aligned with AIOB_ALCFA | Q7SIF3 from UniProtKB/Swiss-Prot  Length:175

    Alignment length:129
                                    56        66        76        86        96       106       116       126       136       146       156       166         
           AIOB_ALCFA    47 QYPATQVSVAKNLKANEPVSFTYPDTSSPCVAVKLGSPVPGGVGPNNDIVAYSVLCTHMGCPTSYDKSSKTFKCPCHFTEFDAEKAGQMICGQATENLPRVLLRYDEASDALTAVGVDGLIYGRQANVI 175
               SCOP domains d1g8jd_ D: Arsenite oxidase Rieske subunit                                                                                        SCOP domains
               CATH domains 1g8jD00 D:5-133 'Rieske'-like iron-sulphur domains                                                                                CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeee.hhh.....eeee......eeeeee..............eeeee..........eee....eee......eee......eee........eeeeee.....eeeeeeee........... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------RIESKE  PDB: D:20-116 UniProt: 62-158                                                            ----------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1g8j D   5 AYPATAVSVAKNLAANEPSSFTYPDTSSPCVAVKLGAPVPGGVGPDDDIVAYSVLCTHMGCPTSYDSSSKTFSCPCHFTEFDAEKAGQMICGEATADLPRVLLRYDAASDALTAVGVDGLIYGRQANVI 133
                                    14        24        34        44        54        64        74        84        94       104       114       124

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

(no "Pfam Domain" information available for 1G8J)

Asymmetric Unit(hide GO term definitions)

Chain A,C (AIOA_ALCFA | Q7SIF4)

molecular function
	GO:0051538	3 iron, 4 sulfur cluster binding	Interacting selectively and non-covalently with a 3 iron, 4 sulfur (3Fe-4S) cluster; this cluster consists of three iron atoms, with the inorganic sulfur atoms found between the irons and acting as bridging ligands. It is essentially a 4Fe-4S cluster with one iron missing.
	GO:0050611	arsenate reductase (azurin) activity	Catalysis of the reaction: H(2)O + arsenite + 2 oxidized azurin = 2 H(+) + 2 reduced azurin + arsenate.
	GO:0051536	iron-sulfur cluster binding	Interacting selectively and non-covalently with an iron-sulfur cluster, a combination of iron and sulfur atoms.
	GO:0046872	metal ion binding	Interacting selectively and non-covalently with any metal ion.
	GO:0030151	molybdenum ion binding	Interacting selectively and non-covalently with molybdenum (Mo) ions.
	GO:0016491	oxidoreductase activity	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
biological process
	GO:0055114	oxidation-reduction process	A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.

Chain B,D (AIOB_ALCFA | Q7SIF3)

molecular function
	GO:0051537	2 iron, 2 sulfur cluster binding	Interacting selectively and non-covalently with a 2 iron, 2 sulfur (2Fe-2S) cluster; this cluster consists of two iron atoms, with two inorganic sulfur atoms found between the irons and acting as bridging ligands.
	GO:0050611	arsenate reductase (azurin) activity	Catalysis of the reaction: H(2)O + arsenite + 2 oxidized azurin = 2 H(+) + 2 reduced azurin + arsenate.
	GO:0051536	iron-sulfur cluster binding	Interacting selectively and non-covalently with an iron-sulfur cluster, a combination of iron and sulfur atoms.
	GO:0046872	metal ion binding	Interacting selectively and non-covalently with any metal ion.
	GO:0016491	oxidoreductase activity	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
biological process
	GO:0055114	oxidation-reduction process	A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
cellular component
	GO:0016020	membrane	A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.

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	Cis Peptide Bonds
		Leu A:643 - Pro A:644	[ RasMol ]
		Leu C:643 - Pro C:644	[ RasMol ]
		Tyr B:27 - Pro B:28	[ RasMol ]
		Tyr D:27 - Pro D:28	[ RasMol ]

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Access by PDB/NDB ID
	1g8j
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	AIOA_ALCFA \| Q7SIF4
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	AIOB_ALCFA \| Q7SIF3
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	AIOA_ALCFA \| Q7SIF4
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	AIOB_ALCFA \| Q7SIF3
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UniProtKB/Swiss-Prot
	AIOA_ALCFA \| Q7SIF4	:	1g8k
	AIOB_ALCFA \| Q7SIF3	:	1g8k

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (5, 12)

Sites (12, 12)

SS Bonds (2, 2)

Cis Peptide Bonds (4, 4)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (1, 2)

Exons (0, 0)

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SCOP Domains (3, 6)

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Gene Ontology (9, 14)

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Related Entries

Entries Sharing at Least One Protein Chain (UniProt ID)

Related Entries Specified in the PDB File