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(-) Description

Title :  BLEOMYCIN RESISTANCE PROTEIN FROM STREPTOALLOTEICHUS HINDUSTANUS
 
Authors :  P. Dumas, M. Bergdoll, C. Cagnon, J. M. Masson
Date :  17 Oct 98  (Deposition) - 21 Oct 99  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.30
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (2x)
Keywords :  Antibiotic Resistance, Bleomycin, Drug Sequestering, Chain Swapping, Antibiotic (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  P. Dumas, M. Bergdoll, C. Cagnon, J. M. Masson
Crystal Structure And Site-Directed Mutagenesis Of A Bleomycin Resistance Protein And Their Significance For Dru Sequestering.
Embo J. V. 13 2483 1994
PubMed-ID: 7516875
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - PROTEIN (BLEOMYCIN RESISTANCE PROTEIN)
    Atcc: 31158
    Cellular Location: CYTOPLASMIC
    Chains: A
    Collection: 31158
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Cellular Location: PERIPLASM
    Expression System Gene: SH BLE
    Expression System Plasmid: PIN-III-OMPA2
    Expression System Strain: SG936
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: SH BLE
    Organism Scientific: STREPTOALLOTEICHUS HINDUSTANUS
    Organism Taxid: 2017
    Other Details: DROCOURT, D., CALMELS, T., REYNES, J.P., BARON, M. & TIRABY, G. (1990) NUCLEIC ACIDS RES., 18, 4009.
    Synonym: SH-BLE

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit : A
Biological Unit 1 (2x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 1BYL)

(-) Sites  (2, 2)

Asymmetric Unit (2, 2)
No.NameEvidenceResiduesDescription
1B2PAUTHORASP A:44B2P : BETA II' TURN
2PSWAUTHORPRO A:9PROLINE-SWITCH : THIS IS THE PROLINE SUPPOSED TO PROMOTE THE CHAIN EXCHANGE BETWEEN EACH MONOMERS. SEE BERGDOLL ET AL., STRUCTURE 15 MARCH 1997, 5:391-401.

(-) SS Bonds  (0, 0)

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(-) Cis Peptide Bonds  (0, 0)

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 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

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(-) PROSITE Motifs  (1, 1)

Asymmetric Unit (1, 1)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1VOCPS51819 Vicinal oxygen chelate (VOC) domain profile.BLE_STRHI3-121  1A:3-121
Biological Unit 1 (1, 2)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1VOCPS51819 Vicinal oxygen chelate (VOC) domain profile.BLE_STRHI3-121  2A:3-121

(-) Exons   (0, 0)

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(-) Sequences/Alignments

Asymmetric Unit
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:122
 aligned with BLE_STRHI | P17493 from UniProtKB/Swiss-Prot  Length:124

    Alignment length:122
                             1                                                                                                                        
                             |       9        19        29        39        49        59        69        79        89        99       109       119  
            BLE_STRHI     - -MAKLTSAVPVLTARDVAGAVEFWTDRLGFSRDFVEDDFAGVVRDDVTLFISAVQDQVVPDNTLAWVWVRGLDELYAEWSEVVSTNFRDASGPAMTEIGEQPWGREFALRDPAGNCVHFVAE 121
               SCOP domains d1byla_ A: Bleomycin resistance protein, BRP                                                                               SCOP domains
               CATH domains 1bylA00 A:0-121 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1                                                            CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .........eeeee..hhhhhhhhhh....eeeee...eeeeee..eeeeeee...hhhhhh.eeeeee..hhhhhhhhh..................eee..eeeeeee.....eeeeee. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---VOC  PDB: A:3-121 UniProt: 3-121                                                                                        PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------- Transcript
                 1byl A   0 FMAKLTSAVPVLTARDVAGAVEFWTDRLGFSRDFVEDDFAGVVRDDVTLFISAVQDQVVPDNTLAWVWVRGLDELYAEWSEVVSTNFRDASGPAMTEIGEQPWGREFALRDPAGNCVHFVAE 121
                                     9        19        29        39        49        59        69        79        89        99       109       119
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 1)

Asymmetric Unit
(-)
Class: Alpha and beta proteins (a+b) (23004)

(-) CATH Domains  (1, 1)

Asymmetric Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 1BYL)

(-) Gene Ontology  (2, 2)

Asymmetric Unit(hide GO term definitions)
Chain A   (BLE_STRHI | P17493)
molecular function
    GO:0008144    drug binding    Interacting selectively and non-covalently with a drug, any naturally occurring or synthetic substance, other than a nutrient, that, when administered or applied to an organism, affects the structure or functioning of the organism; in particular, any such substance used in the diagnosis, prevention, or treatment of disease.
biological process
    GO:0046677    response to antibiotic    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an antibiotic stimulus. An antibiotic is a chemical substance produced by a microorganism which has the capacity to inhibit the growth of or to kill other microorganisms.

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 Related Entries

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        BLE_STRHI | P17493: 1xrk 2zhp

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