1FVL - JenaLib

Title :   THE NUCLEAR MAGNETIC RESONANCE SOLUTION STRUCTURE OF FLAVORIDIN, AN ANTAGONIST OF THE PLATELET GP IIB-IIIA RECEPTOR

Authors :   H. Senn, W. Klaus

Date :   06 Sep 95 (Deposition) - 29 Jan 96 (Release) - 24 Feb 09 (Revision)

Method :   SOLUTION NMR

Resolution :   NOT APPLICABLE

Chains :   NMR Structure  : A  (18x)

Keywords :   Gp Iib/Iiia Antagonist, Blood Coagulation Inhibitor (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   H. Senn, W. Klaus
The Nuclear Magnetic Resonance Solution Structure Of Flavoridin, An Antagonist Of The Platelet Gp Iib-Iiia Receptor.
J. Mol. Biol. V. 232 907 1993
PubMed-ID: 8355277 | Reference-DOI: 10.1006/JMBI.1993.1439
(for further references see the PDB file header)

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (0, 0)

Sites (0, 0)

SS Bonds (6, 6)

Cis Peptide Bonds (0, 0)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (1, 1)

Exons (0, 0)

Sequences/Alignments

NMR Structure

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	UniProt sequence: complete aligned part

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Chain A from PDB  Type:PROTEIN  Length:70
 aligned with VM2FL_PROFL | P18619 from UniProtKB/Swiss-Prot  Length:483

    Alignment length:70
                                   423       433       443       453       463       473       483
          VM2FL_PROFL   414 GEECDCGSPSNPCCDAATCKLRPGAQCADGLCCDQCRFKKKRTICRIARGDFPDDRCTGLSNDCPRWNDL 483
               SCOP domains d1fvla_ A: Flavoridin (triflavin)                                      SCOP domains
               CATH domains 1fvlA00 A:1-70 Echistatin                                              CATH domains
               Pfam domains ---------------------------------------------------------------------- Pfam domains
         Sec.struct. author .............ee....ee......................eee........ee.............. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------DISINTEGRIN_1       ------------------------ PROSITE
                 Transcript ---------------------------------------------------------------------- Transcript
                 1fvl A   1 GEECDCGSPSNPCCDAATCKLRPGAQCADGLCCDQCRFKKKRTICRIARGDFPDDRCTGLSNDCPRWNDL  70
                                    10        20        30        40        50        60        70

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Classification and Annotation

SCOP Domains (1, 1)

CATH Domains (1, 1)

Pfam Domains (0, 0)

Gene Ontology (8, 8)

NMR Structure(hide GO term definitions)

Chain A (VM2FL_PROFL | P18619)

molecular function
	GO:0016787	hydrolase activity	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
	GO:0046872	metal ion binding	Interacting selectively and non-covalently with any metal ion.
	GO:0004222	metalloendopeptidase activity	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions.
	GO:0008237	metallopeptidase activity	Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions.
	GO:0008233	peptidase activity	Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid.
	GO:0008270	zinc ion binding	Interacting selectively and non-covalently with zinc (Zn) ions.
biological process
	GO:0006508	proteolysis	The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
cellular component
	GO:0005576	extracellular region	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.

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