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(-) Description

Title :  CRYSTAL STRUCTURE OF THE NADP+ DEPENDENT ALDEHYDE DEHYDROGENASE FROM VIBRIO HARVEYI.
 
Authors :  B. Ahvazi, R. Coulombe, M. Delarge, M. Vedadi, L. Zhang, E. Meighen, A. V
Date :  09 May 00  (Deposition) - 24 May 00  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.10
Chains :  Asym. Unit :  A,B,C,D
Biol. Unit 1:  A,D  (1x)
Biol. Unit 2:  B,C  (1x)
Biol. Unit 3:  A (1x),B (1x),C (1x),D (1x)
Keywords :  Nucleotide Binding Domain, Nadp+, Oxidoreductase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  B. Ahvazi, R. Coulombe, M. Delarge, M. Vedadi, L. Zhang, E. Meighen, A. Vrielink
Crystal Structure Of The Nadp+-Dependent Aldehyde Dehydrogenase From Vibrio Harveyi: Structural Implications For Cofactor Specificity And Affinity.
Biochem. J. V. 349 853 2000
PubMed-ID: 10903148
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - ALDEHYDE DEHYDROGENASE
    Chains: A, B, C, D
    EC Number: 1.2.1.5
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Gene: ALDH
    Expression System Plasmid: PT7-3
    Expression System Strain: K38
    Expression System Taxid: 562
    Expression System Vector: PGP1-2
    Expression System Vector Type: PLASMID
    Gene: ALDH
    Organism Scientific: VIBRIO HARVEYI
    Organism Taxid: 669
    Strain: B392
    Synonym: ALDH

 Structural Features

(-) Chains, Units

  1234
Asymmetric Unit : ABCD
Biological Unit 1 (1x): A  D
Biological Unit 2 (1x):  BC 
Biological Unit 3 (1x): A (1x)B (1x)C (1x)D (1x)

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 4)

Asymmetric Unit (1, 4)
No.NameCountTypeFull Name
1NAP4Ligand/IonNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Biological Unit 1 (1, 2)
No.NameCountTypeFull Name
1NAP2Ligand/IonNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Biological Unit 2 (1, 2)
No.NameCountTypeFull Name
1NAP2Ligand/IonNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Biological Unit 3 (1, 2)
No.NameCountTypeFull Name
1NAP2Ligand/IonNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE

(-) Sites  (12, 12)

Asymmetric Unit (12, 12)
No.NameEvidenceResiduesDescription
01AC1SOFTWARESER A:146 , ASN A:147 , LYS A:172 , HIS A:174 , THR A:175 , ARG A:210 , GLN A:214 , PHE A:227 , THR A:228 , GLY A:229 , SER A:230 , GLY A:233 , GLU A:253 , CYS A:289 , GLU A:377 , PHE A:379 , LEU A:405 , HIS A:450 , HOH A:1028 , HOH A:1118BINDING SITE FOR RESIDUE NAP A 650
02AC2SOFTWAREASP A:6 , PHE B:143 , SER B:146 , ASN B:147 , LYS B:172 , HIS B:174 , THR B:175 , ARG B:210 , GLN B:214 , PHE B:227 , THR B:228 , GLY B:229 , SER B:230 , GLY B:233 , LEU B:237 , GLU B:253 , CYS B:289 , GLU B:377 , PHE B:379 , LEU B:405 , HIS B:450 , HOH B:1282 , HOH B:1313BINDING SITE FOR RESIDUE NAP B 750
03AC3SOFTWARESER C:146 , ASN C:147 , LYS C:172 , HIS C:174 , THR C:175 , ARG C:210 , GLN C:214 , PHE C:227 , THR C:228 , GLY C:229 , SER C:230 , GLY C:233 , LEU C:237 , GLU C:253 , CYS C:289 , GLU C:377 , PHE C:379 , LEU C:405 , HIS C:450 , HOH C:1353 , HOH C:1442BINDING SITE FOR RESIDUE NAP C 850
04AC4SOFTWARESER D:146 , ASN D:147 , LYS D:172 , HIS D:174 , THR D:175 , ARG D:210 , GLN D:214 , PHE D:227 , THR D:228 , GLY D:229 , SER D:230 , GLY D:233 , LEU D:237 , GLU D:253 , GLY D:255 , CYS D:289 , GLU D:377 , PHE D:379 , LEU D:405 , HOH D:1517 , HOH D:1607BINDING SITE FOR RESIDUE NAP D 950
05CTAAUTHORGLU A:253 , CYS A:289THE KEY RESIDUES AROUND THE ACTIVE SITE
06CTBAUTHORGLU B:253 , CYS B:289THE KEY RESIDUES AROUND THE ACTIVE SITE
07CTCAUTHORGLU C:253 , CYS C:289THE KEY RESIDUES AROUND THE ACTIVE SITE
08CTDAUTHORGLU D:253 , CYS D:289THE KEY RESIDUES AROUND THE ACTIVE SITE
09NPAAUTHORLYS A:172 , THR A:175 , ARG A:210 , GLU A:377KEY RESIDUES WHICH INTERACT WITH THE NADP+ COFACTOR
10NPBAUTHORLYS B:172 , THR B:175 , ARG B:210 , GLU B:377KEY RESIDUES WHICH INTERACT WITH THE NADP+ COFACTOR
11NPCAUTHORLYS C:172 , THR C:175 , ARG C:210 , GLU C:377KEY RESIDUES WHICH INTERACT WITH THE NADP+ COFACTOR
12NPDAUTHORLYS D:172 , THR D:175 , ARG D:210 , GLU D:377KEY RESIDUES WHICH INTERACT WITH THE NADP+ COFACTOR

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1EZ0)

(-) Cis Peptide Bonds  (12, 12)

Asymmetric Unit
No.Residues
1Ala A:123 -Pro A:124
2Ser A:353 -Pro A:354
3Tyr A:454 -Pro A:455
4Ala B:123 -Pro B:124
5Ser B:353 -Pro B:354
6Tyr B:454 -Pro B:455
7Ala C:123 -Pro C:124
8Ser C:353 -Pro C:354
9Tyr C:454 -Pro C:455
10Ala D:123 -Pro D:124
11Ser D:353 -Pro D:354
12Tyr D:454 -Pro D:455

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1EZ0)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 1EZ0)

(-) Exons   (0, 0)

(no "Exon" information available for 1EZ0)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:504
 aligned with ALDH_VIBHA | Q56694 from UniProtKB/Swiss-Prot  Length:510

    Alignment length:504
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364       374       384       394       404       414       424       434       444       454       464       474       484       494       504    
           ALDH_VIBHA     5 TDNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRTIASELEARSDDIIARAHLETALPEVRLTGEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAHERPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQQSPSTLLTPGIRDSYQSQVVSRGSDDGIDVTFSQAESPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSASTSVGAEAIHRWLRPVAYQALPESLLPDSLKAENPLEIARAVDGKAA 508
               SCOP domains d1ez0a_ A: Aldehyde reductase (dehydrogenase), ALDH                                                                                                                                                                                                                                                                                                                                                                                                                                                                      SCOP domains
               CATH domains 1ez0A01 A:5-254,A:444-507 Aldehyde Dehydrogenase; Chain A, domain 1                                                                                                                                                                                       -1ez0A02 A:256-440 Aldehyde Dehydrogenase; Chain A, domain 2                                                                                                                              ---1ez0A01 A:5-254,A:444-507                                       - CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ........................hhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhh.hhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhh....eeeeee.............eeeeeee...eeee.............hhhhhhhh....eeee.....hhhhhhhhhhhhhhhhh.......eeee.....hhhhhhhh.....eeeee..hhhhhhhhhhh.......eeeee.....eeee..........hhhhhhh..............eeeee..hhhhhhhhhhhhhhh.........hhhhhhhhhhhhhh......eeee..........eeeee.hhhhhhhhhhh......eeeeeee.hhhhhhhhhhhh..eeeeeee.....hhhhhhhhhhh...eeeeee...........eeeee...............hhhhhhheeeeeee..................eeeee..... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 1ez0 A   5 TDNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRTIASELEARSDDIIARAHLETALPEVRLTGEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAHERPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQQSPSTLLTPGIRDSYQSQVVSRGSDDGIDVTFSQAESPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSASTSVGAEAIHRWLRPVAYQALPESLLPDSLKAENPLEIARAVDGKAA 508
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364       374       384       394       404       414       424       434       444       454       464       474       484       494       504    


Chain B from PDB  Type:PROTEIN  Length:502
 aligned with ALDH_VIBHA | Q56694 from UniProtKB/Swiss-Prot  Length:510

    Alignment length:502
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       386       396       406       416       426       436       446       456       466       476       486       496       506  
           ALDH_VIBHA     7 NVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRTIASELEARSDDIIARAHLETALPEVRLTGEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAHERPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQQSPSTLLTPGIRDSYQSQVVSRGSDDGIDVTFSQAESPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSASTSVGAEAIHRWLRPVAYQALPESLLPDSLKAENPLEIARAVDGKAA 508
               SCOP domains d1ez0b_ B: Aldehyde reductase (dehydrogenase), ALDH                                                                                                                                                                                                                                                                                                                                                                                                                                                                    SCOP domains
               CATH domains 1ez0B01 B:7-254,B:444-507 Aldehyde Dehydrogenase; Chain A, domain 1                                                                                                                                                                                     -1ez0B02 B:256-440 Aldehyde Dehydrogenase; Chain A, domain 2                                                                                                                              ---1ez0B01 B:7-254,B:444-507                                       - CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......................hhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhh.hhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhh....eeeeee.............eeeeeee...eeee.............hhhhhhhh....eeee.....hhhhhhhhhhhhhhhhh.......eeee.....hhhhhhhh.....eeeee..hhhhhhhhhhh.......eeeee.....eeee..........hhhhhhh..............eeeee..hhhhhhhhhhhhhhh.........hhhhhhhhhhhhhh......eeee..........eeeee.hhhhhhhhhhh......eeeeeee.hhhhhhhhhhhh..eeeeeee.....hhhhhhhhhhh...eeeeee...........eeeee...............hhhhhhheeeeeee..................eeeee..... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1ez0 B   7 NVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRTIASELEARSDDIIARAHLETALPEVRLTGEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAHERPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQQSPSTLLTPGIRDSYQSQVVSRGSDDGIDVTFSQAESPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSASTSVGAEAIHRWLRPVAYQALPESLLPDSLKAENPLEIARAVDGKAA 508
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       386       396       406       416       426       436       446       456       466       476       486       496       506  


Chain C from PDB  Type:PROTEIN  Length:502
 aligned with ALDH_VIBHA | Q56694 from UniProtKB/Swiss-Prot  Length:510

    Alignment length:502
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       386       396       406       416       426       436       446       456       466       476       486       496       506  
           ALDH_VIBHA     7 NVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRTIASELEARSDDIIARAHLETALPEVRLTGEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAHERPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQQSPSTLLTPGIRDSYQSQVVSRGSDDGIDVTFSQAESPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSASTSVGAEAIHRWLRPVAYQALPESLLPDSLKAENPLEIARAVDGKAA 508
               SCOP domains d1ez0c_ C: Aldehyde reductase (dehydrogenase), ALDH                                                                                                                                                                                                                                                                                                                                                                                                                                                                    SCOP domains
               CATH domains 1ez0C01 C:7-254,C:444-507 Aldehyde Dehydrogenase; Chain A, domain 1                                                                                                                                                                                     -1ez0C02 C:256-440 Aldehyde Dehydrogenase; Chain A, domain 2                                                                                                                              ---1ez0C01 C:7-254,C:444-507                                       - CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......................hhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhh.hhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhh....eeeeee.............eeeeeee...eeee.............hhhhhhhh....eeee.....hhhhhhhhhhhhhhhhh.......eeee.....hhhhhhhh.....eeeee..hhhhhhhhhhh.......eeeee.....eeee..........hhhhhhh..............eeeee..hhhhhhhhhhhhhhh.........hhhhhhhhhhhhhh......eeee..........eeeee.hhhhhhhhhhh......eeeeeee.hhhhhhhhhhhh..eeeeeee.....hhhhhhhhhhh...eeeeee...........eeeee...............hhhhhhheeeeeee..................eeeee..... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1ez0 C   7 NVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRTIASELEARSDDIIARAHLETALPEVRLTGEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAHERPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQQSPSTLLTPGIRDSYQSQVVSRGSDDGIDVTFSQAESPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSASTSVGAEAIHRWLRPVAYQALPESLLPDSLKAENPLEIARAVDGKAA 508
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       386       396       406       416       426       436       446       456       466       476       486       496       506  


Chain D from PDB  Type:PROTEIN  Length:502
 aligned with ALDH_VIBHA | Q56694 from UniProtKB/Swiss-Prot  Length:510

    Alignment length:502
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       386       396       406       416       426       436       446       456       466       476       486       496       506  
           ALDH_VIBHA     7 NVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRTIASELEARSDDIIARAHLETALPEVRLTGEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAHERPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQQSPSTLLTPGIRDSYQSQVVSRGSDDGIDVTFSQAESPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSASTSVGAEAIHRWLRPVAYQALPESLLPDSLKAENPLEIARAVDGKAA 508
               SCOP domains d1ez0d_ D: Aldehyde reductase (dehydrogenase), ALDH                                                                                                                                                                                                                                                                                                                                                                                                                                                                    SCOP domains
               CATH domains 1ez0D01 D:7-254,D:444-507 Aldehyde Dehydrogenase; Chain A, domain 1                                                                                                                                                                                     -1ez0D02 D:256-440 Aldehyde Dehydrogenase; Chain A, domain 2                                                                                                                              ---1ez0D01 D:7-254,D:444-507                                       - CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......................hhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhh.hhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhh....eeeeee.............eeeeeee...eeee.............hhhhhhhh....eeee.....hhhhhhhhhhhhhhhhh.......eeee.....hhhhhhhh.....eeeee..hhhhhhhhhhh.......eeeee.....eeee..........hhhhhhh..............eeeee..hhhhhhhhhhhhhhh.........hhhhhhhhhhhhhh......eeee..........eeeee.hhhhhhhhhhh......eeeeeee.hhhhhhhhhhhh..eeeeeee.....hhhhhhhhhhh...eeeeee...........eeeee...............hhhhhhheeeeeee..................eeeee..... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1ez0 D   7 NVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRTIASELEARSDDIIARAHLETALPEVRLTGEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAHERPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQQSPSTLLTPGIRDSYQSQVVSRGSDDGIDVTFSQAESPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSASTSVGAEAIHRWLRPVAYQALPESLLPDSLKAENPLEIARAVDGKAA 508
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       386       396       406       416       426       436       446       456       466       476       486       496       506
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 4)

Asymmetric Unit
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (2, 8)

Asymmetric Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 1EZ0)

(-) Gene Ontology  (5, 5)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D   (ALDH_VIBHA | Q56694)
molecular function
    GO:0033721    aldehyde dehydrogenase (NADP+) activity    Catalysis of the reaction: an aldehyde + NADP+ + H2O = an acid + NADPH + H+.
    GO:0016491    oxidoreductase activity    Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
    GO:0016620    oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor    Catalysis of an oxidation-reduction (redox) reaction in which an aldehyde or ketone (oxo) group acts as a hydrogen or electron donor and reduces NAD or NADP.
biological process
    GO:0008152    metabolic process    The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
    GO:0055114    oxidation-reduction process    A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.

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 Related Entries

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        ALDH_VIBHA | Q56694: 1eyy

(-) Related Entries Specified in the PDB File

1eyy ALDEHYDE DEHYDROGENASE FROM VIBRIO HARVEYI 2.5A