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(-) Description

Title :  CRYSTAL STRUCTURE OF 5-F-9-AMINO-(N-(2-DIMETHYLAMINO)ETHYL) ACRIDINE-4-CARBOXAMIDE BOUND TO D(CGTACG)2
 
Authors :  A. Adams, J. M. Guss, C. A. Collyer, W. A. Denny, L. P. Wakelin
Date :  08 Dec 99  (Deposition) - 30 Oct 00  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.55
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (2x)
Keywords :  Intercalation, Dna, Acridine (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  A. Adams, J. M. Guss, C. A. Collyer, W. A. Denny, A. S. Prakash, L. P. Wakelin
Acridinecarboxamide Topoisomerase Poisons: Structural And Kinetic Studies Of The Dna Complexes Of 5-Substituted 9-Amino-(N-(2-Dimethylamino)Ethyl)Acridine-4- Carboxamides.
Mol. Pharmacol. V. 58 649 2000
PubMed-ID: 10953060
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - DNA (5'-D(*CP*GP*TP*AP*CP*G)-3')
    ChainsA
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 Structural Features

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  1
Asymmetric Unit A
Biological Unit 1 (2x)A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 2)

Asymmetric Unit (1, 2)
No.NameCountTypeFull Name
1DA72Ligand/Ion5-FLUORO-9-AMINO-(N-(2-DIMETHYLAMINO)ETHYL)ACRIDINE-4-CARBOXAMIDE
Biological Unit 1 (1, 4)
No.NameCountTypeFull Name
1DA74Ligand/Ion5-FLUORO-9-AMINO-(N-(2-DIMETHYLAMINO)ETHYL)ACRIDINE-4-CARBOXAMIDE

(-) Sites  (2, 2)

Asymmetric Unit (2, 2)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREDC A:1001 , DG A:1002 , DA A:1004 , DC A:1005 , DG A:1006 , DA7 A:3015 , HOH A:4007 , HOH A:4014BINDING SITE FOR RESIDUE DA7 A 3014
2AC2SOFTWAREDC A:1001 , DC A:1005 , DG A:1006 , DA7 A:3014 , HOH A:4018BINDING SITE FOR RESIDUE DA7 A 3015

(-) SS Bonds  (0, 0)

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Chain A from PDB  Type:DNA  Length:6
                                       
                1dl8 A 1001 CGTACG 1006

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