Chain A from PDB Type:PROTEIN Length:160
aligned with COAT_PHMV | P36351 from UniProtKB/Swiss-Prot Length:188
Alignment length:160
38 48 58 68 78 88 98 108 118 128 138 148 158 168 178 188
COAT_PHMV 29 SPAIVLPFQFEATTFGTAETAAQVSLQTADPITKLTAPYRHAQIVECKAILTPTDLAVSNPLTVYLAWVPANSPATPTQILRVYGGQSFVLGGAISAAKTIEVPLNLDSVNRMLKDSVTYTDTPKLLAYSRAPTNPSKIPTASIQISGRIRLSKPMLIAN 188
SCOP domains d1e57a_ A: Tymovirus coat protein SCOP domains
CATH domains 1e57A00 A:29-188 [code=2.60.120.20, no name defined] CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ......eeee..........eeeee...hhhhhhhhh.........eee.............eeeeeeee...............eeeee.................................eeeeee................eeee........... Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1e57 A 29 SPAIVLPFQFEATTFGTAETAAQVSLQTADPITKLTAPYRHAQIVECKAILTPTDLAVSNPLTVYLAWVPANSPATPTQILRVYGGQSFVLGGAISAAKTIEVPLNLDSVNRMLKDSVTYTDTPKLLAYSRAPTNPSKIPTASIQISGRIRLSKPMLIAN 188
38 48 58 68 78 88 98 108 118 128 138 148 158 168 178 188
Chain B from PDB Type:PROTEIN Length:183
aligned with COAT_PHMV | P36351 from UniProtKB/Swiss-Prot Length:188
Alignment length:183
15 25 35 45 55 65 75 85 95 105 115 125 135 145 155 165 175 185
COAT_PHMV 6 VVKVKQASIPAPGSILSQPNTEQSPAIVLPFQFEATTFGTAETAAQVSLQTADPITKLTAPYRHAQIVECKAILTPTDLAVSNPLTVYLAWVPANSPATPTQILRVYGGQSFVLGGAISAAKTIEVPLNLDSVNRMLKDSVTYTDTPKLLAYSRAPTNPSKIPTASIQISGRIRLSKPMLIAN 188
SCOP domains d1e57b_ B: Tymovirus coat protein SCOP domains
CATH domains 1e57B00 B:6-188 [code=2.60.120.20, no name defined] CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .........................eeeeeeee..................hhhhhhhhh...eeeeeee....................eee.....hhhhh.........................hhhhh.............eee...................eeeeeeee....... Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1e57 B 6 VVKVKQASIPAPGSILSQPNTEQSPAIVLPFQFEATTFGTAETAAQVSLQTADPITKLTAPYRHAQIVECKAILTPTDLAVSNPLTVYLAWVPANSPATPTQILRVYGGQSFVLGGAISAAKTIEVPLNLDSVNRMLKDSVTYTDTPKLLAYSRAPTNPSKIPTASIQISGRIRLSKPMLIAN 188
15 25 35 45 55 65 75 85 95 105 115 125 135 145 155 165 175 185
Chain C from PDB Type:PROTEIN Length:179
aligned with COAT_PHMV | P36351 from UniProtKB/Swiss-Prot Length:188
Alignment length:179
19 29 39 49 59 69 79 89 99 109 119 129 139 149 159 169 179
COAT_PHMV 10 KQASIPAPGSILSQPNTEQSPAIVLPFQFEATTFGTAETAAQVSLQTADPITKLTAPYRHAQIVECKAILTPTDLAVSNPLTVYLAWVPANSPATPTQILRVYGGQSFVLGGAISAAKTIEVPLNLDSVNRMLKDSVTYTDTPKLLAYSRAPTNPSKIPTASIQISGRIRLSKPMLIAN 188
SCOP domains d1e57c_ C: Tymovirus coat protein SCOP domains
CATH domains 1e57C00 C:10-188 [code=2.60.120.20, no name defined] CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ........................eeeee.........eeeeee...hhhhhh......eeee...eeee..........eeeeeeeee.....hhhhh......eeeee.........eeee...................eeeeeee...............eeeeeeee....... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1e57 C 10 KQASIPAPGSILSQPNTEQSPAIVLPFQFEATTFGTAETAAQVSLQTADPITKLTAPYRHAQIVECKAILTPTDLAVSNPLTVYLAWVPANSPATPTQILRVYGGQSFVLGGAISAAKTIEVPLNLDSVNRMLKDSVTYTDTPKLLAYSRAPTNPSKIPTASIQISGRIRLSKPMLIAN 188
19 29 39 49 59 69 79 89 99 109 119 129 139 149 159 169 179
Legend: |
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→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |