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(-) Description

Title :  ANNEXIN XII E105K HOMOHEXAMER CRYSTAL STRUCTURE
 
Authors :  J. P. Cartailler, H. T. Haigler, H. Luecke
Date :  13 Dec 99  (Deposition) - 20 Mar 00  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.93
Chains :  Asym./Biol. Unit :  A,B,C,D,E,F
Keywords :  Homohexamer, Novel Ph-Dependent Hexamerization Switch E76, Low Calcium Form, Mixed Typeii/Typeiii Calcium Binding Site, E105K Epsilon Amino Group Replaces Intermolecular Calcium, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  J. P. Cartailler, H. T. Haigler, H. Luecke
Annexin Xii E105K Crystal Structure: Identification Of A Ph-Dependent Switch For Mutant Hexamerization.
Biochemistry V. 39 2475 2000
PubMed-ID: 10704197  |  Reference-DOI: 10.1021/BI992278D
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - ANNEXIN XII E105K MUTANT HOMOHEXAMER
    Chains: A, B, C, D, E, F
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Expression System Vector: PSE420
    Expression System Vector Type: PLASMID
    Mutation: YES
    Organism Scientific: HYDRA VULGARIS
    Organism Taxid: 6087

 Structural Features

(-) Chains, Units

  123456
Asymmetric/Biological Unit : ABCDEF

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 11)

Asymmetric/Biological Unit (1, 11)
No.NameCountTypeFull Name
1CA11Ligand/IonCALCIUM ION

(-) Sites  (11, 11)

Asymmetric Unit (11, 11)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREMET A:98 , GLY A:102 , THR A:103 , GLU A:142 , LYS E:68BINDING SITE FOR RESIDUE CA A 1121
02AC2SOFTWAREMET B:98 , GLY B:100 , GLY B:102 , GLU B:142BINDING SITE FOR RESIDUE CA B 1122
03AC3SOFTWAREMET C:98 , LYS C:99 , GLY C:100 , GLY C:102 , HOH C:1240 , HOH C:1255BINDING SITE FOR RESIDUE CA C 1123
04AC4SOFTWAREMET D:98 , LYS D:99 , GLY D:100 , GLY D:102BINDING SITE FOR RESIDUE CA D 1124
05AC5SOFTWAREMET E:98 , LYS E:99 , GLY E:100 , HOH E:1213BINDING SITE FOR RESIDUE CA E 1125
06AC6SOFTWAREMET F:98 , GLY F:100 , LEU F:101 , GLY F:102 , HOH F:1260BINDING SITE FOR RESIDUE CA F 1126
07AC7SOFTWAREGLY A:181 , GLN A:184 , ILE A:185 , GLY A:186 , THR A:187 , GLU A:226 , HOH A:1255BINDING SITE FOR RESIDUE CA A 1131
08AC8SOFTWAREGLY B:181 , GLN B:184 , ILE B:185 , GLY B:186 , GLU B:226BINDING SITE FOR RESIDUE CA B 1132
09AC9SOFTWAREGLY C:181 , GLN C:184 , ILE C:185 , GLY C:186 , GLU C:226BINDING SITE FOR RESIDUE CA C 1133
10BC1SOFTWAREGLY D:181 , GLN D:184 , ILE D:185 , GLY D:186 , GLU D:226 , HOH D:1258BINDING SITE FOR RESIDUE CA D 1134
11BC2SOFTWAREGLY E:181 , GLN E:184 , ILE E:185 , GLY E:186 , GLU E:226BINDING SITE FOR RESIDUE CA E 1135

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1DM5)

(-) Cis Peptide Bonds  (1, 1)

Asymmetric/Biological Unit
No.Residues
1Leu B:260 -Gly B:261

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1DM5)

(-) PROSITE Motifs  (1, 18)

Asymmetric/Biological Unit (1, 18)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1ANNEXINPS00223 Annexins repeated domain signature.ANX12_HYDVU30-82
 
 
 
 
 
186-238
 
 
 
 
 
261-313
 
 
 
 
 		  18A:30-82
B:30-82
C:30-82
D:30-82
E:30-82
F:30-82
A:186-238
B:186-238
C:186-238
D:186-238
E:186-238
F:186-238
A:261-313
B:261-313
C:261-313
D:261-313
E:261-313
F:261-313

(-) Exons   (0, 0)

(no "Exon" information available for 1DM5)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:315
 aligned with ANX12_HYDVU | P26256 from UniProtKB/Swiss-Prot  Length:316

    Alignment length:315
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311     
          ANX12_HYDVU     2 VVQGTVKPHASFNSREDAETLRKAMKGIGTDEKSITHILATRSNAQRQQIKTDYTTLFGKHLEDELKSELSGNYEAAALALLRKPDEFLAEQLHAAMKGLGTDENALIDILCTQSNAQIHAIKAAFKLLYKEDLEKEIISETSGNFQRLLVSMLQGGRKEDEPVNAAHAAEDAAAIYQAGEGQIGTDESRFNAVLATRSYPQLHQIFHEYSKISNKTILQAIENEFSGDIKNGLLAIVKSVENRFAYFAERLHHAMKGLGTSDKTLIRILVSRSEIDLANIKETFQAMYGKSLYEFIADDCSGDYKDLLLQITGH 316
               SCOP domains d1dm5a_ A: Annexin XII                                                                                                                                                                                                                                                                                                      SCOP domains
               CATH domains ----------1dm5A01 A:12-84  [code=1.10.220.10, no name defined]                     1dm5A02 A:85-158  [code=1.10.220.10, no name defined]                     1dm5A03 A:159-244  [code=1.10.220.10, no name defined]                                1dm5A04 A:245-316  [code=1.10.220.10, no name defined]                   CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ............hhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhh..hhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhh..hhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------ANNEXIN  PDB: A:30-82 UniProt: 30-82                 -------------------------------------------------------------------------------------------------------ANNEXIN  PDB: A:186-238 UniProt: 186-238             ----------------------ANNEXIN  PDB: A:261-313 UniProt: 261-313             --- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1dm5 A   2 VVQGTVKPHASFNSREDAETLRKAMKGIGTDEKSITHILATRSNAQRQQIKTDYTTLFGKHLEDELKSELSGNYEAAALALLRKPDEFLAEQLHAAMKGLGTDKNALIDILCTQSNAQIHAIKAAFKLLYKEDLEKEIISETSGNFQRLLVSMLQGGRKEDEPVNAAHAAEDAAAIYQAGEGQIGTDESRFNAVLATRSYPQLHQIFHEYSKISNKTILQAIENEFSGDIKNGLLAIVKSVENRFAYFAERLHHAMKGLGTSDKTLIRILVSRSEIDLANIKETFQAMYGKSLYEFIADDCSGDYKDLLLQITGH 316
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311     


Chain B from PDB  Type:PROTEIN  Length:315
 aligned with ANX12_HYDVU | P26256 from UniProtKB/Swiss-Prot  Length:316

    Alignment length:315
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311     
          ANX12_HYDVU     2 VVQGTVKPHASFNSREDAETLRKAMKGIGTDEKSITHILATRSNAQRQQIKTDYTTLFGKHLEDELKSELSGNYEAAALALLRKPDEFLAEQLHAAMKGLGTDENALIDILCTQSNAQIHAIKAAFKLLYKEDLEKEIISETSGNFQRLLVSMLQGGRKEDEPVNAAHAAEDAAAIYQAGEGQIGTDESRFNAVLATRSYPQLHQIFHEYSKISNKTILQAIENEFSGDIKNGLLAIVKSVENRFAYFAERLHHAMKGLGTSDKTLIRILVSRSEIDLANIKETFQAMYGKSLYEFIADDCSGDYKDLLLQITGH 316
               SCOP domains d1dm5b_ B: Annexin XII                                                                                                                                                                                                                                                                                                      SCOP domains
               CATH domains ----------1dm5B01 B:12-84  [code=1.10.220.10, no name defined]                     1dm5B02 B:85-158  [code=1.10.220.10, no name defined]                     1dm5B03 B:159-244  [code=1.10.220.10, no name defined]                                1dm5B04 B:245-316  [code=1.10.220.10, no name defined]                   CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ............hhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhh..hhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhh........hhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhh..hhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------ANNEXIN  PDB: B:30-82 UniProt: 30-82                 -------------------------------------------------------------------------------------------------------ANNEXIN  PDB: B:186-238 UniProt: 186-238             ----------------------ANNEXIN  PDB: B:261-313 UniProt: 261-313             --- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1dm5 B   2 VVQGTVKPHASFNSREDAETLRKAMKGIGTDEKSITHILATRSNAQRQQIKTDYTTLFGKHLEDELKSELSGNYEAAALALLRKPDEFLAEQLHAAMKGLGTDKNALIDILCTQSNAQIHAIKAAFKLLYKEDLEKEIISETSGNFQRLLVSMLQGGRKEDEPVNAAHAAEDAAAIYQAGEGQIGTDESRFNAVLATRSYPQLHQIFHEYSKISNKTILQAIENEFSGDIKNGLLAIVKSVENRFAYFAERLHHAMKGLGTSDKTLIRILVSRSEIDLANIKETFQAMYGKSLYEFIADDCSGDYKDLLLQITGH 316
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311     


Chain C from PDB  Type:PROTEIN  Length:315
 aligned with ANX12_HYDVU | P26256 from UniProtKB/Swiss-Prot  Length:316

    Alignment length:315
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311     
          ANX12_HYDVU     2 VVQGTVKPHASFNSREDAETLRKAMKGIGTDEKSITHILATRSNAQRQQIKTDYTTLFGKHLEDELKSELSGNYEAAALALLRKPDEFLAEQLHAAMKGLGTDENALIDILCTQSNAQIHAIKAAFKLLYKEDLEKEIISETSGNFQRLLVSMLQGGRKEDEPVNAAHAAEDAAAIYQAGEGQIGTDESRFNAVLATRSYPQLHQIFHEYSKISNKTILQAIENEFSGDIKNGLLAIVKSVENRFAYFAERLHHAMKGLGTSDKTLIRILVSRSEIDLANIKETFQAMYGKSLYEFIADDCSGDYKDLLLQITGH 316
               SCOP domains d1dm5c_ C: Annexin XII                                                                                                                                                                                                                                                                                                      SCOP domains
               CATH domains ----------1dm5C01 C:12-84  [code=1.10.220.10, no name defined]                     1dm5C02 C:85-158  [code=1.10.220.10, no name defined]                     1dm5C03 C:159-244  [code=1.10.220.10, no name defined]                                1dm5C04 C:245-316  [code=1.10.220.10, no name defined]                   CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ............hhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhh..hhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhh..hhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------ANNEXIN  PDB: C:30-82 UniProt: 30-82                 -------------------------------------------------------------------------------------------------------ANNEXIN  PDB: C:186-238 UniProt: 186-238             ----------------------ANNEXIN  PDB: C:261-313 UniProt: 261-313             --- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1dm5 C   2 VVQGTVKPHASFNSREDAETLRKAMKGIGTDEKSITHILATRSNAQRQQIKTDYTTLFGKHLEDELKSELSGNYEAAALALLRKPDEFLAEQLHAAMKGLGTDKNALIDILCTQSNAQIHAIKAAFKLLYKEDLEKEIISETSGNFQRLLVSMLQGGRKEDEPVNAAHAAEDAAAIYQAGEGQIGTDESRFNAVLATRSYPQLHQIFHEYSKISNKTILQAIENEFSGDIKNGLLAIVKSVENRFAYFAERLHHAMKGLGTSDKTLIRILVSRSEIDLANIKETFQAMYGKSLYEFIADDCSGDYKDLLLQITGH 316
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311     


Chain D from PDB  Type:PROTEIN  Length:315
 aligned with ANX12_HYDVU | P26256 from UniProtKB/Swiss-Prot  Length:316

    Alignment length:315
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311     
          ANX12_HYDVU     2 VVQGTVKPHASFNSREDAETLRKAMKGIGTDEKSITHILATRSNAQRQQIKTDYTTLFGKHLEDELKSELSGNYEAAALALLRKPDEFLAEQLHAAMKGLGTDENALIDILCTQSNAQIHAIKAAFKLLYKEDLEKEIISETSGNFQRLLVSMLQGGRKEDEPVNAAHAAEDAAAIYQAGEGQIGTDESRFNAVLATRSYPQLHQIFHEYSKISNKTILQAIENEFSGDIKNGLLAIVKSVENRFAYFAERLHHAMKGLGTSDKTLIRILVSRSEIDLANIKETFQAMYGKSLYEFIADDCSGDYKDLLLQITGH 316
               SCOP domains d1dm5d_ D: Annexin XII                                                                                                                                                                                                                                                                                                      SCOP domains
               CATH domains ----------1dm5D01 D:12-84  [code=1.10.220.10, no name defined]                     1dm5D02 D:85-158  [code=1.10.220.10, no name defined]                     1dm5D03 D:159-244  [code=1.10.220.10, no name defined]                                1dm5D04 D:245-316  [code=1.10.220.10, no name defined]                   CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ............hhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhh..hhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhh..........hhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhh...hhhhhhhhhhhhhh.hhhhhhhh..hhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------ANNEXIN  PDB: D:30-82 UniProt: 30-82                 -------------------------------------------------------------------------------------------------------ANNEXIN  PDB: D:186-238 UniProt: 186-238             ----------------------ANNEXIN  PDB: D:261-313 UniProt: 261-313             --- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1dm5 D   2 VVQGTVKPHASFNSREDAETLRKAMKGIGTDEKSITHILATRSNAQRQQIKTDYTTLFGKHLEDELKSELSGNYEAAALALLRKPDEFLAEQLHAAMKGLGTDKNALIDILCTQSNAQIHAIKAAFKLLYKEDLEKEIISETSGNFQRLLVSMLQGGRKEDEPVNAAHAAEDAAAIYQAGEGQIGTDESRFNAVLATRSYPQLHQIFHEYSKISNKTILQAIENEFSGDIKNGLLAIVKSVENRFAYFAERLHHAMKGLGTSDKTLIRILVSRSEIDLANIKETFQAMYGKSLYEFIADDCSGDYKDLLLQITGH 316
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311     


Chain E from PDB  Type:PROTEIN  Length:315
 aligned with ANX12_HYDVU | P26256 from UniProtKB/Swiss-Prot  Length:316

    Alignment length:315
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311     
          ANX12_HYDVU     2 VVQGTVKPHASFNSREDAETLRKAMKGIGTDEKSITHILATRSNAQRQQIKTDYTTLFGKHLEDELKSELSGNYEAAALALLRKPDEFLAEQLHAAMKGLGTDENALIDILCTQSNAQIHAIKAAFKLLYKEDLEKEIISETSGNFQRLLVSMLQGGRKEDEPVNAAHAAEDAAAIYQAGEGQIGTDESRFNAVLATRSYPQLHQIFHEYSKISNKTILQAIENEFSGDIKNGLLAIVKSVENRFAYFAERLHHAMKGLGTSDKTLIRILVSRSEIDLANIKETFQAMYGKSLYEFIADDCSGDYKDLLLQITGH 316
               SCOP domains d1dm5e_ E: Annexin XII                                                                                                                                                                                                                                                                                                      SCOP domains
               CATH domains ----------1dm5E01 E:12-84  [code=1.10.220.10, no name defined]                     1dm5E02 E:85-158  [code=1.10.220.10, no name defined]                     1dm5E03 E:159-244  [code=1.10.220.10, no name defined]                                1dm5E04 E:245-316  [code=1.10.220.10, no name defined]                   CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ............hhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhh..hhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhh........hhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhh..hhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------ANNEXIN  PDB: E:30-82 UniProt: 30-82                 -------------------------------------------------------------------------------------------------------ANNEXIN  PDB: E:186-238 UniProt: 186-238             ----------------------ANNEXIN  PDB: E:261-313 UniProt: 261-313             --- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1dm5 E   2 VVQGTVKPHASFNSREDAETLRKAMKGIGTDEKSITHILATRSNAQRQQIKTDYTTLFGKHLEDELKSELSGNYEAAALALLRKPDEFLAEQLHAAMKGLGTDKNALIDILCTQSNAQIHAIKAAFKLLYKEDLEKEIISETSGNFQRLLVSMLQGGRKEDEPVNAAHAAEDAAAIYQAGEGQIGTDESRFNAVLATRSYPQLHQIFHEYSKISNKTILQAIENEFSGDIKNGLLAIVKSVENRFAYFAERLHHAMKGLGTSDKTLIRILVSRSEIDLANIKETFQAMYGKSLYEFIADDCSGDYKDLLLQITGH 316
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311     


Chain F from PDB  Type:PROTEIN  Length:315
 aligned with ANX12_HYDVU | P26256 from UniProtKB/Swiss-Prot  Length:316

    Alignment length:315
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311     
          ANX12_HYDVU     2 VVQGTVKPHASFNSREDAETLRKAMKGIGTDEKSITHILATRSNAQRQQIKTDYTTLFGKHLEDELKSELSGNYEAAALALLRKPDEFLAEQLHAAMKGLGTDENALIDILCTQSNAQIHAIKAAFKLLYKEDLEKEIISETSGNFQRLLVSMLQGGRKEDEPVNAAHAAEDAAAIYQAGEGQIGTDESRFNAVLATRSYPQLHQIFHEYSKISNKTILQAIENEFSGDIKNGLLAIVKSVENRFAYFAERLHHAMKGLGTSDKTLIRILVSRSEIDLANIKETFQAMYGKSLYEFIADDCSGDYKDLLLQITGH 316
               SCOP domains d1dm5f_ F: Annexin XII                                                                                                                                                                                                                                                                                                      SCOP domains
               CATH domains ----------1dm5F01 F:12-84  [code=1.10.220.10, no name defined]                     1dm5F02 F:85-158  [code=1.10.220.10, no name defined]                     1dm5F03 F:159-244  [code=1.10.220.10, no name defined]                                1dm5F04 F:245-316  [code=1.10.220.10, no name defined]                   CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ............hhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhh..hhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhh..........hhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhh..hhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------ANNEXIN  PDB: F:30-82 UniProt: 30-82                 -------------------------------------------------------------------------------------------------------ANNEXIN  PDB: F:186-238 UniProt: 186-238             ----------------------ANNEXIN  PDB: F:261-313 UniProt: 261-313             --- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1dm5 F   2 VVQGTVKPHASFNSREDAETLRKAMKGIGTDEKSITHILATRSNAQRQQIKTDYTTLFGKHLEDELKSELSGNYEAAALALLRKPDEFLAEQLHAAMKGLGTDKNALIDILCTQSNAQIHAIKAAFKLLYKEDLEKEIISETSGNFQRLLVSMLQGGRKEDEPVNAAHAAEDAAAIYQAGEGQIGTDESRFNAVLATRSYPQLHQIFHEYSKISNKTILQAIENEFSGDIKNGLLAIVKSVENRFAYFAERLHHAMKGLGTSDKTLIRILVSRSEIDLANIKETFQAMYGKSLYEFIADDCSGDYKDLLLQITGH 316
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 6)

Asymmetric/Biological Unit
(-)
Class: All alpha proteins (14657)

(-) CATH Domains  (1, 24)

Asymmetric/Biological Unit
(-)
Class: Mainly Alpha (13335)
(-)
Architecture: Orthogonal Bundle (10391)
(-)
Topology: Annexin V; domain 1 (80)
(-)
Homologous Superfamily: [code=1.10.220.10, no name defined] (58)
(-)
Hydra vulgaris. Organism_taxid: 6087. (1)
1a1dm5A01A:12-84
1b1dm5B01B:12-84
1c1dm5E04E:245-316
1d1dm5F04F:245-316
1e1dm5A02A:85-158
1f1dm5B02B:85-158
1g1dm5C02C:85-158
1h1dm5D02D:85-158
1i1dm5E02E:85-158
1j1dm5F02F:85-158
1k1dm5A03A:159-244
1l1dm5B03B:159-244
1m1dm5C01C:12-84
1n1dm5C03C:159-244
1o1dm5D03D:159-244
1p1dm5E03E:159-244
1q1dm5F03F:159-244
1r1dm5D01D:12-84
1s1dm5E01E:12-84
1t1dm5F01F:12-84
1u1dm5A04A:245-316
1v1dm5B04B:245-316
1w1dm5C04C:245-316
1x1dm5D04D:245-316

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 1DM5)

(-) Gene Ontology  (2, 2)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A,B,C,D,E,F   (ANX12_HYDVU | P26256)
molecular function
    GO:0005509    calcium ion binding    Interacting selectively and non-covalently with calcium ions (Ca2+).
    GO:0005544    calcium-dependent phospholipid binding    Interacting selectively and non-covalently with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester, in the presence of calcium.

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  1dm5
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  ANX12_HYDVU | P26256
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        ANX12_HYDVU | P26256: 1aei

(-) Related Entries Specified in the PDB File

1aei WILD TYPE ANNEXIN XII HEXAMER CRYSTAL STRUCTURE