1COM - JenaLib

Asymmetric Unit (Jmol Viewer)

Asym. Unit - sites (Jmol Viewer)

Biological Unit 1 (Jmol Viewer)

Biol. Unit 1 - sites (Jmol Viewer)

Biological Unit 2 (Jmol Viewer)

Biological Unit 3 (Jmol Viewer)

Biological Unit 4 (Jmol Viewer)

Title :   THE MONOFUNCTIONAL CHORISMATE MUTASE FROM BACILLUS SUBTILIS: STRUCTURE DETERMINATION OF CHORISMATE MUTASE AND ITS COMPLEXES WITH A TRANSITION STATE ANALOG AND PREPHENATE, AND IMPLICATIONS ON THE MECHANISM OF ENZYMATIC REACTION

Authors :   Y. M. Chook, H. Ke, W. N. Lipscomb

Date :   08 Apr 94 (Deposition) - 22 Jun 94 (Release) - 24 Feb 09 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.20

Chains :   Asym. Unit : A,B,C,D,E,F,G,H,I,J,K,L
Biol. Unit 1: A,B,C  (1x)
Biol. Unit 2: J,K,L  (1x)
Biol. Unit 3: D,E,F  (1x)
Biol. Unit 4: G,H,I  (1x)

Keywords :   Chorismate Mutase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   Y. M. Chook, J. V. Gray, H. Ke, W. N. Lipscomb
The Monofunctional Chorismate Mutase From Bacillus Subtilis. Structure Determination Of Chorismate Mutase And Its Complexes With A Transition State Analog And Prephenate, And Implications For The Mechanism Of The Enzymatic Reaction.
J. Mol. Biol. V. 240 476 1994
PubMed-ID: 8046752 | Reference-DOI: 10.1006/JMBI.1994.1462
(for further references see the PDB file header)

Molecule 1 - CHORISMATE MUTASE
	Chains	:	A, B, C, D, E, F, G, H, I, J, K, L
	EC Number	:	5.4.99.5
	Engineered	:	YES
	Organism Scientific	:	BACILLUS SUBTILIS
	Organism Taxid	:	1423

		1	2	3	4	5	6	7	8	9	10	11	12
Asymmetric Unit	:	A	B	C	D	E	F	G	H	I	J	K	L
Biological Unit 1 (1x)	:	A	B	C
Biological Unit 2 (1x)	:										J	K	L
Biological Unit 3 (1x)	:				D	E	F
Biological Unit 4 (1x)	:							G	H	I

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (1, 9)

No.	Name	Count	Type	Full Name
1	PRE	9	Ligand/Ion	PREPHENIC ACID

Biological Unit 1 (1, 3)

No.	Name	Count	Type	Full Name
1	PRE	3	Ligand/Ion	PREPHENIC ACID

Biological Unit 2 (1, 1)

No.	Name	Count	Type	Full Name
1	PRE	1	Ligand/Ion	PREPHENIC ACID

Biological Unit 3 (1, 3)

No.	Name	Count	Type	Full Name
1	PRE	3	Ligand/Ion	PREPHENIC ACID

Biological Unit 4 (1, 2)

No.	Name	Count	Type	Full Name
1	PRE	2	Ligand/Ion	PREPHENIC ACID

Asymmetric Unit (21, 21)

No.	Name	Evidence	Residues	Description
01	AAB	AUTHOR	PHE A:57 , PRO A:58 , ALA A:59 , LYS A:60 , THR A:74 , CYS A:75 , ARG B:7 , GLU B:78 , ARG B:90 , TYR B:108 , LEU B:115 , ARG B:116	SHARED ACTIVE SITE IN A/B CHAINS
02	ABC	AUTHOR	PHE B:57 , PRO B:58 , ALA B:59 , LYS B:60 , THR B:74 , CYS B:75 , ARG C:7 , GLU C:78 , ARG C:90 , TYR C:108 , LEU C:115 , ARG C:116	SHARED ACTIVE SITE IN B/C CHAINS
03	AC1	SOFTWARE	PHE A:57 , ALA A:59 , LYS A:60 , VAL A:73 , THR A:74 , CYS A:75 , ARG B:7 , GLU B:78 , ARG B:90 , TYR B:108 , LEU B:115 , ARG B:116 , HOH B:424	BINDING SITE FOR RESIDUE PRE B 221
04	AC2	SOFTWARE	PHE B:57 , ALA B:59 , LYS B:60 , VAL B:73 , THR B:74 , CYS B:75 , ARG C:7 , GLU C:78 , ARG C:90 , TYR C:108 , LEU C:115 , ARG C:116 , HOH C:441 , HOH C:761	BINDING SITE FOR RESIDUE PRE C 222
05	AC3	SOFTWARE	ARG A:7 , GLU A:78 , ARG A:90 , PHE C:57 , ALA C:59 , VAL C:73 , THR C:74 , CYS C:75	BINDING SITE FOR RESIDUE PRE A 223
06	AC4	SOFTWARE	PHE D:57 , ALA D:59 , ARG D:63 , VAL D:73 , THR D:74 , CYS D:75 , ARG E:7 , GLU E:78 , ARG E:90 , TYR E:108 , LEU E:115 , ARG E:116	BINDING SITE FOR RESIDUE PRE E 224
07	AC5	SOFTWARE	PHE E:57 , ALA E:59 , LYS E:60 , THR E:74 , CYS E:75 , ARG F:7 , GLU F:78 , ARG F:90 , TYR F:108 , LEU F:115 , ARG F:116	BINDING SITE FOR RESIDUE PRE F 225
08	AC6	SOFTWARE	ARG D:7 , GLU D:78 , ARG D:90 , PHE F:57 , ALA F:59 , VAL F:73 , THR F:74 , CYS F:75	BINDING SITE FOR RESIDUE PRE D 226
09	AC7	SOFTWARE	PHE G:57 , ALA G:59 , ARG G:63 , VAL G:73 , THR G:74 , CYS G:75 , ARG H:7 , GLU H:78 , ARG H:90 , TYR H:108 , LEU H:115	BINDING SITE FOR RESIDUE PRE H 227
10	AC8	SOFTWARE	ARG G:7 , GLU G:78 , ARG G:90 , TYR G:108 , LEU G:115 , PHE I:57 , ALA I:59 , LYS I:60 , ARG I:63 , VAL I:73 , THR I:74 , CYS I:75	BINDING SITE FOR RESIDUE PRE G 229
11	AC9	SOFTWARE	PHE J:57 , ALA J:59 , VAL J:73 , THR J:74 , CYS J:75 , ARG K:7 , GLU K:78 , ARG K:90 , TYR K:108 , LEU K:115 , ARG K:116	BINDING SITE FOR RESIDUE PRE K 230
12	ACA	AUTHOR	PHE C:57 , PRO C:58 , ALA C:59 , LYS C:60 , THR C:74 , CYS C:75 , ARG A:7 , GLU A:78 , ARG A:90 , TYR A:108 , LEU A:115	SHARED ACTIVE SITE IN C/A CHAINS
13	ADE	AUTHOR	PHE D:57 , PRO D:58 , ALA D:59 , LYS D:60 , THR D:74 , CYS D:75 , ARG E:7 , GLU E:78 , ARG E:90 , TYR E:108 , LEU E:115 , ARG E:116	SHARED ACTIVE SITE IN D/E CHAINS
14	AEF	AUTHOR	PHE E:57 , PRO E:58 , ALA E:59 , LYS E:60 , THR E:74 , CYS E:75 , ARG F:7 , GLU F:78 , ARG F:90 , TYR F:108 , LEU F:115 , ARG F:116	SHARED ACTIVE SITE IN E/F CHAINS
15	AFD	AUTHOR	PHE F:57 , PRO F:58 , ALA F:59 , LYS F:60 , THR F:74 , CYS F:75 , ARG D:7 , GLU D:78 , ARG D:90 , TYR D:108 , LEU D:115	SHARED ACTIVE SITE IN F/D CHAINS
16	AGH	AUTHOR	PHE G:57 , PRO G:58 , ALA G:59 , LYS G:60 , THR G:74 , CYS G:75 , ARG H:7 , GLU H:78 , ARG H:90 , TYR H:108 , LEU H:115	SHARED ACTIVE SITE IN G/H CHAINS
17	AHI	AUTHOR	PHE H:57 , PRO H:58 , ALA H:59 , LYS H:60 , THR H:74 , CYS H:75 , ARG I:7 , GLU I:78 , ARG I:90 , TYR I:108 , LEU I:115	SHARED ACTIVE SITE IN H/I CHAINS
18	AIG	AUTHOR	PHE I:57 , PRO I:58 , ALA I:59 , LYS I:60 , THR I:74 , CYS I:75 , ARG G:7 , GLU G:78 , ARG G:90 , TYR G:108 , LEU G:115	SHARED ACTIVE SITE IN I/G CHAINS
19	AJK	AUTHOR	PHE J:57 , PRO J:58 , ALA J:59 , LYS J:60 , THR J:74 , CYS J:75 , ARG K:7 , GLU K:78 , ARG K:90 , TYR K:108 , LEU K:115 , ARG K:116	SHARED ACTIVE SITE IN J/K CHAINS
20	AKL	AUTHOR	PHE K:57 , PRO K:58 , ALA K:59 , LYS K:60 , THR K:74 , CYS K:75 , ARG L:7 , GLU L:78 , ARG L:90 , TYR L:108 , LEU L:115	SHARED ACTIVE SITE IN K/L CHAINS
21	ALJ	AUTHOR	PHE L:57 , PRO L:58 , ALA L:59 , LYS L:60 , THR L:74 , CYS L:75 , ARG J:7 , GLU J:78 , ARG J:90 , TYR J:108 , LEU J:115	SHARED ACTIVE SITE IN L/J CHAINS

(no "SS Bond" information available for 1COM)

(no "Cis Peptide Bond" information available for 1COM)

(no "SAP(SNP)/Variant" information available for 1COM)

Asymmetric Unit (1, 12)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	CHORISMATE_MUT_1	PS51167	Chorismate mutase domain profile.	AROH_BACSU	3-121	12	A:3-115 B:3-119 C:3-120 D:3-115 E:3-119 F:3-118 G:3-115 H:3-115 I:3-115 J:3-115 K:3-117 L:3-115

Biological Unit 1 (1, 3)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	CHORISMATE_MUT_1	PS51167	Chorismate mutase domain profile.	AROH_BACSU	3-121	3	A:3-115 B:3-119 C:3-120 - - - - - - - - -

Biological Unit 2 (1, 3)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	CHORISMATE_MUT_1	PS51167	Chorismate mutase domain profile.	AROH_BACSU	3-121	3	- - - - - - - - - J:3-115 K:3-117 L:3-115

Biological Unit 3 (1, 3)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	CHORISMATE_MUT_1	PS51167	Chorismate mutase domain profile.	AROH_BACSU	3-121	3	- - - D:3-115 E:3-119 F:3-118 - - - - - -

Biological Unit 4 (1, 3)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	CHORISMATE_MUT_1	PS51167	Chorismate mutase domain profile.	AROH_BACSU	3-121	3	- - - - - - G:3-115 H:3-115 I:3-115 - - -

(no "Exon" information available for 1COM)

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:114
 aligned with AROH_BACSU | P19080 from UniProtKB/Swiss-Prot  Length:127

    Alignment length:114
                                    11        21        31        41        51        61        71        81        91       101       111    
           AROH_BACSU     2 MIRGIRGATTVERDTEEEILQKTKQLLEKIIEENHTKPEDVVQMLLSATPDLHAVFPAKAVRELSGWQYVPVTCMQEMDVTGGLKKCIRVMMTVQTDVPQDQIRHVYLEKVVVL 115
               SCOP domains d1coma_ A: Chorismate mutase                                                                                       SCOP domains
               CATH domains 1comA00 A:2-115  [code=3.30.1330.40, no name defined]                                                              CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author eeeeeeeeee.....hhhhhhhhhhhhhhhhhhh........eeeeeee........hhhhhhh.......eeee...........eeeeeee............eee.hhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE -CHORISMATE_MUT_1  PDB: A:3-115 UniProt: 3-121                                                                     PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------ Transcript
                 1com A   2 MIRGIRGATTVERDTEEEILQKTKQLLEKIIEENHTKPEDVVQMLLSATPDLHAVFPAKAVRELSGWQYVPVTCMQEMDVTGGLKKCIRVMMTVQTDVPQDQIRHVYLEKAVVL 115
                                    11        21        31        41        51        61        71        81        91       101       111

Chain B from PDB  Type:PROTEIN  Length:118
 aligned with AROH_BACSU | P19080 from UniProtKB/Swiss-Prot  Length:127

    Alignment length:118
                                    11        21        31        41        51        61        71        81        91       101       111        
           AROH_BACSU     2 MIRGIRGATTVERDTEEEILQKTKQLLEKIIEENHTKPEDVVQMLLSATPDLHAVFPAKAVRELSGWQYVPVTCMQEMDVTGGLKKCIRVMMTVQTDVPQDQIRHVYLEKVVVLRPDL 119
               SCOP domains d1comb_ B: Chorismate mutase                                                                                           SCOP domains
               CATH domains 1comB00 B:2-119  [code=3.30.1330.40, no name defined]                                                                  CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author eeeeeeeeee.....hhhhhhhhhhhhhhhhhhh........eeeeeee........hhhhhhh.......eeee...........eeeeeee............eee.hhhhh.... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -CHORISMATE_MUT_1  PDB: B:3-119 UniProt: 3-121                                                                         PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------- Transcript
                 1com B   2 MIRGIRGATTVERDTEEEILQKTKQLLEKIIEENHTKPEDVVQMLLSATPDLHAVFPAKAVRELSGWQYVPVTCMQEMDVTGGLKKCIRVMMTVQTDVPQDQIRHVYLEKAVVLRPDL 119
                                    11        21        31        41        51        61        71        81        91       101       111

Chain C from PDB  Type:PROTEIN  Length:119
 aligned with AROH_BACSU | P19080 from UniProtKB/Swiss-Prot  Length:127

    Alignment length:119
                                    11        21        31        41        51        61        71        81        91       101       111         
           AROH_BACSU     2 MIRGIRGATTVERDTEEEILQKTKQLLEKIIEENHTKPEDVVQMLLSATPDLHAVFPAKAVRELSGWQYVPVTCMQEMDVTGGLKKCIRVMMTVQTDVPQDQIRHVYLEKVVVLRPDLS 120
               SCOP domains d1comc_ C: Chorismate mutase                                                                                            SCOP domains
               CATH domains 1comC00 C:2-120  [code=3.30.1330.40, no name defined]                                                                   CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author eeeeeeeeee.....hhhhhhhhhhhhhhhhhhh........eeeeeee........hhhhhhh.......eeee...........eeeeeee............eee.hhhhh..... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -CHORISMATE_MUT_1  PDB: C:3-120 UniProt: 3-121                                                                          PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------- Transcript
                 1com C   2 MIRGIRGATTVERDTEEEILQKTKQLLEKIIEENHTKPEDVVQMLLSATPDLHAVFPAKAVRELSGWQYVPVTCMQEMDVTGGLKKCIRVMMTVQTDVPQDQIRHVYLEKAVVLRPDLS 120
                                    11        21        31        41        51        61        71        81        91       101       111

Chain D from PDB  Type:PROTEIN  Length:114
 aligned with AROH_BACSU | P19080 from UniProtKB/Swiss-Prot  Length:127

    Alignment length:114
                                    11        21        31        41        51        61        71        81        91       101       111    
           AROH_BACSU     2 MIRGIRGATTVERDTEEEILQKTKQLLEKIIEENHTKPEDVVQMLLSATPDLHAVFPAKAVRELSGWQYVPVTCMQEMDVTGGLKKCIRVMMTVQTDVPQDQIRHVYLEKVVVL 115
               SCOP domains d1comd_ D: Chorismate mutase                                                                                       SCOP domains
               CATH domains 1comD00 D:2-115  [code=3.30.1330.40, no name defined]                                                              CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author eeeeeeeeee.....hhhhhhhhhhhhhhhhhhh........eeeeeee........hhhhhhh.......eeee...........eeeeeee............eee.hhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE -CHORISMATE_MUT_1  PDB: D:3-115 UniProt: 3-121                                                                     PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------ Transcript
                 1com D   2 MIRGIRGATTVERDTEEEILQKTKQLLEKIIEENHTKPEDVVQMLLSATPDLHAVFPAKAVRELSGWQYVPVTCMQEMDVTGGLKKCIRVMMTVQTDVPQDQIRHVYLEKAVVL 115
                                    11        21        31        41        51        61        71        81        91       101       111

Chain E from PDB  Type:PROTEIN  Length:118
 aligned with AROH_BACSU | P19080 from UniProtKB/Swiss-Prot  Length:127

    Alignment length:118
                                    11        21        31        41        51        61        71        81        91       101       111        
           AROH_BACSU     2 MIRGIRGATTVERDTEEEILQKTKQLLEKIIEENHTKPEDVVQMLLSATPDLHAVFPAKAVRELSGWQYVPVTCMQEMDVTGGLKKCIRVMMTVQTDVPQDQIRHVYLEKVVVLRPDL 119
               SCOP domains d1come_ E: Chorismate mutase                                                                                           SCOP domains
               CATH domains 1comE00 E:2-119  [code=3.30.1330.40, no name defined]                                                                  CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author eeeeeeeeee.....hhhhhhhhhhhhhhhhhhh........eeeeeee........hhhhhhh.......eeee...........eeeeeee............eee.hhhhh.... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -CHORISMATE_MUT_1  PDB: E:3-119 UniProt: 3-121                                                                         PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------- Transcript
                 1com E   2 MIRGIRGATTVERDTEEEILQKTKQLLEKIIEENHTKPEDVVQMLLSATPDLHAVFPAKAVRELSGWQYVPVTCMQEMDVTGGLKKCIRVMMTVQTDVPQDQIRHVYLEKAVVLRPDL 119
                                    11        21        31        41        51        61        71        81        91       101       111

Chain F from PDB  Type:PROTEIN  Length:117
 aligned with AROH_BACSU | P19080 from UniProtKB/Swiss-Prot  Length:127

    Alignment length:117
                                    11        21        31        41        51        61        71        81        91       101       111       
           AROH_BACSU     2 MIRGIRGATTVERDTEEEILQKTKQLLEKIIEENHTKPEDVVQMLLSATPDLHAVFPAKAVRELSGWQYVPVTCMQEMDVTGGLKKCIRVMMTVQTDVPQDQIRHVYLEKVVVLRPD 118
               SCOP domains d1comf_ F: Chorismate mutase                                                                                          SCOP domains
               CATH domains 1comF00 F:2-118  [code=3.30.1330.40, no name defined]                                                                 CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author eeeeeeeeee.....hhhhhhhhhhhhhhhhhhh........eeeeeee........hhhhhhh.......eeee...........eeeeeee............eee.hhhhh... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -CHORISMATE_MUT_1  PDB: F:3-118 UniProt: 3-121                                                                        PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------- Transcript
                 1com F   2 MIRGIRGATTVERDTEEEILQKTKQLLEKIIEENHTKPEDVVQMLLSATPDLHAVFPAKAVRELSGWQYVPVTCMQEMDVTGGLKKCIRVMMTVQTDVPQDQIRHVYLEKAVVLRPD 118
                                    11        21        31        41        51        61        71        81        91       101       111

Chain G from PDB  Type:PROTEIN  Length:114
 aligned with AROH_BACSU | P19080 from UniProtKB/Swiss-Prot  Length:127

    Alignment length:114
                                    11        21        31        41        51        61        71        81        91       101       111    
           AROH_BACSU     2 MIRGIRGATTVERDTEEEILQKTKQLLEKIIEENHTKPEDVVQMLLSATPDLHAVFPAKAVRELSGWQYVPVTCMQEMDVTGGLKKCIRVMMTVQTDVPQDQIRHVYLEKVVVL 115
               SCOP domains d1comg_ G: Chorismate mutase                                                                                       SCOP domains
               CATH domains 1comG00 G:2-115  [code=3.30.1330.40, no name defined]                                                              CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author eeeeeeeeee.....hhhhhhhhhhhhhhhhhhh........eeeeeee........hhhhhhh.......eeee...........eeeeeee............eee.hhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE -CHORISMATE_MUT_1  PDB: G:3-115 UniProt: 3-121                                                                     PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------ Transcript
                 1com G   2 MIRGIRGATTVERDTEEEILQKTKQLLEKIIEENHTKPEDVVQMLLSATPDLHAVFPAKAVRELSGWQYVPVTCMQEMDVTGGLKKCIRVMMTVQTDVPQDQIRHVYLEKAVVL 115
                                    11        21        31        41        51        61        71        81        91       101       111

Chain H from PDB  Type:PROTEIN  Length:114
 aligned with AROH_BACSU | P19080 from UniProtKB/Swiss-Prot  Length:127

    Alignment length:114
                                    11        21        31        41        51        61        71        81        91       101       111    
           AROH_BACSU     2 MIRGIRGATTVERDTEEEILQKTKQLLEKIIEENHTKPEDVVQMLLSATPDLHAVFPAKAVRELSGWQYVPVTCMQEMDVTGGLKKCIRVMMTVQTDVPQDQIRHVYLEKVVVL 115
               SCOP domains d1comh_ H: Chorismate mutase                                                                                       SCOP domains
               CATH domains 1comH00 H:2-115  [code=3.30.1330.40, no name defined]                                                              CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author eeeeeeeeee.....hhhhhhhhhhhhhhhhhhh........eeeeeee........hhhhhhh.......eeee...........eeeeeee............eee.hhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE -CHORISMATE_MUT_1  PDB: H:3-115 UniProt: 3-121                                                                     PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------ Transcript
                 1com H   2 MIRGIRGATTVERDTEEEILQKTKQLLEKIIEENHTKPEDVVQMLLSATPDLHAVFPAKAVRELSGWQYVPVTCMQEMDVTGGLKKCIRVMMTVQTDVPQDQIRHVYLEKAVVL 115
                                    11        21        31        41        51        61        71        81        91       101       111

Chain I from PDB  Type:PROTEIN  Length:114
 aligned with AROH_BACSU | P19080 from UniProtKB/Swiss-Prot  Length:127

    Alignment length:114
                                    11        21        31        41        51        61        71        81        91       101       111    
           AROH_BACSU     2 MIRGIRGATTVERDTEEEILQKTKQLLEKIIEENHTKPEDVVQMLLSATPDLHAVFPAKAVRELSGWQYVPVTCMQEMDVTGGLKKCIRVMMTVQTDVPQDQIRHVYLEKVVVL 115
               SCOP domains d1comi_ I: Chorismate mutase                                                                                       SCOP domains
               CATH domains 1comI00 I:2-115  [code=3.30.1330.40, no name defined]                                                              CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author eeeeeeeeee.....hhhhhhhhhhhhhhhhhhh........eeeeeee........hhhhhhh.......eeee...........eeeeeee............eee.hhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE -CHORISMATE_MUT_1  PDB: I:3-115 UniProt: 3-121                                                                     PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------ Transcript
                 1com I   2 MIRGIRGATTVERDTEEEILQKTKQLLEKIIEENHTKPEDVVQMLLSATPDLHAVFPAKAVRELSGWQYVPVTCMQEMDVTGGLKKCIRVMMTVQTDVPQDQIRHVYLEKAVVL 115
                                    11        21        31        41        51        61        71        81        91       101       111

Chain J from PDB  Type:PROTEIN  Length:114
 aligned with AROH_BACSU | P19080 from UniProtKB/Swiss-Prot  Length:127

    Alignment length:114
                                    11        21        31        41        51        61        71        81        91       101       111    
           AROH_BACSU     2 MIRGIRGATTVERDTEEEILQKTKQLLEKIIEENHTKPEDVVQMLLSATPDLHAVFPAKAVRELSGWQYVPVTCMQEMDVTGGLKKCIRVMMTVQTDVPQDQIRHVYLEKVVVL 115
               SCOP domains d1comj_ J: Chorismate mutase                                                                                       SCOP domains
               CATH domains 1comJ00 J:2-115  [code=3.30.1330.40, no name defined]                                                              CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author eeeeeeeeee.....hhhhhhhhhhhhhhhhhhh........eeeeeee........hhhhhhh.......eeee...........eeeeeee............eee.hhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE -CHORISMATE_MUT_1  PDB: J:3-115 UniProt: 3-121                                                                     PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------ Transcript
                 1com J   2 MIRGIRGATTVERDTEEEILQKTKQLLEKIIEENHTKPEDVVQMLLSATPDLHAVFPAKAVRELSGWQYVPVTCMQEMDVTGGLKKCIRVMMTVQTDVPQDQIRHVYLEKAVVL 115
                                    11        21        31        41        51        61        71        81        91       101       111

Chain K from PDB  Type:PROTEIN  Length:116
 aligned with AROH_BACSU | P19080 from UniProtKB/Swiss-Prot  Length:127

    Alignment length:116
                                    11        21        31        41        51        61        71        81        91       101       111      
           AROH_BACSU     2 MIRGIRGATTVERDTEEEILQKTKQLLEKIIEENHTKPEDVVQMLLSATPDLHAVFPAKAVRELSGWQYVPVTCMQEMDVTGGLKKCIRVMMTVQTDVPQDQIRHVYLEKVVVLRP 117
               SCOP domains d1comk_ K: Chorismate mutase                                                                                         SCOP domains
               CATH domains 1comK00 K:2-117  [code=3.30.1330.40, no name defined]                                                                CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author eeeeeeeeee.....hhhhhhhhhhhhhhhhhhh........eeeeeee........hhhhhhh.......eeee...........eeeeeee............eee.hhhhh.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -CHORISMATE_MUT_1  PDB: K:3-117 UniProt: 3-121                                                                       PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------- Transcript
                 1com K   2 MIRGIRGATTVERDTEEEILQKTKQLLEKIIEENHTKPEDVVQMLLSATPDLHAVFPAKAVRELSGWQYVPVTCMQEMDVTGGLKKCIRVMMTVQTDVPQDQIRHVYLEKAVVLRP 117
                                    11        21        31        41        51        61        71        81        91       101       111

Chain L from PDB  Type:PROTEIN  Length:114
 aligned with AROH_BACSU | P19080 from UniProtKB/Swiss-Prot  Length:127

    Alignment length:114
                                    11        21        31        41        51        61        71        81        91       101       111    
           AROH_BACSU     2 MIRGIRGATTVERDTEEEILQKTKQLLEKIIEENHTKPEDVVQMLLSATPDLHAVFPAKAVRELSGWQYVPVTCMQEMDVTGGLKKCIRVMMTVQTDVPQDQIRHVYLEKVVVL 115
               SCOP domains d1coml_ L: Chorismate mutase                                                                                       SCOP domains
               CATH domains 1comL00 L:2-115  [code=3.30.1330.40, no name defined]                                                              CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author eeeeeeeeee.....hhhhhhhhhhhhhhhhhhh........eeeeeee........hhhhhhh.......eeee...........eeeeeee............eee.hhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE -CHORISMATE_MUT_1  PDB: L:3-115 UniProt: 3-121                                                                     PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------ Transcript
                 1com L   2 MIRGIRGATTVERDTEEEILQKTKQLLEKIIEENHTKPEDVVQMLLSATPDLHAVFPAKAVRELSGWQYVPVTCMQEMDVTGGLKKCIRVMMTVQTDVPQDQIRHVYLEKAVVL 115
                                    11        21        31        41        51        61        71        81        91       101       111

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric Unit

Classes(

)

Folds(

)

Superfamilies( (-)

)

Families(

)

Protein Domains( (-)

)

Organisms( (-)

)

Class: Alpha and beta proteins (a+b) (23004)

Fold: Bacillus chorismate mutase-like (324)

Superfamily: YjgF-like (45)

Family: Chorismate mutase (10)

Protein domain: Chorismate mutase (10)

Bacillus subtilis [TaxId: 1423] (6)

1a	d1coma_	A:
1b	d1comb_	B:
1c	d1comc_	C:
1d	d1comd_	D:
1e	d1come_	E:
1f	d1comf_	F:
1g	d1comg_	G:
1h	d1comh_	H:
1i	d1comi_	I:
1j	d1comj_	J:
1k	d1comk_	K:
1l	d1coml_	L:

Asymmetric Unit

Classes(

)

Architectures( (-)

)

Topologies( (-)

)

Homologous Superfamilies( (-)

)

Organisms( (-)

)

Class: Alpha Beta (26913)

Architecture: 2-Layer Sandwich (8480)

Topology: 60s Ribosomal Protein L30; Chain: A; (235)

Homologous Superfamily: [code=3.30.1330.40, no name defined] (35)

Bacillus subtilis. Organism_taxid: 1423 (3)

1a	1comC00	C:2-120
1b	1comB00	B:2-119
1c	1comE00	E:2-119
1d	1comF00	F:2-118
1e	1comK00	K:2-117
1f	1comA00	A:2-115
1g	1comD00	D:2-115
1h	1comG00	G:2-115
1i	1comH00	H:2-115
1j	1comI00	I:2-115
1k	1comJ00	J:2-115
1l	1comL00	L:2-115

(no "Pfam Domain" information available for 1COM)

Asymmetric Unit(hide GO term definitions)

Chain A,B,C,D,E,F,G,H,I,J,K,L (AROH_BACSU | P19080)

molecular function
	GO:0004106	chorismate mutase activity	Catalysis of the reaction: chorismate = prephenate.
	GO:0016853	isomerase activity	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5.
biological process
	GO:0009073	aromatic amino acid family biosynthetic process	The chemical reactions and pathways resulting in the formation of aromatic amino acid family, amino acids with aromatic ring (phenylalanine, tyrosine, tryptophan).
	GO:0008652	cellular amino acid biosynthetic process	The chemical reactions and pathways resulting in the formation of amino acids, organic acids containing one or more amino substituents.
	GO:0046417	chorismate metabolic process	The chemical reactions and pathways involving chorismate, the anion of (3R-trans)-3-((1-carboxyethenyl)oxy)-4-hydroxy-1,5-cyclohexadiene-1-carboxylic acid.
cellular component
	GO:0005737	cytoplasm	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

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	Cis Peptide Bonds
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	AROH_BACSU \| P19080	:	1dbf 1fnj 1fnk 2chs 2cht 3zo8 3zop 3zp4 3zp7

(no "Related Entries Specified in the PDB File" available for 1COM)

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (1, 9)

Sites (21, 21)

SS Bonds (0, 0)

Cis Peptide Bonds (0, 0)

Sequence-Structure Mapping

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PROSITE Motifs (1, 12)

Exons (0, 0)

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