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(-) Description

Title :  SOLUTION STRUCTURE OF LINUM USITATISSINUM TRYPSIN INHIBITOR (LUTI)
 
Authors :  T. Cierpicki, J. Otlewski
Date :  08 Dec 99  (Deposition) - 17 Dec 99  (Release) - 24 Feb 09  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (20x)
Keywords :  Serine Proteinase Inhibitor, Trypsin Inhibitor (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  T. Cierpicki, J. Otlewski
Determination Of A High Precision Structure Of A Novel Protein, Linum Usitatissimum Trypsin Inhibitor (Luti), Using Computer-Aided Assignment Of Noesy Cross-Peaks
J. Mol. Biol. V. 302 1179 2000
PubMed-ID: 11183783  |  Reference-DOI: 10.1006/JMBI.2000.4116

(-) Compounds

Molecule 1 - LINUM USITATISSINUM TRYPSIN INHIBITOR
    ChainsA
    OrganSEED
    Organism CommonFLAX
    Organism ScientificLINUM USITATISSIMUM
    Organism Taxid4006
    SynonymLUTI

 Structural Features

(-) Chains, Units

  
NMR Structure (20x)

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

NMR Structure (1, 1)
No.NameCountTypeFull Name
1ACE1Mod. Amino AcidACETYL GROUP

(-) Sites  (0, 0)

(no "Site" information available for 1DWM)

(-) SS Bonds  (1, 1)

NMR Structure
No.Residues
1A:4 -A:49

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 1DWM)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1DWM)

(-) PROSITE Motifs  (1, 1)

NMR Structure (1, 1)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1POTATO_INHIBITORPS00285 Potato inhibitor I family signature.ICI_LINUS10-21  1A:10-21

(-) Exons   (0, 0)

(no "Exon" information available for 1DWM)

(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:70
 aligned with ICI_LINUS | P82381 from UniProtKB/Swiss-Prot  Length:69

    Alignment length:70
                             1                                                                    
                             |       9        19        29        39        49        59        69
             ICI_LINUS    - -SRRCPGKNAWPELVGKSGNMAAATVERENRNVHAIVLKEGSAMTKDFRCDRVWVIVNDHGVVTSVPHIT 69
               SCOP domains d1dwma_ A: Trypsin inhibitor LUTI                                      SCOP domains
               CATH domains -1dwmA00 A:1-69 Trypsin Inhibitor V, subunit A                         CATH domains
               Pfam domains ---------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..........hhhh....hhhhhhhhhhh....eeeeee............eeeeee............. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------POTATO_INHIB------------------------------------------------ PROSITE
                 Transcript ---------------------------------------------------------------------- Transcript
                  1dwm A  0 xSRRCPGKNAWPELVGKSGNMAAATVERENRNVHAIVLKEGSAMTKDFRCDRVWVIVNDHGVVTSVPHIT 69
                            |        9        19        29        39        49        59        69
                            |                                                                     
                            0-ACE                                                                 

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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 1)

NMR Structure

(-) CATH Domains  (1, 1)

NMR Structure
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 1DWM)

(-) Gene Ontology  (5, 5)

NMR Structure(hide GO term definitions)
Chain A   (ICI_LINUS | P82381)
molecular function
    GO:0030414    peptidase inhibitor activity    Stops, prevents or reduces the activity of a peptidase, any enzyme that catalyzes the hydrolysis peptide bonds.
    GO:0004867    serine-type endopeptidase inhibitor activity    Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme.
biological process
    GO:0010951    negative regulation of endopeptidase activity    Any process that decreases the frequency, rate or extent of endopeptidase activity, the endohydrolysis of peptide bonds within proteins.
    GO:0010466    negative regulation of peptidase activity    Any process that stops or reduces the rate of peptidase activity, the hydrolysis of peptide bonds within proteins.
    GO:0009611    response to wounding    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to the organism.

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