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(-) Description

Title :  CRYSTAL STRUCTURE ANALYSIS OF THE PHOSPHO-SERINE 46 HPR FROM ENTEROCOCCUS FAECALIS
 
Authors :  G. F. Audette, R. Engelmann, W. Hengstenberg, J. Deutscher, K. Hayakawa, J. W. Quail, L. T. J. Delbaere
Date :  13 Sep 00  (Deposition) - 22 Nov 00  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.90
Chains :  Asym. Unit :  A,B
Biol. Unit 1:  A  (1x)
Biol. Unit 2:  B  (1x)
Keywords :  Phospho-Serine Hpr, Pts System, Signaling Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  G. F. Audette, R. Engelmann, W. Hengstenberg, J. Deutscher, K. Hayakawa, J. W. Quail, L. T. Delbaere
The 1. 9 A Resolution Structure Of Phospho-Serine 46 Hpr From Enterococcus Faecalis.
J. Mol. Biol. V. 303 545 2000
PubMed-ID: 11054290  |  Reference-DOI: 10.1006/JMBI.2000.4166
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - PHOSPHOCARRIER PROTEIN HPR
    ChainsA, B
    Organism ScientificENTEROCOCCUS FAECALIS
    Organism Taxid1351
    Strain26487
    SynonymHISTIDINE-CONTAINING PROTEIN, HISTIDINE- CONTAINING PHOSPHOCARRIER PROTEIN, HPR

 Structural Features

(-) Chains, Units

  12
Asymmetric Unit AB
Biological Unit 1 (1x)A 
Biological Unit 2 (1x) B

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 2)

Asymmetric Unit (1, 2)
No.NameCountTypeFull Name
1SEP2Mod. Amino AcidPHOSPHOSERINE
Biological Unit 1 (1, 1)
No.NameCountTypeFull Name
1SEP1Mod. Amino AcidPHOSPHOSERINE
Biological Unit 2 (1, 1)
No.NameCountTypeFull Name
1SEP1Mod. Amino AcidPHOSPHOSERINE

(-) Sites  (0, 0)

(no "Site" information available for 1FU0)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1FU0)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 1FU0)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1FU0)

(-) PROSITE Motifs  (3, 6)

Asymmetric Unit (3, 6)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1PTS_HPR_DOMPS51350 PTS HPR domain profile.PTHP_ENTFA1-88
 
  2A:1-87
B:101-187
2PTS_HPR_HISPS00369 PTS HPR domain histidine phosphorylation site signature.PTHP_ENTFA13-20
 
  2A:13-20
B:113-120
3PTS_HPR_SERPS00589 PTS HPR domain serine phosphorylation site signature.PTHP_ENTFA39-54
 
  2A:39-54
B:139-154
Biological Unit 1 (3, 3)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1PTS_HPR_DOMPS51350 PTS HPR domain profile.PTHP_ENTFA1-88
 
  1A:1-87
-
2PTS_HPR_HISPS00369 PTS HPR domain histidine phosphorylation site signature.PTHP_ENTFA13-20
 
  1A:13-20
-
3PTS_HPR_SERPS00589 PTS HPR domain serine phosphorylation site signature.PTHP_ENTFA39-54
 
  1A:39-54
-
Biological Unit 2 (3, 3)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1PTS_HPR_DOMPS51350 PTS HPR domain profile.PTHP_ENTFA1-88
 
  1-
B:101-187
2PTS_HPR_HISPS00369 PTS HPR domain histidine phosphorylation site signature.PTHP_ENTFA13-20
 
  1-
B:113-120
3PTS_HPR_SERPS00589 PTS HPR domain serine phosphorylation site signature.PTHP_ENTFA39-54
 
  1-
B:139-154

(-) Exons   (0, 0)

(no "Exon" information available for 1FU0)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:87
 aligned with PTHP_ENTFA | P07515 from UniProtKB/Swiss-Prot  Length:88

    Alignment length:87
                                    10        20        30        40        50        60        70        80       
           PTHP_ENTFA     1 MEKKEFHIVAETGIHARPATLLVQTASKFNSDINLEYKGKSVNLKSIMGVMSLGVGQGSDVTITVDGADEAEGMAAIVETLQKEGLA  87
               SCOP domains d1fu0a_ A: Histidine-containing phosphocarrier protein (HPr)                            SCOP domains
               CATH domains 1fu0A00 A:1-87  [code=3.30.1340.10, no name defined]                                    CATH domains
               Pfam domains --------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeee.......hhhhhhhhhhhhhh...eeeeee..eeee...hhhhhhhh.....eeeeeee..hhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) PTS_HPR_DOM  PDB: A:1-87 UniProt: 1-88                                                  PROSITE (1)
                PROSITE (2) ------------PTS_HPR_------------------PTS_HPR_SER     --------------------------------- PROSITE (2)
                 Transcript --------------------------------------------------------------------------------------- Transcript
                 1fu0 A   1 MEKKEFHIVAETGIHARPATLLVQTASKFNSDINLEYKGKSVNLKsIMGVMSLGVGQGSDVTITVDGADEAEGMAAIVETLQKEGLA  87
                                    10        20        30        40     |  50        60        70        80       
                                                                        46-SEP                                     

Chain B from PDB  Type:PROTEIN  Length:87
 aligned with PTHP_ENTFA | P07515 from UniProtKB/Swiss-Prot  Length:88

    Alignment length:87
                                    10        20        30        40        50        60        70        80       
           PTHP_ENTFA     1 MEKKEFHIVAETGIHARPATLLVQTASKFNSDINLEYKGKSVNLKSIMGVMSLGVGQGSDVTITVDGADEAEGMAAIVETLQKEGLA  87
               SCOP domains d1fu0b_ B: Histidine-containing phosphocarrier protein (HPr)                            SCOP domains
               CATH domains 1fu0B00 B:101-187  [code=3.30.1340.10, no name defined]                                 CATH domains
               Pfam domains --------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeee.......hhhhhhhhhhhhhh...eeeeee..eeee...hhhhhhhh.....eeeeeee..hhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) PTS_HPR_DOM  PDB: B:101-187 UniProt: 1-88                                               PROSITE (1)
                PROSITE (2) ------------PTS_HPR_------------------PTS_HPR_SER     --------------------------------- PROSITE (2)
                 Transcript --------------------------------------------------------------------------------------- Transcript
                 1fu0 B 101 MEKKEFHIVAETGIHARPATLLVQTASKFNSDINLEYKGKSVNLKsIMGVMSLGVGQGSDVTITVDGADEAEGMAAIVETLQKEGLA 187
                                   110       120       130       140     | 150       160       170       180       
                                                                       146-SEP                                     

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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 2)

Asymmetric Unit

(-) CATH Domains  (1, 2)

Asymmetric Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 1FU0)

(-) Gene Ontology  (11, 11)

Asymmetric Unit(hide GO term definitions)
Chain A,B   (PTHP_ENTFA | P07515)
molecular function
    GO:0016301    kinase activity    Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule.
    GO:0004674    protein serine/threonine kinase activity    Catalysis of the reactions: ATP + protein serine = ADP + protein serine phosphate, and ATP + protein threonine = ADP + protein threonine phosphate.
    GO:0016740    transferase activity    Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.
biological process
    GO:0008643    carbohydrate transport    The directed movement of carbohydrate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y.
    GO:0009401    phosphoenolpyruvate-dependent sugar phosphotransferase system    The uptake and phosphorylation of specific carbohydrates from the extracellular environment; uptake and phosphorylation are coupled, making the PTS a link between the uptake and metabolism of sugars; phosphoenolpyruvate is the original phosphate donor; phosphoenolpyruvate passes the phosphate via a signal transduction pathway, to enzyme 1 (E1), which in turn passes it on to the histidine protein, HPr; the next step in the system involves sugar-specific membrane-bound complex, enzyme 2 (EII), which transports the sugar into the cell; it includes the sugar permease, which catalyzes the transport reactions; EII is usually divided into three different domains, EIIA, EIIB, and EIIC.
    GO:0016310    phosphorylation    The process of introducing a phosphate group into a molecule, usually with the formation of a phosphoric ester, a phosphoric anhydride or a phosphoric amide.
    GO:0006468    protein phosphorylation    The process of introducing a phosphate group on to a protein.
    GO:0006355    regulation of transcription, DNA-templated    Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
    GO:0006351    transcription, DNA-templated    The cellular synthesis of RNA on a template of DNA.
    GO:0006810    transport    The directed movement of substances (such as macromolecules, small molecules, ions) or cellular components (such as complexes and organelles) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter, pore or motor protein.
cellular component
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        PTHP_ENTFA | P075151ptf 1qfr

(-) Related Entries Specified in the PDB File

1ptf THE NATIVE HPR FROM ENTEROCOCCUS FAECALIS